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Report for CCDS92780.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
92780.1 |
Public |
Homo sapiens |
2 |
TET3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:200424](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:92780.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:200424](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 92780.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000305799.8 |
ENSP00000307803.8 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000305799.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000307803.8](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000305799](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000307803](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001366022.1 |
NP_001352951.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001366022.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001352951.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001366022](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001352951](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001352951.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 92780.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5109 nt): ATGCACCAGAGGAGGCCGGCCGAGGTGGAAATAAAGGCTGGTGAAGGAGCCGGGCCGTGGGGACAAGGAG CGGCTGTCAAGACAGGCTCAGAGCTCAGCCCAGTTGATGGACCTGTTCCAGGTCAGATGGACTCAGGGCC AGTGTACCATGGGGACTCACGGCAGCTAAGCGCCTCAGGGGTGCCGGTCAATGGTGCTAGAGAGCCCGCT GGACCCAGTCTGCTGGGGACTGGGGGTCCTTGGCGGGTAGACCAAAAGCCCGACTGGGAGGCTGCCCCAG GCCCAGCTCATACTGCTCGCCTGGAAGATGCCCACGATCTGGTGGCCTTTTCGGCTGTGGCCGAAGCTGT GTCCTCTTATGGGGCCCTTAGCACCCGGCTCTATGAAACCTTCAACCGTGAGATGAGTCGTGAGGCTGGG AACAACAGCAGGGGACCCCGGCCAGGGCCTGAGGGCTGCTCTGCTGGCAGCGAAGACCTTGACACACTGC AGACGGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCC TGACTACCTCGAGTGGCTGGAGGGGAAGATCAAGTCTGTGGTCATGGAAGGAGGGGAGGAGCGGCCCAGG CTCCCAGGGCCTCTGCCTCCTGGTGAGGCCGGCCTCCCAGCACCAAGCACCAGGCCACTCCTCAGCTCAG AGGTGCCCCAGATCTCTCCCCAAGAGGGCCTGCCCCTGTCCCAGAGTGCCCTGAGCATTGCCAAGGAAAA AAACATCAGCTTGCAGACCGCCATTGCCATTGAGGCCCTCACACAGCTCTCCTCTGCCCTCCCGCAGCCT TCTCATTCCACCCCCCAGGCTTCTTGCCCCCTTCCTGAGGCCTTGTCACCTCCTGCCCCTTTCAGATCTC CCCAGTCTTACCTCCGGGCTCCCTCATGGCCTGTGGTTCCTCCTGAAGAGCACTCATCTTTTGCTCCTGA TAGCTCTGCCTTCCCTCCAGCAACTCCTAGAACTGAGTTCCCTGAAGCCTGGGGCACTGACACCCCTCCA GCAACGCCCCGGAGCTCCTGGCCCATGCCTCGCCCAAGCCCCGATCCCATGGCTGAACTGGAGCAGTTGT TGGGCAGCGCCAGTGATTACATCCAGTCAGTATTCAAGCGGCCTGAGGCCCTGCCTACCAAGCCCAAGGT CAAGGTGGAGGCACCCTCTTCCTCCCCGGCCCCGGCCCCATCCCCTGTACTTCAGAGGGAGGCTCCCACG CCATCCTCGGAGCCCGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCA GCCTCTTCCTAGAACAGGTGCACGACACCTCCTTCCCTGCTCCTTCAGAGCCTTCTGCTCCTGGCTGGTG GCCCCCACCAAGTTCACCTGTCCCACGGCTTCCAGACAGACCACCCAAGGAGAAGAAGAAGAAGCTCCCA ACACCAGCTGGAGGTCCCGTGGGAACGGAGAAAGCTGCCCCTGGGATCAAGCCCAGTGTCCGAAAGCCCA TTCAGATCAAGAAGTCCAGGCCCCGGGAAGCACAGCCCCTCTTCCCACCTGTCCGACAGATTGTCCTGGA AGGGCTTAGGTCCCCAGCCTCCCAGGAAGTGCAGGCTCATCCACCGGCCCCTCTGCCTGCCTCACAGGGC TCTGCTGTGCCCCTGCCCCCAGAACCTTCTCTTGCGCTATTTGCACCTAGTCCCTCCAGGGACAGCCTGC TGCCCCCTACTCAGGAAATGAGGTCCCCCAGCCCCATGACAGCCTTGCAGCCAGGCTCCACTGGCCCTCT TCCCCCTGCCGATGACAAGCTGGAAGAGCTCATCCGGCAGTTTGAGGCTGAATTTGGAGATAGCTTTGGG CTTCCCGGCCCCCCTTCTGTGCCCATTCAGGACCCCGAGAACCAGCAAACATGTCTCCCAGCCCCTGAGA GCCCCTTTGCTACCCGTTCCCCCAAGCAAATCAAGATTGAGTCTTCGGGGGCTGTGACTGTGCTCTCAAC CACCTGCTTCCATTCAGAGGAGGGAGGACAGGAGGCCACACCCACCAAGGCTGAGAACCCACTCACACCC ACCCTCAGTGGCTTCTTGGAGTCACCTCTTAAGTACCTGGACACACCCACCAAGAGTCTGCTGGACACAC CTGCCAAGAGAGCCCAGGCCGAGTTCCCCACCTGCGATTGCGTCGAACAAATAGTGGAGAAAGATGAAGG TCCATATTATACTCACTTGGGATCTGGCCCCACGGTCGCCTCTATCCGGGAACTCATGGAGGAGCGGTAT GGAGAGAAGGGGAAAGCCATCCGGATCGAGAAGGTCATCTACACGGGGAAGGAGGGAAAGAGCTCCCGCG GTTGCCCCATTGCAAAGTGGGTGATCCGCAGGCACACGCTGGAGGAGAAGCTACTCTGCCTGGTGCGGCA CCGGGCAGGCCACCACTGCCAGAACGCTGTGATCGTCATCCTCATCCTGGCCTGGGAGGGCATTCCCCGT AGCCTCGGAGACACCCTCTACCAGGAGCTCACCGACACCCTCCGGAAGTATGGGAACCCCACCAGCCGGA GATGCGGCCTCAACGATGACCGGACCTGCGCTTGCCAAGGCAAAGACCCCAACACCTGTGGTGCCTCCTT CTCCTTTGGTTGTTCCTGGAGCATGTACTTCAACGGCTGCAAGTATGCTCGGAGCAAGACACCTCGCAAG TTCCGCCTCGCAGGGGACAATCCCAAAGAGGAAGAAGTGCTCCGGAAGAGTTTCCAGGACCTGGCCACCG AAGTCGCTCCCCTGTACAAGCGACTGGCCCCTCAGGCCTATCAGAACCAGGTGACCAACGAGGAAATAGC GATTGACTGCCGTCTGGGGCTGAAGGAAGGACGGCCCTTCGCGGGGGTCACGGCCTGCATGGACTTCTGT GCCCACGCCCACAAGGACCAGCATAACCTCTACAATGGGTGCACCGTGGTCTGCACCCTGACCAAGGAAG ACAATCGCTGCGTGGGCAAGATTCCCGAGGATGAGCAGCTGCATGTTCTCCCCCTGTACAAGATGGCCAA CACGGATGAGTTTGGTAGCGAGGAGAACCAGAATGCAAAGGTGGGCAGCGGAGCCATCCAGGTGCTCACC GCCTTCCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCCTGCCGCCAGCGGCAGCTGGAAGCCA GAAAGGCAGCAGCCGAGAAGAAGAAGATTCAGAAGGAGAAGCTGAGCACTCCGGAGAAGATCAAGCAGGA GGCCCTGGAGCTGGCGGGCATTACGTCGGACCCAGGCCTGTCTCTGAAGGGTGGATTGTCCCAGCAAGGC CTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAACCACTTCAGCTCCTTCAAGTACAGCGGCAACGCGGTGG TGGAGAGCTACTCGGTGCTGGGCAACTGCCGGCCCTCCGACCCTTACAGCATGAACAGCGTGTACTCCTA CCACTCCTACTATGCACAGCCCAGCCTGACCTCCGTCAATGGCTTCCACTCCAAGTACGCTCTCCCGTCT TTTAGCTACTATGGCTTTCCATCCAGCAACCCCGTCTTCCCCTCTCAGTTCCTGGGTCCTGGTGCCTGGG GGCACAGTGGCAGCAGTGGCAGTTTTGAGAAGAAGCCAGACCTCCACGCTCTGCACAACAGCCTGAGCCC GGCCTACGGTGGTGCTGAGTTTGCCGAGCTGCCCAGCCAGGCTGTTCCCACAGACGCCCACCACCCCACT CCTCACCACCAGCAGCCTGCGTACCCAGGCCCCAAGGAGTATCTGCTTCCCAAGGCCCCCCTACTCCACT CAGTGTCCAGGGACCCCTCCCCCTTTGCCCAGAGCTCCAACTGCTACAACAGATCCATCAAGCAAGAGCC AGTAGACCCGCTGACCCAGGCTGAGCCTGTGCCCAGAGACGCTGGCAAGATGGGCAAGACACCTCTGTCC GAGGTGTCTCAGAATGGAGGACCCAGTCACCTTTGGGGACAGTACTCAGGAGGCCCAAGCATGTCCCCCA AGAGGACTAACGGTGTGGGTGGCAGCTGGGGTGTGTTCTCGTCTGGGGAGAGTCCTGCCATCGTCCCTGA CAAGCTCAGTTCCTTTGGGGCCAGCTGCCTGGCCCCTTCCCACTTCACAGATGGCCAGTGGGGGCTGTTC CCCGGTGAGGGGCAGCAGGCAGCTTCCCACTCTGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCA AGTTTGGGAACAGCACCTCGGCCTTGGCTGGGCCCAGCCTGACTGAGAAGCCGTGGGCGCTGGGGGCAGG GGATTTCAACTCGGCCCTGAAAGGTAGTCCTGGGTTCCAAGACAAGCTGTGGAACCCCATGAAAGGAGAG GAGGGCAGGATTCCAGCCGCAGGGGCCAGCCAGCTGGACAGGGCCTGGCAGTCCTTTGGTCTGCCCCTGG GATCCAGCGAGAAGCTGTTTGGGGCTCTGAAGTCAGAGGAGAAGCTGTGGGACCCCTTCAGCCTGGAGGA GGGGCCGGCTGAGGAGCCCCCCAGCAAGGGAGCGGTGAAGGAGGAGAAGGGCGGTGGTGGTGCGGAGGAG GAAGAGGAGGAGCTGTGGTCGGACAGTGAACACAACTTCCTGGACGAGAACATCGGCGGCGTGGCCGTGG CCCCAGCCCACGGCTCCATCCTCATCGAGTGTGCCCGGCGGGAGCTGCACGCCACCACGCCGCTTAAGAA GCCCAACCGCTGCCACCCCACCCGCATCTCGCTGGTCTTCTACCAGCACAAGAACCTCAACCAGCCCAAC CACGGGCTGGCCCTCTGGGAAGCCAAGATGAAGCAGCTGGCGGAGAGGGCACGGGCACGGCAGGAGGAGG CTGCCCGGCTGGGCCTGGGCCAGCAGGAGGCCAAGCTCTACGGGAAGAAGCGCAAGTGGGGGGGCACTGT GGTTGCTGAGCCCCAGCAGAAAGAGAAGAAGGGGGTCGTCCCCACCCGGCAGGCACTGGCTGTGCCCACA GACTCGGCGGTCACCGTGTCCTCCTATGCCTACACGAAGGTCACTGGCCCCTACAGCCGCTGGATCTAG
Translation (1702 aa): MHQRRPAEVEIKAGEGAGPWGQGAAVKTGSELSPVDGPVPGQMDSGPVYHGDSRQLSASGVPVNGAREPA GPSLLGTGGPWRVDQKPDWEAAPGPAHTARLEDAHDLVAFSAVAEAVSSYGALSTRLYETFNREMSREAG NNSRGPRPGPEGCSAGSEDLDTLQTALALARHGMKPPNCNCDGPECPDYLEWLEGKIKSVVMEGGEERPR LPGPLPPGEAGLPAPSTRPLLSSEVPQISPQEGLPLSQSALSIAKEKNISLQTAIAIEALTQLSSALPQP SHSTPQASCPLPEALSPPAPFRSPQSYLRAPSWPVVPPEEHSSFAPDSSAFPPATPRTEFPEAWGTDTPP ATPRSSWPMPRPSPDPMAELEQLLGSASDYIQSVFKRPEALPTKPKVKVEAPSSSPAPAPSPVLQREAPT PSSEPDTHQKAQTALQQHLHHKRSLFLEQVHDTSFPAPSEPSAPGWWPPPSSPVPRLPDRPPKEKKKKLP TPAGGPVGTEKAAPGIKPSVRKPIQIKKSRPREAQPLFPPVRQIVLEGLRSPASQEVQAHPPAPLPASQG SAVPLPPEPSLALFAPSPSRDSLLPPTQEMRSPSPMTALQPGSTGPLPPADDKLEELIRQFEAEFGDSFG LPGPPSVPIQDPENQQTCLPAPESPFATRSPKQIKIESSGAVTVLSTTCFHSEEGGQEATPTKAENPLTP TLSGFLESPLKYLDTPTKSLLDTPAKRAQAEFPTCDCVEQIVEKDEGPYYTHLGSGPTVASIRELMEERY GEKGKAIRIEKVIYTGKEGKSSRGCPIAKWVIRRHTLEEKLLCLVRHRAGHHCQNAVIVILILAWEGIPR SLGDTLYQELTDTLRKYGNPTSRRCGLNDDRTCACQGKDPNTCGASFSFGCSWSMYFNGCKYARSKTPRK FRLAGDNPKEEEVLRKSFQDLATEVAPLYKRLAPQAYQNQVTNEEIAIDCRLGLKEGRPFAGVTACMDFC AHAHKDQHNLYNGCTVVCTLTKEDNRCVGKIPEDEQLHVLPLYKMANTDEFGSEENQNAKVGSGAIQVLT AFPREVRRLPEPAKSCRQRQLEARKAAAEKKKIQKEKLSTPEKIKQEALELAGITSDPGLSLKGGLSQQG LKPSLKVEPQNHFSSFKYSGNAVVESYSVLGNCRPSDPYSMNSVYSYHSYYAQPSLTSVNGFHSKYALPS FSYYGFPSSNPVFPSQFLGPGAWGHSGSSGSFEKKPDLHALHNSLSPAYGGAEFAELPSQAVPTDAHHPT PHHQQPAYPGPKEYLLPKAPLLHSVSRDPSPFAQSSNCYNRSIKQEPVDPLTQAEPVPRDAGKMGKTPLS EVSQNGGPSHLWGQYSGGPSMSPKRTNGVGGSWGVFSSGESPAIVPDKLSSFGASCLAPSHFTDGQWGLF PGEGQQAASHSGGRLRGKPWSPCKFGNSTSALAGPSLTEKPWALGAGDFNSALKGSPGFQDKLWNPMKGE EGRIPAAGASQLDRAWQSFGLPLGSSEKLFGALKSEEKLWDPFSLEEGPAEEPPSKGAVKEEKGGGGAEE EEEELWSDSEHNFLDENIGGVAVAPAHGSILIECARRELHATTPLKKPNRCHPTRISLVFYQHKNLNQPN HGLALWEAKMKQLAERARARQEEAARLGLGQQEAKLYGKKRKWGGTVVAEPQQKEKKGVVPTRQALAVPT DSAVTVSSYAYTKVTGPYSRWI
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