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Report for CCDS93833.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93833.1 Public Homo sapiens 5 FAM153A 24 110 108 CCDS HistoryNCBI Gene:285596Re-query CCDS DB by CCDS ID:93833.1Re-query CCDS DB by GeneID:285596See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 93833.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614127.5 ENSP00000481950.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614127.5Link to Ensembl Protein Viewer:ENSP00000481950.1Re-query CCDS DB by Nucleotide ID:ENST00000614127Re-query CCDS DB by Protein ID:ENSP00000481950
Original member Current member NCBI NM_001394339.1 NP_001381268.1 Accepted alive Link to Nucleotide Sequence:NM_001394339.1Link to Protein Sequence:NP_001381268.1Re-query CCDS DB by Nucleotide ID:NM_001394339Re-query CCDS DB by Protein ID:NP_001381268Link to BLAST:NP_001381268.1

Chromosomal Locations for CCDS 93833.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 177724113 177724206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177724295 177724362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177724784 177724821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177729023 177729053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177729485 177729555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177731569 177731599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177732030 177732100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177734380 177734404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177734863 177734933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177736579 177736609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177737042 177737112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177739113 177739137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177739600 177739670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177740777 177740801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177741256 177741332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177744394 177744418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177744888 177744967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177747769 177747793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177748641 177748699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177750909 177751052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177753176 177753206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1164 nt):
ATGGGATGTGTTTATAGTTGTTGCCTTGAAGTGTGTTGTGGCGAGGATGAAATAGTGTATCCTAGGATGC
CAGGGGAATCCACCGTCTGCCACCGCGAGCGTGAGAAGCCAATCACCTATCACTGGTATCACTGGCATCC
CGGCCATATATACCCTAGAATTGCATCAATGGAAGATTACGATGAGGACCTGGTGCAGGAAGCTTCATCT
GAAGATGTCCTGGGCGTTCATATGGTGGACAAAGACACAGAGAGAGACATTGAGATGAAACGGCAACTAC
GGCGACTACGGGAGCTCCACCTATACAGCACATGGAAGAAGTACCAAGAGGCGATGAAGACATCCTTGGG
AGTTCCACAATGTGAGCGTGACGAAGGCTCCTTGGGCAAGCCATTGTGTCCACCCGAGATACTCTCGGAG
ACGTTGCCAGGCTCTGTGAAGAAAAGGGTATGCTTTCCATCAGAAGATCATCTAGAGGAGTTTATAGCAG
AACATCTCCCTGAAGCATCCAATCAGAGTCTCCTCACTGTTGCCCATGCAGACGCAGGCACCCAAACCAA
CGGTGACCTGGAAGACCTGGAGGAGCATGGGCCAGGGCAGACAGTCTCTGAGGAAGCCACAGAAGTTCAC
ACGATGGAGGGGGACCCAGACACACTGGCCGAATTTCTGATCAGGGATGTACTTCAGGAGCTGTCCAGTT
ACAACGGTGAGGAGGAGGACCCAGAGGAGGTGAAGACATCCTTGGGAGTTCCACAACGTGGTGACCTGGA
AGACCTGGAGGAGCATGTGCCAGGGCAGACAGTCTCTGAGGAAGCCACAGGGGTTCACATGATGCAGGTG
GACCCAGCCACGCTGGCAAAGAGTGACCTGGAAGACCTGGAGGAGCATGTGCCAGAGCAGACAGTCTCTG
AGGAAGCCACAGGGGTTCACATGATGCAGGTGGACCCAGCCACACTGGCAAAGCAATTGGAAGACTCCAC
CATTACAGGCAGCCACCAGCAGATGTCAGCAAGTCCTTCCTCTGCACCTGCAGAAGAAGCAACAGAAAAG
ACCAAAGTGGAAGAGGAAGTGAAAACCAGAAAGCCCAAGAAGAAAACCAGGAAGCCCAGCAAGAAAAGCC
GGTGGAATGTCCTGAAATGTTGGGACATTTTTAATATATTTTAG

Translation (387 aa):
MGCVYSCCLEVCCGEDEIVYPRMPGESTVCHREREKPITYHWYHWHPGHIYPRIASMEDYDEDLVQEASS
EDVLGVHMVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEILSE
TLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHADAGTQTNGDLEDLEEHGPGQTVSEEATEVH
TMEGDPDTLAEFLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQV
DPATLAKSDLEDLEEHVPEQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEK
TKVEEEVKTRKPKKKTRKPSKKSRWNVLKCWDIFNIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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