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Report for CCDS9265.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9265.1 Public Homo sapiens 12 GLT1D1 24 110 108 CCDS HistoryNCBI Gene:144423Re-query CCDS DB by CCDS ID:9265.1Re-query CCDS DB by GeneID:144423See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9265.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281703.11 ENSP00000281703.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281703.11Link to Ensembl Protein Viewer:ENSP00000281703.6Re-query CCDS DB by Nucleotide ID:ENST00000281703Re-query CCDS DB by Protein ID:ENSP00000281703
Original member Current member NCBI NM_144669.3 NP_653270.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144669.3Link to Protein Sequence:NP_653270.1Re-query CCDS DB by Nucleotide ID:NM_144669Re-query CCDS DB by Protein ID:NP_653270Link to BLAST:NP_653270.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653270.1 266 Q96MS3-2 266 100% 0 0

Chromosomal Locations for CCDS 9265.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 128853582 128853649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 128875914 128876062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 128888639 128888744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 128899236 128899287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 128945326 128945369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 128947338 128947458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 128957545 128957643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 128982929 128983090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGCGGCTCCTGTTCCTGGCGGTGCTGCGGCCACACACCGGCAACGCGGTCACGGCCCAGCGCGTTCGGG
CCCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAAGGATGCCTTTGACTTTGAAAGCCGATCTGAGAT
TGCAAACCTCATCTTGGCTGAGAACTGCGAGGCTGCCCTGGCTCTTCATCTCTATAGGGGAGGCAGGCTT
TTGCAAGGCCACCGAATCCCTTTTGGAGTCATCTTTGGTGGAACTGATGTAAATGAAGATGCCAACCAGG
CGGAAAAAAACACAGTCATGGGCAGAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAAT
GAAGGAAATGGCACAAGCGCAGTGGGTCGATCCAGTGTTTACAAGGGAAGTGAAAGCCAAAGTGAAAAGA
GCCGCTGGGGTACGATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCGGTGGTGAAGAATTGCTTCG
CGGTGGTGAATAGCTCTGTCTCTGAAGGCATGTCAGCTGCAATTTTGGAGGCAATGGATTTAGAAGTACC
GGTATTGGCCAGGAACATCCCCGGGAATGCTGCCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTTCC
AATCCTCAGGAGTTTGTTCATCTGGCAAAGAGACTGGTTAGTGATCCTGCATTAGAAAAGGAAATCGTAG
TGAACGGAAGGGAATACGTGAGAATGTATCATTCATGGCAGGTGGAAAGAGACACCTACCAACAGCTCAT
CAGGAAGCTGGAAGGAAGCACTGAAGATTGA

Translation (266 aa):
MRLLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEIANLILAENCEAALALHLYRGGRL
LQGHRIPFGVIFGGTDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEMAQAQWVDPVFTREVKAKVKR
AAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILEAMDLEVPVLARNIPGNAAVVKHEVTGLLFS
NPQEFVHLAKRLVSDPALEKEIVVNGREYVRMYHSWQVERDTYQQLIRKLEGSTED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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