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Report for CCDS92776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92776.1 Public Homo sapiens 2 RAB11FIP5 24 110 108 CCDS HistoryNCBI Gene:26056Re-query CCDS DB by CCDS ID:92776.1Re-query CCDS DB by GeneID:26056See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92776.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000486777.7 ENSP00000489752.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000486777.7Link to Ensembl Protein Viewer:ENSP00000489752.1Re-query CCDS DB by Nucleotide ID:ENST00000486777Re-query CCDS DB by Protein ID:ENSP00000489752
Original member Current member NCBI NM_001371272.1 NP_001358201.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001371272.1Link to Protein Sequence:NP_001358201.1Re-query CCDS DB by Nucleotide ID:NM_001371272Re-query CCDS DB by Protein ID:NP_001358201Link to BLAST:NP_001358201.1

Chromosomal Locations for CCDS 92776.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 73075521 73075724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73075993 73076182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73079651 73081663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73088050 73088749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73088879 73089315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73112347 73112777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3975 nt):
ATGGCCCTGGTGCGGGGCGCGGAGCCGGCGGCGGGGCCTTCCCGCTGGCTGCCCACGCACGTCCAGGTGA
CGGTGCTGCGGGCCCGCGGGCTGCGGGGCAAGAGCTCGGGAGCGGGCAGCACCAGCGACGCGTACACGGT
GATCCAGGTGGGCCGCGAGAAGTACAGTACGTCGGTGGTGGAGAAGACGCACGGCTGCCCCGAGTGGCGT
GAGGAGTGCTCCTTCGAGCTGCCGCCGGGGGCCCTGGATGGCCTGCTGCGGGCGCAGGAGGCCGACGCGG
GCCCGGCGCCCTGGGCCGCGAGCTCCGCCGCCGCCTGCGAGCTGGTGCTCACCACCATGCACCGCTCGCT
CATCGGCGTCGACAAGTTCCTGGGCCAGGCCACGGTGGCGCTGGACGAGGTCTTCGGCGCAGGCCGCGCC
CAGCACACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAG
TCACCATCCAGTTCACGCGCAACAACCTGAGCGCCAGTATGTTTGACCTGTCCATGAAGGACAAGCCAAG
GTCTCCCTTCAGCAAGATCAGGGACAAGATGAAGGGCAAGAAGAAGTATGATCTGGAATCTGCCTCTGCC
ATCCTCCCAAGCAGCGCCATAGAGGATCCTGACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCT
TCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCAC
CCTGTCCTCAGCCAGCGGGAGCTTGGCCTACCAGGGACCTGGCGCCGAACTCCTCACCCGCTCACCAAGC
CGTAGCAGCTGGCTGTCCACTGAAGGGGGCAGGGACTCTGCACAGTCCCCCAAGCTGTTCACCCATAAGA
GGACCTACAGCGATGAGGCCAACCAGATGCGAGTGGCTCCTCCTCGGGCCCTTCTGGACCTTCAGGGCCA
CCTGGATGCTGCCTCCCGCTCTTCGCTCTGTGTCAATGGGAGCCACATTTACAATGAGGAGCCCCAGGGC
CCTGTGCGGCACCGCAGCTCCATCTCGGGCTCGCTTCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCC
GGTTCTCCGAGGAGGGGCCTCGTTCCACAGATGACACCTGGCCCAGAGGCAGTCGTAGCAACAGCAGCTC
AGAGGCAGTGCTTGGACAGGAGGAGCTGAGTGCTCAGGCTAAAGTCCTGGCCCCTGGGGCCAGCCACCCT
GGAGAGGAGGAGGGGGCCCGGCTACCAGAGGGCAAGCCAGTCCAGGTTGCCACACCCATAGTGGCCTCCT
CTGAGGCTGTGGCAGAGAAGGAGGGAGCCCGGAAGGAGGAACGCAAGCCCCGGATGGGTCTCTTCCACCA
CCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGAAGCTCTCTGGGGGAAAAGGGGGGTCCCATC
CTGGGGGCCTCCCCACATCACTCATCCAGTGGGGAGGAAAAGGCCAAGAGTAGCTGGTTTGGCTTGAGAG
AAGCCAAGGACCCGACTCAGAAACCCAGCCTGGACGTGTCTCCTCAGGTAGAATCTGACCCAGCTGCTCT
TCCTCACCACCTCCCCTGCTCCCCCTGGGCTCCGGCCCCTCCCACTCCTGCTCCCACTGCTGCTCCCATG
CTAAGCACTAACCTTTTTGCAGCCGCCTCCCCCGCTGCTGCCACTGCTGCCGCTGCCGCCACCACCGCCG
CCCCTGAAGCCACCCCACCTGGATTATTGGGTCTTACCAACCCGTTCCTCACCTCTTTGCAGAGCAACCC
CTTCTTCGAGGAGCTCATAGCCGACATAGCACTAAACTCTCCTTCACCTGCTCCCTCTCTCCCCAGTGCC
TCGAGGGCCAGCCCCACCCCCCTGGCCTCCCCTGGGAAAGCCCTGCCTGAGTGGGACAACACCTTCAACG
TCTTTGCTGCCAGCAGGCTGCGTCCAGAGGCCAGGAGCGAGATCCTGGCCCCTGCAGGAGTGGGGCTGGA
GGCGGCAGGGCTGCAAGACCCAGGCCCTGGGGCCATGACTGCGAAGGCAGCTGAGCCCCAGGGAGAGCCT
GGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTGGGAGCAGCGTGTGGCTGGAGCCCAGGG
TTCCTCTGGACTTGGGACCGAACCACCAGAGCGCGAGCGCGGCTGACCCAGGGCTCCTCGGGTCGGTAGG
GGCTGGCCTGCCCTCCTCGTCAGCCCAGCTACAGCTGAGAGCCTCAGGCTCAGAACCAGACAGGGAACTG
CCAGCCCCGGAAGTGGAAGCAGGGCAGAGTCCGGCAGACAGTGGGACATCTCTATTTAGCTCCCCAGAAG
TGATCAGTGTGTGGGAGAGGCTGCCGGGCCCAGAGAGCGCTGCTGAGGGCCAGGACGATGAGTCCTCCCG
AGGCGAAAATCAGCTTTGCCCTGACGTCGAGACAGCTGATGATGCCTGGCCTTGGGATGTGGTCACCATT
TCTCCTGCAGCTGAGACAGCCTCACTAGTCTTTCGGGGAGAGTCTGATGAGCCTGCTCCCCAGGTGCAGC
CTGAATCACCAGAAACTGTGAGCCCCAAGGGGAGCGAGGGGCTTCCCCCACCGGAGCCCGAGCCTAAACC
CGAGTGGGTGTCTGACAAGGGGCTGCAGCCCAGCACCCCACCTCCCAAGCCACCGCGCCTCTTCACACCC
TCAAGATCCCAGGAGGAGGAGGAGGAGAAGGCCGCAGTGGGGCTGAGTAACAGGGGGCCGGAGACAGAGG
GAGAAGATGCCTCCCCAAGTGCACTGGTTGTCGGTCCCCCGGAGACCAAGGAGGAGGGAGAGAAGCGTGA
GTCGGAGGAGTCTGACAGCTGCTCCTCTGCAACCCTGCTGGGCCAGCCTGGCCTGGAAGAGCTAGTGGAG
GATGCCAGCCCCCCTGTGTCTGGGCCCTGCCTGTCTGCACCCGCCAGCTGCCCTGAGGGTCCTGCCCCCA
TACCCTGTCACTCAAAGAGCTTGGCTCTTCAGAGTCAGCACATCTGGGGGACTCCAGAGGTTGGAGAAGG
CCCTGAGGCTCCTGAGGCCCAGGGCCAGGATCCAGTAGGAGAGGGGCTTGGGTCCTTGTCAGCCACCTCC
CAGCAGGCTGATGTGTGGGTCTCCAAGGAAGATGCCTTGAACCCCTTCTTGTTTCAGGGGAGCCGAGATC
CTCCCAGCCTCTCATCTGCATCCCCGCCAGGGTCGAGGGAATCTTCTATTCATTCTGGTCCAGAAGAGCT
GCCCACTCCCCCAGAGCCTGACTTTCCACCGCCCCCTCTCCCGCCTTGGGCCAGCCACCACCGTGGGGGG
CCCAGCCCTCCATGCTCTCCCCTGTCTGAAGCCTGGCCCCTGACTACCTCCTCTGCACCACCAGGGGAGC
CAGCCTTACTCCCTGGCCCCCATGAGCCCTCCCCACCTGGGGGCTCCCCTGCCCTACTTAGGGAGGACCT
CGCTGCAGCCACCCCAGCCTCCCCGCTTGTGCTTCTGCCCTTGGAGACACGACCAGCTGAGGAGCCACAG
CCCAGTGCCAGTCCCCACCCCGTGAAGCCCCTCAGTGCCGCCCCTGTGGAGGGCAGCCCCGACAGGAAGC
AGTCCCGCTCCAGTCTGAGCATAGCCCTGAGCAGTGGGCTGGAGAAGCTCAAAACAGTCACATCTGGGAG
CATTCAGCCTGTGACCCAGGCCCCCCAGGCTGGCCAGATGGTGGACACCAAAAGGCTGAAGGACTCAGCT
GTGCTGGACCAGTCGGCCAAGTACTACCACCTGACCCACGATGAGCTCATCAGCCTGCTCCTGCAGCGGG
AGCGGGAGCTGAGCCAGCGGGACGAGCATGTGCAGGAGCTGGAGAGCTACATCGACCGGCTGCTGGTGCG
GATCATGGAGACCTCACCCACGCTGCTGCAGATCCCCCCGGGCCCCCCCAAATAG

Translation (1324 aa):
MALVRGAEPAAGPSRWLPTHVQVTVLRARGLRGKSSGAGSTSDAYTVIQVGREKYSTSVVEKTHGCPEWR
EECSFELPPGALDGLLRAQEADAGPAPWAASSAAACELVLTTMHRSLIGVDKFLGQATVALDEVFGAGRA
QHTQWYKLHSKPGKKEKERGEIEVTIQFTRNNLSASMFDLSMKDKPRSPFSKIRDKMKGKKKYDLESASA
ILPSSAIEDPDLGSLGKMGKAKGFFLRNKLRKSSLTQSNTSLGSDSTLSSASGSLAYQGPGAELLTRSPS
RSSWLSTEGGRDSAQSPKLFTHKRTYSDEANQMRVAPPRALLDLQGHLDAASRSSLCVNGSHIYNEEPQG
PVRHRSSISGSLPSSGSLQAVSSRFSEEGPRSTDDTWPRGSRSNSSSEAVLGQEELSAQAKVLAPGASHP
GEEEGARLPEGKPVQVATPIVASSEAVAEKEGARKEERKPRMGLFHHHHQGLSRSELGRRSSLGEKGGPI
LGASPHHSSSGEEKAKSSWFGLREAKDPTQKPSLDVSPQVESDPAALPHHLPCSPWAPAPPTPAPTAAPM
LSTNLFAAASPAAATAAAAATTAAPEATPPGLLGLTNPFLTSLQSNPFFEELIADIALNSPSPAPSLPSA
SRASPTPLASPGKALPEWDNTFNVFAASRLRPEARSEILAPAGVGLEAAGLQDPGPGAMTAKAAEPQGEP
GGGGGGGGGGGGRGGSSVWLEPRVPLDLGPNHQSASAADPGLLGSVGAGLPSSSAQLQLRASGSEPDREL
PAPEVEAGQSPADSGTSLFSSPEVISVWERLPGPESAAEGQDDESSRGENQLCPDVETADDAWPWDVVTI
SPAAETASLVFRGESDEPAPQVQPESPETVSPKGSEGLPPPEPEPKPEWVSDKGLQPSTPPPKPPRLFTP
SRSQEEEEEKAAVGLSNRGPETEGEDASPSALVVGPPETKEEGEKRESEESDSCSSATLLGQPGLEELVE
DASPPVSGPCLSAPASCPEGPAPIPCHSKSLALQSQHIWGTPEVGEGPEAPEAQGQDPVGEGLGSLSATS
QQADVWVSKEDALNPFLFQGSRDPPSLSSASPPGSRESSIHSGPEELPTPPEPDFPPPPLPPWASHHRGG
PSPPCSPLSEAWPLTTSSAPPGEPALLPGPHEPSPPGGSPALLREDLAAATPASPLVLLPLETRPAEEPQ
PSASPHPVKPLSAAPVEGSPDRKQSRSSLSIALSSGLEKLKTVTSGSIQPVTQAPQAGQMVDTKRLKDSA
VLDQSAKYYHLTHDELISLLLQRERELSQRDEHVQELESYIDRLLVRIMETSPTLLQIPPGPPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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