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Report for CCDS92970.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92970.1 Public Homo sapiens 2 ARMC9 24 110 108 CCDS HistoryNCBI Gene:80210Re-query CCDS DB by CCDS ID:92970.1Re-query CCDS DB by GeneID:80210See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92970.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000682002.1 ENSP00000507152.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682002.1Link to Ensembl Protein Viewer:ENSP00000507152.1Re-query CCDS DB by Nucleotide ID:ENST00000682002Re-query CCDS DB by Protein ID:ENSP00000507152
Original member Current member EBI ENST00000683271.1 ENSP00000507513.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683271.1Link to Ensembl Protein Viewer:ENSP00000507513.1Re-query CCDS DB by Nucleotide ID:ENST00000683271Re-query CCDS DB by Protein ID:ENSP00000507513
Original member Current member NCBI NM_001352757.2 NP_001339686.2 Accepted alive Link to Nucleotide Sequence:NM_001352757.2Link to Protein Sequence:NP_001339686.2Re-query CCDS DB by Nucleotide ID:NM_001352757Re-query CCDS DB by Protein ID:NP_001339686Link to BLAST:NP_001339686.2
Original member Current member NCBI NM_001352758.2 NP_001339687.2 Accepted alive Link to Nucleotide Sequence:NM_001352758.2Link to Protein Sequence:NP_001339687.2Re-query CCDS DB by Nucleotide ID:NM_001352758Re-query CCDS DB by Protein ID:NP_001339687Link to BLAST:NP_001339687.2

Chromosomal Locations for CCDS 92970.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 231206239 231206289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231208127 231208252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231214831 231215001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231216638 231216793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231222728 231222820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231226774 231226798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231235224 231235381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231256586 231256620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231258991 231259102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231262306 231262398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231270982 231271072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231272955 231273078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231276636 231276775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231278382 231278458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231282059 231282133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231291353 231291443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231296198 231296253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231331793 231331897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231344975 231345094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1899 nt):
ATGGGGGACATTCTGGCTCATGAATCTGAATTACTTGGACTAGTGAAAGAGTATTTAGATTTTGCTGAAT
TTGAAGACACCTTGAAAACATTTTCAAAAGAATGCAAAATAAAAGGAAAACCATTGTGTAAAACAGTAGG
CGGATCTTTCAGAGACTCCAAATCATTGACAATTCAGAAGGATCTTGTCGCTGCATTTGACAACGGAGAC
CAGAAGGTGTTCTTCGATCTGTGGGAGGAGCACATTTCAAGTTCCATCCGAGATGGGGACTCCTTTGCCC
AGAAGCTGGAATTCTATCTCCACATCCATTTTGCCATCTATCTTTTGAAGTACTCTGTGGGGAGACCGGA
CAAAGAGGAGCTGGATGAAAAGATTTCCTACTTCAAAACCTACCTGGAGACCAAAGGGGCAGCCTTGAGC
CAGACCACAGAGTTTCTTCCTTTCTATGCCCTTCCTTTTGTTCCCAACCCTATGGTGCACCCCTCATTTA
AAGAACTCTTCCAGGATTCCTGGACTCCAGAGTTAAAGTTGAAGTTGATAAAGTTTCTAGCTTTAATATC
TAAAGCCAGCAACACGCCAAAGCTTTTAACAATATATAAGGAGAATGGACAAAGTAACAAAGAAATCTTG
CAGCAGCTCCACCAGCAGCTGGTTGAAGCTGAACGTAGGTCAGTGACATACCTCAAACGGTACAATAAGA
TCCAGGCCGACTACCACAATCTCATTGGAGTCACAGCAGAGCTGGTGGATTCTCTAGAGGCCACAGTCAG
CGGCAAGATGGCATCCACCATGTTACGAGCCTCCTTGGCACCCGTGAAATTGAAGGATGTCCCATTACTG
CCCTCCTTGGATTATGAGAAACTGAAGAAGGATTTGATTTTGGGGAGTGACCGCTTGAAAGCCTTCTTGT
TGCAGGCTCTGCGCTGGCGCTTGACCACATCCCATCCTGGAGAGCAGAGGGAGACCGTTCTGCAAGCCTA
CATCAGCAATGACCTCTTGGACTGTTATAGCCACAACCAGAGGAGTGTGCTTCAGTTGCTGCACTCCACG
AGCGACGTGGTGCGGCAGTACATGGCCAGGCTCATCAATGCTTTTGCGTCACTGGCAGAAGGTCGCCTCT
ACCTTGCCCAGAACACAAAGGTGCTGCAGATGCTGGAGGGAAGGCTGAAGGAGGAGGACAAGGATATCAT
CACCAGGGAGAATGTTCTTGGGGCCCTGCAGAAGTTCAGTCTCAGGCGCCCGCTGCAGACAGCGATGATT
CAAGACGGCCTCATCTTCTGGCTGGTTGATGTTCTGAAGGACCCTGACTGCCTGTCTGACTACACGCTGG
AGTACTCGGTGGCTTTGCTCATGAACCTCTGCCTCCGCAGCACAGGGAAGAACATGTGTGCCAAGGTGGC
AGGCCTCGTGCTCAAAGTCCTTTCGGATCTTCTTGGCCATGAAAACCATGAGATACAGCCGTATGTGAAT
GGAGCTCTGTACAGCATCCTTTCTGTTCCATCCATTCGTGAGGAAGCAAGAGCAATGGGAATGGAAGACA
TCCTACGCTGCTTCATCAAAGAAGGCAATGCTGAAATGATCCGCCAGATAGAATTCATCATCAAGCAGCT
AAATTCCGAAGAGCTACCAGATGGTGTTCTTGAATCTGATGATGATGAAGATGAAGATGATGAAGAGGAC
CATGACATCATGGAAGCCGATCTGGACAAAGACGAACTGATCCAGCCCCAGCTCGGAGAACTCTCAGGAG
AGAAGCTTCTGACCACGGAGTACCTGGGGATCATGACCAACACGGGGAAGACAAGGCGGAAGGGGCTGGC
TAATGTGCAGTGGAGCGGGGATGAGCCCCTGCAAAGGCCCGTCACCCCCGGCGGCCACAGAAACGGGTAC
CCAGTGTAA

Translation (632 aa):
MGDILAHESELLGLVKEYLDFAEFEDTLKTFSKECKIKGKPLCKTVGGSFRDSKSLTIQKDLVAAFDNGD
QKVFFDLWEEHISSSIRDGDSFAQKLEFYLHIHFAIYLLKYSVGRPDKEELDEKISYFKTYLETKGAALS
QTTEFLPFYALPFVPNPMVHPSFKELFQDSWTPELKLKLIKFLALISKASNTPKLLTIYKENGQSNKEIL
QQLHQQLVEAERRSVTYLKRYNKIQADYHNLIGVTAELVDSLEATVSGKMASTMLRASLAPVKLKDVPLL
PSLDYEKLKKDLILGSDRLKAFLLQALRWRLTTSHPGEQRETVLQAYISNDLLDCYSHNQRSVLQLLHST
SDVVRQYMARLINAFASLAEGRLYLAQNTKVLQMLEGRLKEEDKDIITRENVLGALQKFSLRRPLQTAMI
QDGLIFWLVDVLKDPDCLSDYTLEYSVALLMNLCLRSTGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVN
GALYSILSVPSIREEARAMGMEDILRCFIKEGNAEMIRQIEFIIKQLNSEELPDGVLESDDDEDEDDEED
HDIMEADLDKDELIQPQLGELSGEKLLTTEYLGIMTNTGKTRRKGLANVQWSGDEPLQRPVTPGGHRNGY
PV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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