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Report for CCDS9310.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9310.1 Public Homo sapiens 13 CPAP 24 110 108 CCDS HistoryNCBI Gene:55835Re-query CCDS DB by CCDS ID:9310.1Re-query CCDS DB by GeneID:55835See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9310.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381884.9 ENSP00000371308.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381884.9Link to Ensembl Protein Viewer:ENSP00000371308.4Re-query CCDS DB by Nucleotide ID:ENST00000381884Re-query CCDS DB by Protein ID:ENSP00000371308
Original member Current member NCBI NM_018451.5 NP_060921.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018451.5Link to Protein Sequence:NP_060921.3Re-query CCDS DB by Nucleotide ID:NM_018451Re-query CCDS DB by Protein ID:NP_060921Link to BLAST:NP_060921.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060921.3 1338 Q9HC77-1 1338 100% 0 0

Chromosomal Locations for CCDS 9310.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 24883177 24883369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24883963 24884083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24884161 24884245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24884323 24884463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24885276 24885386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24885606 24885670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24889316 24889400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24892643 24892867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24899419 24899584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24903926 24904058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24905346 24906960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24907091 24907193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24908018 24908126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24909790 24910086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24911946 24912069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24912582 24913025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4017 nt):
ATGTTCCTGATGCCAACCTCTTCAGAGTTAAACAGTGGGCAGAACTTCCTAACCCAGTGGATGACCAATC
CTTCTCGGGCTGGGGTCATATTAAATCGTGGATTTCCTATTTTGGAAGCAGACAAAGAGAAGCGAGCAGC
TGTGGACATTTCTACCAGCTTTCCTATTAAAGGCACACATTTTTCTGATAGCTTCAGCTTTATAAATGAA
GAAGATTCACTTCTTGAAGAACAGAAGTTGGAGTCAAACAACCCTTACAAACCACAGTCAGATAAATCTG
AAACCCATACAGCCTTTCCTTGCATTAAAAAGGGACCACAGGTAGCGGCATGTCACAGTGCTCCTGGACA
CCAGGAAGAAAACAAAAATGACTTCATCCCAGATCTTGCGAGTGAATTCAAAGAAGGGGCTTATAAAGAC
CCACTTTTTAAAAAACTTGAACAGCTGAAAGAAGTACAACAGAAGAAGCAGGAACAATTGAAGAGGCAAC
AGTTGGAGCAACTACAGAGACTCATGGAAGAACAAGAGAAGCTGCTCACCATGGTGTCTGGGCAGTGCAC
ACTTCCAGGTTTGAGTTTACTGCCTGATGATCAGAGCCAGAAGCACAGGTCTCCAGGAAATACCACCACT
GGAGAGAGAGCCACATGCTGCTTCCCATCATATGTCTACCCGGACCCAACCCAGGAAGAAACATACCCGT
CCAACATTTTATCCCATGAGCAAAGCAACTTCTGTAGAACTGCTCATGGAGATTTTGTCTTAACTTCAAA
ACGTGCGTCTCCTAATTTATTTTCTGAGGCACAGTATCAAGAAGCACCTGTGGAAAAAAATAATTTAAAA
GAAGAAAACCGTAACCATCCTACAGGAGAAAGTATCTTATGTTGGGAGAAAGTGACAGAACAGATTCAGG
AAGCAAATGATAAGAACTTACAAAAACATGATGATTCCTCAGAAGTGGCTAATATTGAAGAAAGGCCCAT
TAAAGCTGCTATTGGAGAAAGGAAACAGACCTTTGAAGATTACTTAGAAGAACAAATTCAGTTGGAAGAG
CAAGAACTGAAGCAAAAACAGCTGAAGGAAGCAGAAGGACCATTGCCAATCAAAGCAAAACCAAAACAAC
CATTTTTAAAACGAGGAGAAGGTTTAGCTAGATTTACTAATGCCAAATCTAAGTTTCAAAAAGGCAAAGA
AAGTAAACTAGTGACTAACCAGAGCACTTCCGAGGACCAGCCGCTGTTTAAAATGGATAGACAGCAACTC
CAGCGGAAAACCGCTCTTAAAAATAAAGAGCTGTGTGCAGACAACCCTATCCTTAAAAAGGACAGTAAAG
CTAGAACCAAGAGTGGTTCTGTCACCCTCAGTCAGAAGCCGAAAATGCTGAAGTGTAGTAACAGGAAAAG
TCTTTCTCCGTCAGGATTGAAAATACAGACGGGGAAGAAATGTGATGGGCAGTTTAGAGACCAGATCAAA
TTTGAAAACAAAGTCACATCTAATAATAAAGAAAATGTAACTGAGTGTCCAAAACCTTGCGATACTGGCT
GCACAGGGTGGAATAAGACACAAGGTAAAGACAGACTTCCTCTTTCAACAGGGCCGGCCAGCCGGCTGGC
TGCTAAGAGCCCCATAAGGGAGACCATGAAAGAGTCTGAATCTTCTCTTGACGTTTCTCTTCAGAAAAAG
TTAGAGACTTGGGAACGAGAAAAGGAAAAGGAAAATTTGGAATTAGATGAATTTTTGTTTTTAGAACAAG
CTGCTGATGAAATATCATTTTCTAGTAATTCCTCATTTGTACTGAAAATCTTAGAAAGGGATCAACAGAT
CTGCAAAGGTCACCGGATGTCTTCCACCCCTGTCAAAGCTGTGCCACAGAAGACAAATCCGGCAGATCCC
ATTAGTCATTGTAACCGCAGTGAGGATTTGGACCACACTGCACGTGAGAAGGAGAGTGAGTGTGAAGTCG
CACCCAAACAACTTCATTCATTGTCCTCAGCTGATGAATTGAGGGAACAGCCTTGTAAAATCAGGAAAGC
CGTCCAAAAGAGCACTTCTGAAAATCAGACTGAATGGAATGCACGTGACGATGAAGGTGTTCCAAATAGT
GACAGTAGCACTGACTCTGAGGAACAGCTTGATGTTACCATAAAACCATCGACTGAGGATAGAGAGAGGG
GCATCAGCAGCAGAGAGGATAGCCCACAAGTCTGTGATGATAAGGGGCCTTTTAAGGACACCAGGACCCA
AGAAGATAAAAGGAGAGATGTTGATCTGGATTTGTCTGATAAAGATTACAGTAGCGATGAGTCTATCATG
GAAAGCATAAAACATAAAGTGTCTGAGCCCTCGAGATCCTCATCCCTAAGTCTGAGTAAAATGGACTTTG
ATGATGAAAGAACTTGGACTGACCTTGAAGAGAATTTGTGTAACCATGATGTTGTTCTTGGGAATGAATC
CACTTATGGGACGCCGCAGACATGCTACCCTAATAATGAAATAGGTATCCTGGACAAAACAATAAAAAGG
AAGATTGCACCAGTCAAGAGGGGAGAAGACTTGAGCAAGTCCAGGAGGAGCAGAAGTCCTCCTACATCGG
AGCTGATGATGAAATTCTTTCCTTCTTTGAAACCAAAACCAAAGTCAGATTCACACTTGGGAAATGAACT
CAAGTTAAACATAAGTCAAGACCAACCACCTGGTGACAATGCTCGATCCCAGGTTTTGAGAGAGAAAATT
ATTGAATTGGAAACAGAAATAGAAAAGTTTAAAGCTGAGAACGCATCTTTAGCTAAACTTCGCATTGAAC
GAGAAAGTGCCTTGGAAAAACTCAGGAAAGAAATTGCAGACTTCGAACAACAGAAAGCAAAAGAATTAGC
TCGAATAGAAGAGTTTAAAAAGGAGGAGATGAGGAAGCTACAAAAGGAACGTAAAGTTTTTGAAAAGTAT
ACTACAGCTGCAAGAACTTTTCCAGATAAAAAGGAACGTGAAGAAATACAGACTTTAAAACAGCAAATAG
CAGATTTACGGGAAGATTTGAAAAGAAAGGAAACCAAATGGTCAAGTACACACAGCCGTCTCAGAAGCCA
GATACAAATGTTAGTCAGAGAGAACACAGACCTCCGGGAAGAAATAAAAGTGATGGAAAGATTCCGACTG
GATGCCTGGAAGAGAGCAGAAGCCATAGAGAGCAGCCTCGAGGTGGAGAAGAAGGACAAGCTTGCGAACA
CATCTGTTCGATTTCAAAACAGTCAGATTTCTTCAGGAACCCAGGTAGAAAAATACAAGAAAAATTATCT
TCCAATGCAAGGCAATCCACCTCGAAGATCCAAGTCTGCACCTCCTCGTGATTTAGGCAATTTGGATAAG
GGACAAGCTGCCTCTCCCAGGGAGCCACTTGAACCACTGAACTTCCCAGATCCTGAATATAAAGAGGAGG
AGGAAGACCAAGACATACAGGGAGAAATCAGTCATCCTGATGGAAAGGTGGAAAAGGTTTATAAGAATGG
GTGCCGTGTTATACTGTTTCCCAATGGAACTCGAAAGGAAGTGAGTGCAGATGGGAAGACCATCACTGTC
ACTTTCTTTAATGGTGACGTGAAGCAGGTCATGCCAGACCAAAGAGTGATCTACTACTATGCAGCTGCCC
AGACCACTCACACGACATACCCGGAGGGACTGGAAGTCTTACATTTCTCAAGTGGACAAATAGAAAAACA
TTACCCAGATGGAAGAAAAGAAATCACGTTTCCTGACCAGACTGTTAAAAACTTATTTCCTGATGGACAA
GAAGAAAGCATTTTCCCAGATGGTACAATTGTCAGAGTACAACGTGATGGCAACAAACTCATAGAGTTTA
ATAATGGCCAAAGAGAACTACATACTGCCCAGTTCAAGAGACGGGAATACCCAGATGGCACTGTTAAAAC
CGTATATGCAAACGGTCATCAAGAAACGAAGTACAGATCCGGTCGGATAAGAGTTAAGGACAAGGAGGGT
AATGTGCTAATGGACACGGAGCTGTGA

Translation (1338 aa):
MFLMPTSSELNSGQNFLTQWMTNPSRAGVILNRGFPILEADKEKRAAVDISTSFPIKGTHFSDSFSFINE
EDSLLEEQKLESNNPYKPQSDKSETHTAFPCIKKGPQVAACHSAPGHQEENKNDFIPDLASEFKEGAYKD
PLFKKLEQLKEVQQKKQEQLKRQQLEQLQRLMEEQEKLLTMVSGQCTLPGLSLLPDDQSQKHRSPGNTTT
GERATCCFPSYVYPDPTQEETYPSNILSHEQSNFCRTAHGDFVLTSKRASPNLFSEAQYQEAPVEKNNLK
EENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIEERPIKAAIGERKQTFEDYLEEQIQLEE
QELKQKQLKEAEGPLPIKAKPKQPFLKRGEGLARFTNAKSKFQKGKESKLVTNQSTSEDQPLFKMDRQQL
QRKTALKNKELCADNPILKKDSKARTKSGSVTLSQKPKMLKCSNRKSLSPSGLKIQTGKKCDGQFRDQIK
FENKVTSNNKENVTECPKPCDTGCTGWNKTQGKDRLPLSTGPASRLAAKSPIRETMKESESSLDVSLQKK
LETWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQQICKGHRMSSTPVKAVPQKTNPADP
ISHCNRSEDLDHTAREKESECEVAPKQLHSLSSADELREQPCKIRKAVQKSTSENQTEWNARDDEGVPNS
DSSTDSEEQLDVTIKPSTEDRERGISSREDSPQVCDDKGPFKDTRTQEDKRRDVDLDLSDKDYSSDESIM
ESIKHKVSEPSRSSSLSLSKMDFDDERTWTDLEENLCNHDVVLGNESTYGTPQTCYPNNEIGILDKTIKR
KIAPVKRGEDLSKSRRSRSPPTSELMMKFFPSLKPKPKSDSHLGNELKLNISQDQPPGDNARSQVLREKI
IELETEIEKFKAENASLAKLRIERESALEKLRKEIADFEQQKAKELARIEEFKKEEMRKLQKERKVFEKY
TTAARTFPDKKEREEIQTLKQQIADLREDLKRKETKWSSTHSRLRSQIQMLVRENTDLREEIKVMERFRL
DAWKRAEAIESSLEVEKKDKLANTSVRFQNSQISSGTQVEKYKKNYLPMQGNPPRRSKSAPPRDLGNLDK
GQAASPREPLEPLNFPDPEYKEEEEDQDIQGEISHPDGKVEKVYKNGCRVILFPNGTRKEVSADGKTITV
TFFNGDVKQVMPDQRVIYYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQ
EESIFPDGTIVRVQRDGNKLIEFNNGQRELHTAQFKRREYPDGTVKTVYANGHQETKYRSGRIRVKDKEG
NVLMDTEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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