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Report for CCDS9277.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9277.1 Public Homo sapiens 12 NOC4L 24 110 108 CCDS HistoryNCBI Gene:79050Re-query CCDS DB by CCDS ID:9277.1Re-query CCDS DB by GeneID:79050See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9277.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330579.6 ENSP00000328854.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330579.6Link to Ensembl Protein Viewer:ENSP00000328854.1Re-query CCDS DB by Nucleotide ID:ENST00000330579Re-query CCDS DB by Protein ID:ENSP00000328854
Original member Current member NCBI NM_024078.3 NP_076983.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024078.3Link to Protein Sequence:NP_076983.1Re-query CCDS DB by Nucleotide ID:NM_024078Re-query CCDS DB by Protein ID:NP_076983Link to BLAST:NP_076983.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076983.1 516 Q9BVI4 516 100% 0 0

Chromosomal Locations for CCDS 9277.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 132144489 132144605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132144854 132144974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132145559 132145665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132147281 132147388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132147633 132147782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132147880 132147979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132148072 132148106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132148609 132148659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132148784 132148895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132150981 132151041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132151258 132151368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132151484 132151644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132151738 132151820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132152084 132152197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132152282 132152401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1551 nt):
ATGGAGCGGGAGCCGGGCGCCGCGGGAGTTCGCCGGGCTCTGGGCCGCCGGCTGGAGGCGGTGCTGGCGA
GCCGCAGTGAGGCCAACGCCGTGTTCGACATCCTGGCCGTGCTGCAGTCTGAGGACCAGGAGGAGATCCA
GGAAGCAGTCCGCACGTGCAGCCGTCTTTTCGGGGCCTTGCTGGAGCGGGGAGAGCTGTTTGTGGGCCAG
CTGCCCTCTGAGGAGATGGTCATGACAGGGTCCCAGGGAGCCACACGGAAGTACAAGGTGTGGATGAGAC
ACCGCTATCACAGCTGCTGCAATCGCTTGGGAGAGCTCCTGGGCCACCCCTCCTTTCAGGTCAAGGAGCT
GGCCCTCAGCGCACTCCTGAAGTTCGTGCAGCTGGAAGGAGCGCACCCCCTGGAGAAGTCCAAGTGGGAA
GGCAACTACCTGTTCCCCCGAGAGCTCTTCAAGTTGGTGGTGGGAGGCCTGCTGTCTCCTGAGGAGGACC
AGAGCCTGCTCCTGTCCCAGTTCCGGGAGTACCTGGACTACGACGACACCCGCTACCACACCATGCAGGC
AGCCGTGGATGCCGTGGCCCGGGTCACTGGCCAGCACCCCGAGGTGCCCCCCGCCTTTTGGAACAATGCC
TTCACGCTGCTGTCTGCCGTGAGCCTGCCCCGCCGGGAGCCCACCGTCTCCAGCTTCTATGTGAAGCGGG
CGGAGCTGTGGGACACCTGGAAGGTTGCTCACCTGAAGGAGCACAGGAGGGTTTTCCAGGCCATGTGGCT
CAGCTTCCTCAAGCACAAGCTGCCCCTCAGCCTCTACAAGAAGGTGCTGCTGATTGTGCATGACGCCATC
CTGCCGCAGCTGGCGCAGCCCACGCTCATGATCGACTTCCTCACCCGCGCCTGCGACCTCGGGGGGGCCC
TCAGCCTCTTGGCCTTGAACGGGCTGTTCATCTTGATTCACAAACACAACCTGGAGTACCCTGACTTCTA
CCGGAAGCTCTACGGCCTCTTGGACCCCTCTGTCTTTCACGTCAAGTACCGCGCCCGCTTCTTCCACCTG
GCTGACCTCTTCCTGTCCTCCTCCCACCTCCCCGCCTACCTGGTGGCCGCCTTCGCCAAGCGGCTGGCCC
GCCTGGCCCTGACGGCTCCCCCTGAGGCCCTGCTCATGGTCCTGCCTTTCATCTGTAACCTGCTGCGCCG
GCACCCTGCCTGCCGGGTCCTCGTGCACCGTCCACACGGCCCTGAGTTGGACGCCGACCCCTACGACCCT
GGAGAGGAGGACCCAGCCCAGAGCCGGGCCTTGGAGAGCTCCCTGTGGGAGCTTCAGGCCCTCCAGCGCC
ACTACCACCCTGAGGTGTCCAAAGCCGCCAGCGTCATCAACCAGGCCCTGTCCATGCCTGAGGTCAGCAT
CGCGCCACTGCTGGAGCTCACGGCCTACGAGATCTTTGAGCGGGACCTGAAGAAGAAGGGGCCCGAGCCG
GTGCCACTGGAGTTTATCCCAGCCCAGGGCCTGCTGGGACGGCCGGGTGAACTCTGTGCCCAGCACTTCA
CGCTCAGCTGA

Translation (516 aa):
MEREPGAAGVRRALGRRLEAVLASRSEANAVFDILAVLQSEDQEEIQEAVRTCSRLFGALLERGELFVGQ
LPSEEMVMTGSQGATRKYKVWMRHRYHSCCNRLGELLGHPSFQVKELALSALLKFVQLEGAHPLEKSKWE
GNYLFPRELFKLVVGGLLSPEEDQSLLLSQFREYLDYDDTRYHTMQAAVDAVARVTGQHPEVPPAFWNNA
FTLLSAVSLPRREPTVSSFYVKRAELWDTWKVAHLKEHRRVFQAMWLSFLKHKLPLSLYKKVLLIVHDAI
LPQLAQPTLMIDFLTRACDLGGALSLLALNGLFILIHKHNLEYPDFYRKLYGLLDPSVFHVKYRARFFHL
ADLFLSSSHLPAYLVAAFAKRLARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPHGPELDADPYDP
GEEDPAQSRALESSLWELQALQRHYHPEVSKAASVINQALSMPEVSIAPLLELTAYEIFERDLKKKGPEP
VPLEFIPAQGLLGRPGELCAQHFTLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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