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Report for CCDS92525.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92525.1 Public Homo sapiens 19 ZNF433 24 110 108 CCDS HistoryNCBI Gene:163059Re-query CCDS DB by CCDS ID:92525.1Re-query CCDS DB by GeneID:163059See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92525.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000550507.7 ENSP00000448099.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000550507.7Link to Ensembl Protein Viewer:ENSP00000448099.2Re-query CCDS DB by Nucleotide ID:ENST00000550507Re-query CCDS DB by Protein ID:ENSP00000448099
Original member Current member NCBI NM_001308348.2 NP_001295277.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001308348.2Link to Protein Sequence:NP_001295277.1Re-query CCDS DB by Nucleotide ID:NM_001308348Re-query CCDS DB by Protein ID:NP_001295277Link to BLAST:NP_001295277.1

Chromosomal Locations for CCDS 92525.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12014845 12016666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12017876 12017936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12018166 12018292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12035537 12035539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2013 nt):
ATGGATTCAGTGGCCTTTGAGGATGTGGCTGTGACCTTCACCCAAGAGGAGTGGGCTTTGCTGGATCCTT
CCCAGAAAAATCTCTGTAGAGATGTGATGCAAGAAACCTTCAGGAACCTGGCCTCTATAGGGAAAAAATG
GAAACCCCAGAACATATATGTAGAGTACGAAAATCTAAGGAGAAACCTAAGAATTGTGGGAGAGAGACTC
TTTGAAAGTAAAGAAGGTCATCAGCATGGAGAAATTTTGACCCAGGTTCCAGATGACATGCTGAAGAAAA
CAACTACTGGAGTAAAATCATGCGAAAGCAGTGTGTATGGAGAAGTAGGCAGTGCTCATTCATCTCTTAA
TAGGCACATCAGAGATGACACTGGACACAAGGCATATGAGTATCAAGAATATGGACAGAAACCATATAAA
TGTAAATACTGTAAAAAACCTTTCAACTGTCTCTCCTCTGTTCAGACACATGAAAGGGCTCATAGTGGAA
GGAAACTCTATGTTTGTGAGGAATGCGGAAAAACATTTATTTCCCATTCAAACCTTCAAAGACACAGGAT
AATGCACCGTGGAGATGGACCTTATAAGTGTAAATTTTGTGGGAAAGCCTTGATGTTTCTCAGTTTGTAT
CTTATCCACAAACGAACTCACACTGGAGAGAAACCATATCAATGTAAACAGTGTGGTAAAGCCTTTAGTC
ATTCTAGTAGCCTTCGAATACATGAAAGAACTCACACTGGGGAGAAGCCTTATAAATGTAATGAATGTGG
GAAAGCATTCCATAGTTCCACATGCCTTCATGCTCATAAAAGAACTCACACTGGGGAGAAGCCATATGAA
TGTAAACAGTGTGGGAAAGCCTTCAGCTCTTCCCATTCCTTTCAAATACATGAAAGAACTCACACGGGGG
AGAAGCCATATGAATGTAAGGAATGTGGAAAAGCATTCAAGTGTCCCAGTTCTGTTCGCAGACATGAAAG
AACCCACTCTAGGAAAAAACCCTATGAATGTAAACATTGTGGGAAAGTATTATCTTATCTTACCAGCTTT
CAAAACCACTTGGGAATGCACACTGGAGAGATATCTCATAAATGTAAGATATGTGGGAAAGCCTTTTATT
CTCCCAGTTCACTTCAAACACATGAAAAAACTCACACTGGAGAGAAACCCTATAAATGCAACCAATGTGG
TAAAGCCTTTAATTCTTCCAGTTCCTTCCGATATCATGAAAGAACTCACACTGGAGAGAAACCTTACGAG
TGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACTCCTTCAAACACATGGTAGGACTCACACGGGAG
AGAAACCCTATGCATGTAAGGAATGTGGAAAACCATTTAGTAATTTCTCTTTCTTTCAAATACATGAAAG
GATGCACAGAGAAGAGAAGCCGTATGAATGTAAGGGTTATGGGAAAACATTCAGTTTGCCCAGTTTATTT
CATAGACATGAAAGGACTCACACTGGAGGAAAAACCTATGAATGCAAGCAGTGTGGCAGATCCTTCAACT
GTTCGAGCTCCTTTCGATATCATGGAAGGACTCACACTGGAGAGAAACCCTATGAATGCAAGCAATGTGG
AAAAGCCTTCAGATCTGCCTCACAGCTTCAAATTCATGGAAGGACTCACACTGGAGAGAAACCTTATGAA
TGTAAGCAGTGTGGGAAAGCCTTTGGATCTGCCTCACACCTTCAAATGCATGGAAGGACTCACACTGGAG
AGAAACCCTATGAATGTAAGCAGTGTGGGAAGTCTTTTGGATGTGCCTCGCGACTTCAAATGCATGGAAG
GACTCACACTGGAGAGAAACCGTATAAATGTAAGCAATGTGGGAAAGCTTTTGGATGTCCCTCAAACCTT
CGAAGGCATGGAAGGACTCACACTGGAGAGAAACCCTATAAATGTAACCAATGTGGTAAAGTCTTTAGAT
GTTCTTCACAACTTCAAGTGCATGGAAGGGCTCACTGCATAGACACCCCATAA

Translation (670 aa):
MDSVAFEDVAVTFTQEEWALLDPSQKNLCRDVMQETFRNLASIGKKWKPQNIYVEYENLRRNLRIVGERL
FESKEGHQHGEILTQVPDDMLKKTTTGVKSCESSVYGEVGSAHSSLNRHIRDDTGHKAYEYQEYGQKPYK
CKYCKKPFNCLSSVQTHERAHSGRKLYVCEECGKTFISHSNLQRHRIMHRGDGPYKCKFCGKALMFLSLY
LIHKRTHTGEKPYQCKQCGKAFSHSSSLRIHERTHTGEKPYKCNECGKAFHSSTCLHAHKRTHTGEKPYE
CKQCGKAFSSSHSFQIHERTHTGEKPYECKECGKAFKCPSSVRRHERTHSRKKPYECKHCGKVLSYLTSF
QNHLGMHTGEISHKCKICGKAFYSPSSLQTHEKTHTGEKPYKCNQCGKAFNSSSSFRYHERTHTGEKPYE
CKQCGKAFRSASLLQTHGRTHTGEKPYACKECGKPFSNFSFFQIHERMHREEKPYECKGYGKTFSLPSLF
HRHERTHTGGKTYECKQCGRSFNCSSSFRYHGRTHTGEKPYECKQCGKAFRSASQLQIHGRTHTGEKPYE
CKQCGKAFGSASHLQMHGRTHTGEKPYECKQCGKSFGCASRLQMHGRTHTGEKPYKCKQCGKAFGCPSNL
RRHGRTHTGEKPYKCNQCGKVFRCSSQLQVHGRAHCIDTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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