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Report for CCDS93253.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93253.1 Public Homo sapiens 3 ABHD5 24 110 108 CCDS HistoryNCBI Gene:51099Re-query CCDS DB by CCDS ID:93253.1Re-query CCDS DB by GeneID:51099See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93253.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454293.2 ENSP00000412014.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454293.2Link to Ensembl Protein Viewer:ENSP00000412014.2Re-query CCDS DB by Nucleotide ID:ENST00000454293Re-query CCDS DB by Protein ID:ENSP00000412014
Original member Current member EBI ENST00000642351.1 ENSP00000494478.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642351.1Link to Ensembl Protein Viewer:ENSP00000494478.1Re-query CCDS DB by Nucleotide ID:ENST00000642351Re-query CCDS DB by Protein ID:ENSP00000494478
Original member Current member NCBI NM_001365649.1 NP_001352578.1 Accepted alive Link to Nucleotide Sequence:NM_001365649.1Link to Protein Sequence:NP_001352578.1Re-query CCDS DB by Nucleotide ID:NM_001365649Re-query CCDS DB by Protein ID:NP_001352578Link to BLAST:NP_001352578.1

Chromosomal Locations for CCDS 93253.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 43699352 43699361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43702215 43702587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43711709 43711863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43714947 43715058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43717671 43717857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43718443 43718532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGTTAAAATGTGTGCCTTGCACATACAAAAAAGAACCTGTTCGTATATCTAATGGAAATAAAATATGGA
CACTGAAGTTCTCTCATAATATTTCAAATAAGACTCCACTTGTCCTTCTCCATGGTTTTGGAGGAGGTCT
TGGGCTCTGGGCACTGAATTTTGGAGATCTTTGCACCAACAGACCTGTCTATGCTTTTGACCTATTGGGT
TTTGGACGAAGTAGTAGACCCAGGTTTGACAGTGATGCAGAAGAAGTGGAGAATCAGTTTGTGGAATCCA
TTGAAGAGTGGAGATGTGCCCTAGGATTGGACAAAATGATCTTGCTTGGGCACAACCTAGGTGGATTCTT
GGCTGCTGCTTACTCGCTGAAGTACCCATCAAGGGTTAATCATCTCATTTTAGTGGAGCCTTGGGGTTTC
CCTGAACGACCAGACCTTGCTGATCAAGACAGACCAATTCCAGTTTGGATCAGAGCCTTGGGAGCAGCAT
TGACTCCCTTTAACCCTTTAGCTGGCCTAAGGATTGCAGGACCCTTTGGTTTAAGTCTAGTGCAGCGTTT
AAGGCCTGATTTCAAACGAAAGTATTCTTCAATGTTCGAAGACGATACTGTGACAGAATACATCTACCAC
TGTAATGTGCAGACTCCAAGTGGTGAGACAGCTTTCAAGAATATGACTATTCCTTATGGATGGGCAAAAA
GGCCAATGCTCCAGCGAATTGGTAAAATGCACCCTGACATTCCAGTTTCAGTGATCTTTGGCGCCCGATC
CTGCATAGATGGCAATTCTGGCACCAGCATCCAGTCCTTACGACCACATTCATATGTGAAGACAATAGCT
ATTCTTGGGGCAGGACATTATGTATATGCAGATCAACCAGAAGAATTCAACCAGAAAGTAAAGGAGATCT
GCGACACTGTGGACTGA

Translation (308 aa):
MLKCVPCTYKKEPVRISNGNKIWTLKFSHNISNKTPLVLLHGFGGGLGLWALNFGDLCTNRPVYAFDLLG
FGRSSRPRFDSDAEEVENQFVESIEEWRCALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWGF
PERPDLADQDRPIPVWIRALGAALTPFNPLAGLRIAGPFGLSLVQRLRPDFKRKYSSMFEDDTVTEYIYH
CNVQTPSGETAFKNMTIPYGWAKRPMLQRIGKMHPDIPVSVIFGARSCIDGNSGTSIQSLRPHSYVKTIA
ILGAGHYVYADQPEEFNQKVKEICDTVD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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