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Report for CCDS93799.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93799.1 Public Homo sapiens 5 TCERG1 24 110 108 CCDS HistoryNCBI Gene:10915Re-query CCDS DB by CCDS ID:93799.1Re-query CCDS DB by GeneID:10915See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93799.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000679501.2 ENSP00000505217.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000679501.2Link to Ensembl Protein Viewer:ENSP00000505217.1Re-query CCDS DB by Nucleotide ID:ENST00000679501Re-query CCDS DB by Protein ID:ENSP00000505217
Original member Current member NCBI NM_001382548.1 NP_001369477.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001382548.1Link to Protein Sequence:NP_001369477.1Re-query CCDS DB by Nucleotide ID:NM_001382548Re-query CCDS DB by Protein ID:NP_001369477Link to BLAST:NP_001369477.1

Chromosomal Locations for CCDS 93799.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 146447350 146447408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146455056 146455281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146457183 146457335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146458884 146459337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146463551 146463793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146468341 146468403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146469544 146469744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146470636 146470748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146471488 146471576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146478493 146478653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146479855 146479911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146480028 146480094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146481150 146481200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146482592 146482727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146483540 146483629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146492920 146493038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146498536 146498686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146503375 146503539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146503824 146504006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146507028 146507207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146507873 146507956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146509145 146509245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146510441 146510642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3348 nt):
ATGGCGGAGCGTGGCGGGGACGGGGGCGAGAGTGAACGATTCAACCCGGGGGAGCTCAGGATGGCCCAAC
AGCAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGAT
GCGACCTCCTCCACCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGACGTCCT
CCTTTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCACCTATGGGCCCTCCACACC
TCCAGAGACCACCTTTCATGCCTCCTCCCATGAGTTCCATGCCTCCTCCTCCGGGTATGATGTTTCCACC
AGGAATGCCTCCTGTGACTGCTCCTGGTACTCCAGCACTACCTCCTACGGAGGAGATATGGGTTGAAAAT
AAAACTCCAGATGGGAAGGTTTATTATTATAATGCTCGGACACGTGAATCTGCATGGACCAAGCCAGATG
GAGTTAAGGTTATTCAGCAATCAGAACTGACACCTATGCTTGCAGCCCAGGCACAGGTTCAGGCTCAGGC
CCAGGCGCAGGCTCAGGCCCAGGCGCAGGCTCAGGCCCAGGCACAAGCTCAGGCCCAGGCTCAGGCTCAG
GCCCAGGCCCAGGCCCAGGCCCAGGCCCAGGCCCAAGCCCAAGCCCAGGCCCAGGCTCAGGCTCAGGCAC
AAGCTCAGGCCCAGGCCCAGGCTCAGGTCCAGGCCCAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGG
AGCTTCCACCCCTACGACCAGTAGCCCAGCACCTGCAGTATCCACTTCAACATCATCATCCACCCCTTCC
TCTACCACTTCTACCACAACAACTGCTACTTCAGTTGCGCAGACAGTATCAACACCCACAACACAAGATC
AGACCCCAAGTTCTGCTGTTTCAGTTGCCACGCCTACAGTTAGTGTTTCAACTCCTGCTCCTACAGCCAC
ACCTGTGCAAACCGTTCCCCAGCCGCACCCTCAGACGTTACCTCCTGCTGTTCCTCATTCAGTACCTCAG
CCAACAACAGCAATACCTGCTTTTCCACCAGTAATGGTACCTCCGTTTCGTGTTCCCCTTCCTGGCATGC
CAATTCCACTTCCAGGTGTAGCAATGATGCAAATAGTCAGCTGCCCGTATGTAAAGACAGTCGCTACCAC
CAAGACCGGTGTATTGCCAGGAATGGCCCCTCCTATCGTACCCATGATACATCCCCAGGTTGCTATTGCA
GCTTCACCTGCTACCTTAGCTGGAGCAACAGCAGTTTCTGAATGGACTGAATATAAAACAGCAGATGGGA
AGACATATTATTATAATAATAGAACATTAGAATCAACCTGGGAAAAACCCCAAGAACTAAAGGAAAAAGA
AAAGTTAGAAGAGAAGATTAAAGAGCCAATTAAAGAACCCTCTGAAGAGCCTCTGCCAATGGAGACGGAG
GAGGAGGATCCTAAAGAAGAGCCTATAAAGGAGATAAAGGAGGAGCCCAAAGAAGAGGAGATGACTGAAG
AAGAAAAGGCTGCCCAGAAGGCAAAGCCAGTTGCTACTGCTCCTATTCCTGGTACTCCATGGTGTGTCGT
TTGGACTGGTGATGAGCGGGTCTTCTTTTATAATCCCACCACTCGTCTTTCTATGTGGGACCGACCTGAT
GATCTGATTGGCAGGGCAGATGTTGACAAAATTATTCAGGAGCCCCCTCATAAAAAAGGAATGGAGGAAT
TGAAGAAACTAAGGCACCCAACTCCGACAATGCTGTCGATCCAAAAGTGGCAATTCTCTATGAGTGCAAT
TAAAGAGGAACAAGAATTAATGGAAGAAATTAATGAAGATGAGCCTGTTAAAGCAAAAAAACGGAAGAGA
ATGTCAAAGAAGTCCTTTATGTGGATTGCCCGAGCTTCTCTATTTAGGAGAGACGATAATAAAGACATTG
ACTCAGAGAAAGAAGCTGCCATGGAAGCTGAAATTAAAGCTGCCCGAGAAAGGGCCATTGTCCCTCTGGA
GGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAGAGAGAGGGGTGTCTGCTTTTTCAACGTGGGAGAAG
GAGTTGCACAAGATAGTTTTTGATCCCCGGTACTTACTTCTCAATCCTAAAGAGAGAAAACAGGTGTTTG
ATCAGTATGTAAAGACCAGGGCAGAGGAAGAACGCAGGGAAAAGAAAAATAAAATAATGCAAGCCAAGGA
AGATTTCAAAAAAATGATGGAAGAAGCAAAATTTAATCCAAGAGCAACTTTTAGTGAATTTGCAGCCAAG
CATGCTAAAGATTCAAGATTCAAAGCAATTGAAAAGATGAAAGACCGAGAAGCCTTGTTTAATGAGTTTG
TGGCCGCTGCTAGGAAGAAAGAGAAAGAAGATTCGAAGACCAGAGGTGAGAAGATTAAATCGGATTTCTT
TGAACTATTATCTAATCATCACTTGGACAGTCAGTCTCGATGGAGCAAAGTAAAAGACAAAGTAGAAAGT
GATCCACGTTACAAAGCAGTAGATAGTTCATCAATGAGAGAAGACCTTTTCAAACAGTACATTGAAAAAA
TAGCCAAGAATTTAGACTCAGAAAAAGAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGCAAGCCTTCG
AGAACGAGAAAGGGAGGTTCAAAAGGCCCGTTCAGAACAAACAAAAGAAATAGATCGAGAGAGAGAGCAG
CACAAACGAGAAGAAGCTATCCAGAATTTCAAAGCTCTTCTGTCTGACATGGTACGTTCTTCAGATGTGT
CATGGTCTGATACTCGTAGGACCCTCCGAAAAGATCACCGCTGGGAATCTGGATCCTTATTGGAAAGAGA
GGAGAAAGAGAAGCTTTTTAATGAACACATTGAAGCACTTACCAAAAAAAAGAGAGAGCACTTTAGGCAA
CTTCTGGATGAAACTTCTGCAATTACCTTAACATCCACGTGGAAAGAAGTAAAAAAAATCATTAAGGAAG
ATCCTCGATGTATTAAGTTCTCCTCCAGTGACAGGAAAAAACAAAGAGAATTTGAAGAATATATCAGAGA
CAAATATATCACAGCCAAAGCTGACTTCAGGACGCTTTTGAAAGAGACCAAATTTATAACATATAGATCC
AAAAAATTAATCCAAGAATCAGATCAGCACCTGAAAGATGTAGAAAAAATTTTACAGAATGACAAACGGT
ATCTAGTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATTGTGGCATATGTTGATGACCTGGATCG
CCGGGGTCCACCCCCACCTCCCACAGCATCGGAGCCCACGAGACGATCAACAAAATAA

Translation (1115 aa):
MAERGGDGGESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRP
PFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAPGTPALPPTEEIWVEN
KTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQ
AQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPS
STTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQ
PTTAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIA
ASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEPLPMETE
EEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATAPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPD
DLIGRADVDKIIQEPPHKKGMEELKKLRHPTPTMLSIQKWQFSMSAIKEEQELMEEINEDEPVKAKKRKR
MSKKSFMWIARASLFRRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEK
ELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAK
HAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVES
DPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQ
HKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQ
LLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRS
KKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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