CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS93484.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
93484.1 |
Public |
Homo sapiens |
4 |
LCORL |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:254251](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:93484.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:254251](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 93484.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000675143.1 |
ENSP00000502692.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000675143.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000502692.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000675143](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000502692](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001365660.1 |
NP_001352589.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001365660.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001352589.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001365660](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001352589](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001352589.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 93484.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (984 nt): ATGGACAAGGGAAGAGAGAGAATGGCCGCTGCCGCCGCCGCTGCTGCCGCCGCCGCCGCCGCCGCTCAGT GCCGGAGCCCTCGGTGCGCGGCGGAGAGAAGAGGATTCCGGCGGGAACTCGACTCTTGGCGCCACCGCCT CATGCACTGTGTAGGTTTTGAGAGTATTTTAGAAGGGCTTTATGGACCACGGCTACGAAGAGACCTCAGT TTATTTGAAGACTGTGAACCAGAAGAGCTGACTGACTGGTCTATGGATGAAAAATGTTCATTTTGTAACC TACAGAGAGAAGCAGTCAGTGATTGTATACCATCTCTTGATTCTTCACAGTCAACACCAACAGAGGAGCT ATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCACTCTTT CGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAACATTCCCCTAGTTGCTCAGGAATTAATGAAAAAGA TGATACGTCAATTTGCGATTGAGTACATTTCAAAAAGTGGTAAAACTCAAGAGAATAGAAATGGTTCAAT TGGACCAAGTATAGTATGTAAAAGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAGGAAGAGCAGGAA GGCCCCTTAGACCTCACTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC TCTCTACAAAGAAAACCAGCATAAAATCTGAAGAGTCATCCATATGTGATCCTTCTTCTGAAAATTCAGT GGCTGGCCTCCAGACCTGCTTTCTCTATCTGAGCATGCTACAAGTGAAAACTGATGAGAAACTGAATGTG TCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGAATGGA ATCTGAATTTGACAACAGCATCTCTAACGAGCTGTACAGTTCATAACCAAAATCTCAAAAGCGAAGAGAA ATAG
Translation (327 aa): MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGLYGPRLRRDLS LFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQGQSNTDKIECQAENYLNALF RKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQENRNGSIGPSIVCKSIQMNQAENSLQEEQE GPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSICDPSSENSVAGLQTCFLYLSMLQVKTDEKLNV SDENTASCPLSPIKMCLNRPIEWNLNLTTASLTSCTVHNQNLKSEEK
|