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Report for CCDS9391.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
9391.1 |
Public |
Homo sapiens |
13 |
LACC1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:144811](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:9391.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:144811](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 13 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 9391.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000325686.7 |
ENSP00000317619.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000325686.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000317619.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000325686](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000317619](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000441843.5 |
ENSP00000391747.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000441843.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000391747.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000441843](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000391747](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001128303.2 |
NP_001121775.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001128303.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001121775.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001128303](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001121775](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001121775.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001350638.2 |
NP_001337567.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001350638.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001337567.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001350638](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001337567](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001337567.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001350639.2 |
NP_001337568.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001350639.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001337568.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001350639](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001337568](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001337568.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001350640.2 |
NP_001337569.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001350640.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001337569.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001350640](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001337569](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001337569.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001350641.2 |
NP_001337570.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001350641.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001337570.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001350641](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001337570](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001337570.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001350642.2 |
NP_001337571.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001350642.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001337571.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001350642](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001337571](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001337571.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_153218.4 |
NP_694950.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_153218.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_694950.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_153218](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_694950](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_694950.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 9391.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1293 nt): ATGGCAGAAGCTGTTTTGATTGATCTTTTTGGTTTGAAATTGAACTCTCAAAAAAACTGCCATCAGACAT TACTGAAGACTTTGAATGCTGTCCAATACCACCATGCTGCCAAGGCCAAGTTTCTCTGTATAATGTGTTG CAGTAACATCAGCTATGAAAGGGATGGAGAACAAGATAATTGTGAAATAGAAACAAGCAATGGATTATCA GCTCTCTTGGAAGAATTTGAGATTGTTAGCTGTCCCAGCATGGCTGCCACTTTGTATACCATTAAACAGA AAATTGATGAAAAAAATCTGAGCAGCATTAAGGTAATTGTACCCAGGCACAGGAAGACATTAATGAAAGC TTTTATTGATCAACTCTTCACTGATGTTTACAATTTTGAATTTGAAGATTTGCAAGTGACTTTTAGGGGA GGGCTTTTTAAACAGTCCATTGAAATAAACGTAATCACAGCTCAAGAACTAAGAGGAATTCAGAATGAAA TAGAAACATTTTTGAGAAGTCTGCCAGCACTGAGAGGAAAATTAACTATTATCACTTCTTCTTTGATCCC AGATATTTTCATACATGGATTTACTACAAGAACAGGTGGGATATCTTATATACCAACTCTTAGCTCATTC AATCTCTTCAGTAGTTCCAAACGGAGAGATCCCAAGGTAGTGGTTCAAGAAAATCTGCGTAGGTTGGCGA ATGCTGCAGGATTTAATGTGGAGAAATTTTACCGAATAAAGACTCATCATTCCAATGACATCTGGATTAT GGGAAGAAAGGAGCCTGACTCTTATGATGGAATAACCACAAATCAGAGAGGAGTCACAATAGCAGCTCTT GGTGCAGACTGTATACCGATAGTTTTTGCAGATCCAGTCAAAAAAGCATGTGGGGTTGCTCACGCTGGTT GGAAAGGTACTTTGTTGGGTGTTGCTATGGCTACAGTGAATGCTATGATAGCAGAATATGGCTGCAGTTT GGAAGACATTGTTGTTGTACTTGGACCTTCAGTAGGACCTTGCTGTTTTACTCTTCCAAGGGAATCAGCA GAGGCATTTCATAATCTTCATCCTGCATGTGTACAACTATTTGATTCACCAAATCCCTGTATCGACATCC GTAAAGCCACAAGGATTCTTCTAGAACAGGGAGGAATTCTTCCACAGAATATTCAGGACCAGAACCAAGA TCTCAACCTCTGTACATCTTGCCATCCTGACAAGTTTTTCTCCCATGTCCGAGATGGCCTTAATTTTGGT ACACAGATTGGCTTCATATCAATTAAAGAATGA
Translation (430 aa): MAEAVLIDLFGLKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIMCCSNISYERDGEQDNCEIETSNGLS ALLEEFEIVSCPSMAATLYTIKQKIDEKNLSSIKVIVPRHRKTLMKAFIDQLFTDVYNFEFEDLQVTFRG GLFKQSIEINVITAQELRGIQNEIETFLRSLPALRGKLTIITSSLIPDIFIHGFTTRTGGISYIPTLSSF NLFSSSKRRDPKVVVQENLRRLANAAGFNVEKFYRIKTHHSNDIWIMGRKEPDSYDGITTNQRGVTIAAL GADCIPIVFADPVKKACGVAHAGWKGTLLGVAMATVNAMIAEYGCSLEDIVVVLGPSVGPCCFTLPRESA EAFHNLHPACVQLFDSPNPCIDIRKATRILLEQGGILPQNIQDQNQDLNLCTSCHPDKFFSHVRDGLNFG TQIGFISIKE
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