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Report for CCDS93252.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93252.1 Public Homo sapiens 3 ABHD5 24 110 108 CCDS HistoryNCBI Gene:51099Re-query CCDS DB by CCDS ID:93252.1Re-query CCDS DB by GeneID:51099See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93252.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458276.7 ENSP00000390849.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000458276.7Link to Ensembl Protein Viewer:ENSP00000390849.3Re-query CCDS DB by Nucleotide ID:ENST00000458276Re-query CCDS DB by Protein ID:ENSP00000390849
Original member Current member NCBI NM_001365650.1 NP_001352579.1 Accepted alive Link to Nucleotide Sequence:NM_001365650.1Link to Protein Sequence:NP_001352579.1Re-query CCDS DB by Nucleotide ID:NM_001365650Re-query CCDS DB by Protein ID:NP_001352579Link to BLAST:NP_001352579.1

Chromosomal Locations for CCDS 93252.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 43690993 43691039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43699276 43699361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43702215 43702587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43711709 43711863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43714947 43715058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43718443 43718506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (837 nt):
ATGGCGGCGGAGGAGGAGGAGGTGGACTCTGCCGACACCGGAGAGAGGTCAGGATGGCTAACTGGTTGGC
TCCCCACATGGTGCCCTACGTCTATATCACACCTTAAAGAAGCTGAAGAGAAGATGTTAAAATGTGTGCC
TTGCACATACAAAAAAGAACCTGTTCGTATATCTAATGGAAATAAAATATGGACACTGAAGTTCTCTCAT
AATATTTCAAATAAGACTCCACTTGTCCTTCTCCATGGTTTTGGAGGAGGTCTTGGGCTCTGGGCACTGA
ATTTTGGAGATCTTTGCACCAACAGACCTGTCTATGCTTTTGACCTATTGGGTTTTGGACGAAGTAGTAG
ACCCAGGTTTGACAGTGATGCAGAAGAAGTGGAGAATCAGTTTGTGGAATCCATTGAAGAGTGGAGATGT
GCCCTAGGATTGGACAAAATGATCTTGCTTGGGCACAACCTAGGTGGATTCTTGGCTGCTGCTTACTCGC
TGAAGTACCCATCAAGGGTTAATCATCTCATTTTAGTGGAGCCTTGGGGTTTCCCTGAACGACCAGACCT
TGCTGATCAAGACAGACCAATTCCAGTTTGGATCAGAGCCTTGGGAGCAGCATTGACTCCCTTTAACCCT
TTAGCTGGCCTAAGGATTGCAGGACCCTTTGGTTTAAGTCTAGTGCAGCGTTTAAGGCCTGATTTCAAAC
GAAAGTATTCTTCAATGTTCGAAGACGATACTGTGACAGAATACATCTACCACTGTAATGTGCAGACTCC
AAGGCTATTCTTGGGGCAGGACATTATGTATATGCAGATCAACCAGAAGAATTCAACCAGAAAGTAA

Translation (278 aa):
MAAEEEEVDSADTGERSGWLTGWLPTWCPTSISHLKEAEEKMLKCVPCTYKKEPVRISNGNKIWTLKFSH
NISNKTPLVLLHGFGGGLGLWALNFGDLCTNRPVYAFDLLGFGRSSRPRFDSDAEEVENQFVESIEEWRC
ALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWGFPERPDLADQDRPIPVWIRALGAALTPFNP
LAGLRIAGPFGLSLVQRLRPDFKRKYSSMFEDDTVTEYIYHCNVQTPRLFLGQDIMYMQINQKNSTRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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