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Report for CCDS92720.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92720.1 Public Homo sapiens 2 ASXL2 24 110 108 CCDS HistoryNCBI Gene:55252Re-query CCDS DB by CCDS ID:92720.1Re-query CCDS DB by GeneID:55252See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92720.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435504.9 ENSP00000391447.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000435504.9Link to Ensembl Protein Viewer:ENSP00000391447.3Re-query CCDS DB by Nucleotide ID:ENST00000435504Re-query CCDS DB by Protein ID:ENSP00000391447
Original member Current member NCBI NM_018263.6 NP_060733.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018263.6Link to Protein Sequence:NP_060733.4Re-query CCDS DB by Nucleotide ID:NM_018263Re-query CCDS DB by Protein ID:NP_060733Link to BLAST:NP_060733.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060733.4 1435 Q76L83-1 1435 100% 0 0

Chromosomal Locations for CCDS 92720.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25742029 25744476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25749696 25750413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25753534 25753639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25756018 25756114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25759482 25759645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25767583 25767726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25768742 25768868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25771440 25771540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25799385 25799535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25806229 25806337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25835538 25835540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25845481 25845563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25878166 25878222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4308 nt):
ATGAGGGAAAAGGGACGTAGGAAGAAGGGCAGGACCTGGGCGGAGGCCGCCAAGACGGTCTTAGAAAAAT
ACCCCAATACACCCATGAGTCATAAAGAAATTCTTCAAGTTATCCAGAGAGAAGGACTAAAAGAAATCAG
AAGTGGGACTTCTCCTCTTGCATGCCTGAATGCAATGCTTCACACAAACTCCAGAGGTGAAGAGGGCATC
TTCTATAAGGTTCCAGGTAGAATGGGAGTATATACTTTGAAGAAAGATGTGCCGGATGGGGTGAAAGAGC
TGTCAGAAGGTTCAGAAGAAAGCAGTGATGGTCAGTCAGATTCCCAGAGTTCTGAGAACAGCAGCAGCAG
CAGTGATGGTGGCAGCAACAAGGAGGGAAAAAAGAGCAGGTGGAAAAGGAAAGTATCGTCGTCCTCCCCG
CAGTCAGGCTGCCCATCACCCACCATTCCAGCAGGTAAAGTCATTTCTCCATCACAGAAGCACAGCAAGA
AGGCACTAAAGCAGGCGCTAAAGCAGCAACAGCAGAAGAAGCAGCAGCAGCAATGCAGGCCAAGCATATC
CATCTCCTCCAACCAGCATCTCTCACTAAAGACTGTCAAAGCAGCCAGTGACTCTGTACCTGCCAAACCT
GCAACATGGGAAGGAAAGCAATCTGATGGACAGACAGGCAGCCCTCAAAACTCAAACTCCAGCTTTTCTT
CCTCAGTTAAAGTGGAAAATACTTTACTAGGCTTGGGGAAGAAGTCATTCCAGAGATCTGAGAGACTCCA
TACCAGACAAATGAAAAGAACTAAATGTGCTGACATTGACGTTGAGACACCGGACTCCATTCTGGTTAAT
ACAAATCTGCGAGCACTGATCAACAAGCACACATTTTCAGTCCTTCCTGGAGATTGCCAGCAACGACTGC
TTTTACTACTCCCAGAGGTAGATCGACAGGTTGGTCCAGATGGTTTAATGAAGTTAAATGGCTCAGCCCT
TAACAATGAATTCTTCACTTCAGCAGCCCAAGGCTGGAAGGAAAGACTCTCAGAAGGTGAGTTTACACCT
GAGATGCAGGTGAGAATTCGACAAGAGATTGAGAAGGAGAAAAAAGTGGAGCCATGGAAAGAACAATTCT
TTGAAAGCTACTATGGGCAGAGTTCTGGCCTGAGCCTTGAAGATTCTAAGAAATTGACAGCTTCTCCCAG
TGATCCCAAAGTAAAGAAAACCCCAGCTGAACAACCAAAATCCATGCCTGTGTCAGAGGCCTCTCTTATC
AGAATAGTTCCAGTAGTCTCCCAGTCAGAGTGTAAAGAAGAAGCATTGCAAATGTCATCACCAGGCAGAA
AAGAAGAGTGTGAAAGCCAAGGTGAAGTGCAGCCGAACTTCTCCACATCTTCAGAGCCCCTGCTTTCCTC
AGCTCTCAATACACATGAGCTTAGCAGCATTCTTCCCATCAAGTGCCCAAAGGATGAGGATCTCTTGGAG
CAGAAGCCAGTCACCTCTGCTGAACAGGAATCTGAGAAGAACCATCTCACCACAGCTTCTAATTATAACA
AAAGTGAAAGCCAAGAATCTTTAGTTACATCGCCAAGCAAACCCAAGAGTCCTGGGGTTGAAAAACCAAT
AGTGAAGCCCACAGCAGGAGCGGGTCCACAGGAGACTAATATGAAAGAACCTCTAGCAACTCTTGTTGAT
CAGAGCCCAGAAAGCCTCAAGAGGAAGTCTTCCCTCACCCAAGAAGAGGCCCCTGTGAGCTGGGAGAAGA
GGCCACGTGTCACTGAGAATCGCCAGCACCAGCAGCCATTTCAGGTCTCACCACAGCCCTTTCTCAATAG
AGGGGACAGAATCCAGGTGCGAAAAGTACCACCTCTCAAGATCCCGGTCTCCAGAATCTCCCCCATGCCG
TTTCATCCATCGCAGGTCTCTCCCAGGGCTCGTTTTCCAGTCTCCATCACTAGTCCTAACAGAACAGGAG
CCAGAACTCTTGCAGACATCAAAGCAAAAGCCCAACTGGTCAAAGCACAGAGGGCAGCAGCTGCCGCTGC
CGCCGCAGCTGCTGCAGCCGCCTCAGTTGGAGGGACCATTCCAGGACCTGGCCCAGGGGGTGGACAAGGT
CCAGGAGAGGGTGGTGAAGGGCAGACTGCTAGAGGAGGCAGTCCAGGCTCAGACAGAGTCAGTGAAACTG
GAAAGGGCCCCACACTGGAACTGGCAGGAACTGGAAGCAGGGGAGGTACGAGAGAGCTTTTACCCTGTGG
TCCAGAGACTCAGCCCCAGTCTGAGACCAAGACCACCCCAAGCCAGGCACAGCCTCATAGTGTCTCTGGA
GCACAACTACAGCAAACCCCCCCAGTGCCTCCAACACCTGCCGTCAGTGGAGCATGCACAAGTGTCCCAT
CACCAGCCCACATAGAGAAATTGGATAATGAAAAACTGAACCCCACCAGAGCAACAGCCACAGTGGCCTC
TGTCAGCCATCCACAAGGGCCCAGTAGTTGCAGACAGGAGAAAGCACCTTCTCCAACAGGTCCTGCTCTA
ATCTCAGGTGCCTCACCTGTTCATTGTGCAGCTGATGGCACAGTTGAGCTCAAAGCAGGTCCTAGTAAGA
ATATACCTAACCCTTCAGCCTCATCAAAGACAGATGCTAGTGTGCCAGTGGCTGTAACTCCCTCCCCTTT
AACATCTTTATTGACCACAGCCACTTTAGAAAAGCTTCCTGTACCCCAGGTCAGTGCAACTACAGCACCT
GCTGGATCAGCTCCACCCTCGAGCACTTTGCCAGCAGCTTCTAGCCTTAAAACCCCAGGAACTTCTTTAA
ACATGAATGGACCCACTTTAAGACCAACCTCTAGTATCCCTGCTAATAATCCTTTAGTGACTCAGCTGCT
TCAAGGCAAAGATGTTCCCATGGAGCAAATTCTGCCTAAACCTCTCACCAAAGTTGAAATGAAAACGGTT
CCACTGACTGCAAAAGAGGAAAGGGGGATGGGAGCGCTCATAGCTACCAACACAACAGAAAATAGCACCA
GAGAGGAAGTTAATGAGAGACAGTCCCATCCAGCTACGCAGCAGCAGCTGGGCAAAACCTTGCAAAGTAA
GCAGCTCCCCCAGGTTCCAAGGCCCCTTCAGCTCTTTTCAGCTAAGGAGCTGAGGGACTCCAGCATTGAC
ACACACCAATACCACGAAGGACTAAGTAAAGCAACCCAAGATCAGATCCTTCAGACTCTCATTCAGAGGG
TTCGGAGGCAGAATCTTCTCTCAGTTGTGCCGCCCTCACAGTTCAACTTCGCTCACTCAGGTTTCCAGCT
GGAAGACATCTCCACAAGCCAGAGGTTCATGCTGGGTTTTGCTGGCAGAAGGACATCCAAACCTGCAATG
GCAGGGCACTACTTACTGAATATTTCTACCTACGGCCGGGGCTCAGAGAGCTTTAGGAGGACCCATTCTG
TAAACCCTGAAGATCGTTTTTGTCTAAGCAGCCCCACTGAAGCCTTGAAAATGGGATATACAGACTGTAA
AAATGCAACAGGAGAGAGTAGCAGCAGCAAAGAAGATGACACTGATGAGGAAAGTACTGGTGATGAGCAG
GAATCTGTCACAGTGAAAGAGGAGCCCCAGGTTTCCCAGAGTGCTGGCAAGGGTGACACAAGTTCAGGAC
CTCACAGCAGGGAAACTCTATCTACCAGTGATTGCTTAGCTAGCAAGAATGTGAAGGCTGAGATACCATT
GAATGAGCAAACCACTTTAAGTAAGGAGAATTACCTGTTCACTAGAGGCCAAACATTTGATGAAAAGACC
CTAGCCAGAGATTTAATTCAGGCAGCACAGAAGCAGATGGCTCATGCAGTGAGAGGTAAGGCAATCCGTA
GCAGCCCCGAGCTTTTCAGTTCTACTGTTCTTCCTCTGCCTGCAGACAGCCCCACCCACCAGCCCCTACT
CCTTCCACCCCTGCAAACCCCGAAGTTGTATGGAAGCCCCACCCAGATAGGGCCAAGCTATAGAGGCATG
ATCAATGTCTCCACCTCATCTGACATGGACCATAACTCTGCTGTACCAGGTAGCCAGGTATCTAGCAATG
TAGGTGATGTCATGTCATTTTCAGTGACTGTCACTACCATCCCTGCTAGCCAAGCTATGAATCCCAGCAG
CCATGGCCAGACCATTCCTGTTCAGGCGTTCTCCGAAGAGAACAGCATAGAGGGCACGCCTTCGAAATGT
TACTGCCGCTTGAAAGCCATGATCATGTGCAAAGGCTGTGGCGCTTTCTGCCATGATGATTGCATCGGCC
CCTCCAAACTGTGCGTCTCCTGCCTTGTCGTTCGGTAA

Translation (1435 aa):
MREKGRRKKGRTWAEAAKTVLEKYPNTPMSHKEILQVIQREGLKEIRSGTSPLACLNAMLHTNSRGEEGI
FYKVPGRMGVYTLKKDVPDGVKELSEGSEESSDGQSDSQSSENSSSSSDGGSNKEGKKSRWKRKVSSSSP
QSGCPSPTIPAGKVISPSQKHSKKALKQALKQQQQKKQQQQCRPSISISSNQHLSLKTVKAASDSVPAKP
ATWEGKQSDGQTGSPQNSNSSFSSSVKVENTLLGLGKKSFQRSERLHTRQMKRTKCADIDVETPDSILVN
TNLRALINKHTFSVLPGDCQQRLLLLLPEVDRQVGPDGLMKLNGSALNNEFFTSAAQGWKERLSEGEFTP
EMQVRIRQEIEKEKKVEPWKEQFFESYYGQSSGLSLEDSKKLTASPSDPKVKKTPAEQPKSMPVSEASLI
RIVPVVSQSECKEEALQMSSPGRKEECESQGEVQPNFSTSSEPLLSSALNTHELSSILPIKCPKDEDLLE
QKPVTSAEQESEKNHLTTASNYNKSESQESLVTSPSKPKSPGVEKPIVKPTAGAGPQETNMKEPLATLVD
QSPESLKRKSSLTQEEAPVSWEKRPRVTENRQHQQPFQVSPQPFLNRGDRIQVRKVPPLKIPVSRISPMP
FHPSQVSPRARFPVSITSPNRTGARTLADIKAKAQLVKAQRAAAAAAAAAAAAASVGGTIPGPGPGGGQG
PGEGGEGQTARGGSPGSDRVSETGKGPTLELAGTGSRGGTRELLPCGPETQPQSETKTTPSQAQPHSVSG
AQLQQTPPVPPTPAVSGACTSVPSPAHIEKLDNEKLNPTRATATVASVSHPQGPSSCRQEKAPSPTGPAL
ISGASPVHCAADGTVELKAGPSKNIPNPSASSKTDASVPVAVTPSPLTSLLTTATLEKLPVPQVSATTAP
AGSAPPSSTLPAASSLKTPGTSLNMNGPTLRPTSSIPANNPLVTQLLQGKDVPMEQILPKPLTKVEMKTV
PLTAKEERGMGALIATNTTENSTREEVNERQSHPATQQQLGKTLQSKQLPQVPRPLQLFSAKELRDSSID
THQYHEGLSKATQDQILQTLIQRVRRQNLLSVVPPSQFNFAHSGFQLEDISTSQRFMLGFAGRRTSKPAM
AGHYLLNISTYGRGSESFRRTHSVNPEDRFCLSSPTEALKMGYTDCKNATGESSSSKEDDTDEESTGDEQ
ESVTVKEEPQVSQSAGKGDTSSGPHSRETLSTSDCLASKNVKAEIPLNEQTTLSKENYLFTRGQTFDEKT
LARDLIQAAQKQMAHAVRGKAIRSSPELFSSTVLPLPADSPTHQPLLLPPLQTPKLYGSPTQIGPSYRGM
INVSTSSDMDHNSAVPGSQVSSNVGDVMSFSVTVTTIPASQAMNPSSHGQTIPVQAFSEENSIEGTPSKC
YCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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