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Report for CCDS94098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94098.1 Public Homo sapiens 7 TNS3 24 110 108 CCDS HistoryNCBI Gene:64759Re-query CCDS DB by CCDS ID:94098.1Re-query CCDS DB by GeneID:64759See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94098.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000705350.1 ENSP00000516118.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000705350.1Link to Ensembl Protein Viewer:ENSP00000516118.1Re-query CCDS DB by Nucleotide ID:ENST00000705350Re-query CCDS DB by Protein ID:ENSP00000516118
Current member NCBI NM_001410877.1 NP_001397806.1 Accepted alive Link to Nucleotide Sequence:NM_001410877.1Link to Protein Sequence:NP_001397806.1Re-query CCDS DB by Nucleotide ID:NM_001410877Re-query CCDS DB by Protein ID:NP_001397806Link to BLAST:NP_001397806.1

Chromosomal Locations for CCDS 94098.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 47278076 47278220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47280164 47280190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47280286 47280354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47283697 47283865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47291955 47292032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47292828 47292905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47293733 47293828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47297082 47297213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47302186 47302272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47302950 47303584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47304832 47305003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47344755 47344838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47344924 47345038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47346187 47346356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47368365 47369621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47396800 47396904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47400393 47400458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47400785 47400914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47411727 47411802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47413937 47413997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47415094 47415206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47424101 47424184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47428312 47428376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47435282 47435404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47437263 47437313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47439487 47439658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47442003 47442055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47481103 47481141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47506907 47506944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47529036 47529147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47537030 47537107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4680 nt):
ATGAGGCTGCGCGCCCTGACCCCTGGGCCACCGGGAGGGTTCGCGCGCGGAACCCGGTCGCGCCGGCGCC
GGCGCCAGCCGGAAGAATTAACCTCGAGTCTGCACGCTTTTAAGAACAAGGCCTTTAAAAAATCCAAAGT
GTGTGGAGTTTGCAAACAAATTATTGACGGTCAAGGTATTTCATGCCGAGCCTGCAAGTATTCCTGCCAC
AAGAAATGTGAAGCCAAGGTGGTGATTCCCTGCGGTGTGCAAGTCCGACTGGAACAGGCTCCAGGGAGTT
CCACGCTGTCCAGTTCTCTCTGCCGTGATAAACCTCTGCGGCCCGTCATCCTGAGTCCCACCATGGAGGA
GGGCCATGGGCTGGACCTCACTTACATCACGGAGCGCATCATCGCTGTGTCCTTCCCTGCCGGCTGCTCT
GAGGAGTCCTACCTGCACAACCTACAGGAGGTCACGCGCATGCTCAAGTCCAAGCACGGGGACAACTACC
TGGTATTAAACCTTTCAGAAAAGAGATATGACCTTACGAAGCTTAACCCAAAGATCATGGATGTGGGCTG
GCCAGAGCTCCACGCACCGCCCCTGGATAAGATGTGTACCATATGCAAGGCGCAGGAGTCCTGGCTGAAC
AGCAACCTCCAGCATGTGGTCGTCATTCACTGCAGGGGCGGGAAAGGACGCATAGGAGTGGTCATATCAT
CCTACATGCATTTCACCAACGTCTCAGCCAGCGCCGACCAGGCCCTTGACAGGTTTGCAATGAAGAAGTT
TTATGATGACAAAGTTTCAGCTTTAATGCAGCCTTCCCAAAAACGGTATGTTCAGTTCCTCAGTGGGCTC
CTGTCCGGATCGGTGAAAATGAATGCCTCTCCCCTGTTCCTGCATTTTGTCATCCTCCACGGCACCCCCA
ACTTCGACACAGGTGGAGTGTGCCGGCCCTTTCTGAAGCTCTACCAAGCCATGCAGCCTGTGTACACCTC
CGGGATCTACAACGTTGGCCCAGAAAACCCCAGCAGGATCTGCATCGTCATCGAGCCGGCCCAGCTTCTG
AAGGGAGATGTCATGGTGAAATGCTACCACAAGAAATACCGCTCGGCCACCCGTGACGTCATTTTCCGCC
TGCAGTTTCACACTGGGGCTGTGCAGGGCTACGGGCTGGTGTTTGGGAAGGAGGATCTGGACAATGCCAG
CAAAGATGACCGTTTTCCTGACTATGGGAAGGTTGAATTAGTCTTCTCTGCCACGCCTGAGAAGATTCAA
GGGTCCGAACACTTGTACAACGACCACGGTGTGATTGTGGACTACAACACAACAGACCCACTGATACGCT
GGGACTCGTACGAGAACCTCAGTGCAGATGGAGAAGTGCTACACACGCAGGGCCCTGTCGATGGCAGCCT
TTACGCGAAGGTGAGGAAGAAAAGCTCCTCGGATCCTGGCATCCCAGGTGGCCCCCAGGCAATCCCGGCC
ACCAACAGCCCAGACCACAGTGACCACACCTTGTCTGTCAGCAGTGACTCCGGCCACTCTACAGCCTCTG
CCAGGACGGATAAGACGGAAGAGCGCCTGGCCCCAGGAACCAGGAGGGGCCTGAGTGCCCAGGAGAAGGC
AGAGTTGGACCAGCTGCTCAGTGGCTTTGGCCTGGAAGATCCTGGAAGCTCCCTCAAGGAAATGACTGAT
GCTCGAAGCAAGTACAGTGGGACCCGCCACGTGGTGCCAGCCCAGGTTCACGTGAATGGAGACGCTGCTC
TGAAGGATCGGGAGACAGACATTCTGGATGACGAGATGCCCCACCACGACCTGCACAGTGTGGACAGCCT
TGGGACCCTGTCCTCCTCGGAAGGGCCTCAGTCGGCCCACCTGGGTCCCTTCACCTGCCACAAGAGCAGC
CAGAACTCACTCCTATCTGACGGTTTTGGCAGCAACGTTGGTGAAGATCCGCAGGGCACCCTCGTTCCGG
ACCTGGGCCTTGGCATGGACGGCCCCTATGAGCGGGAGCGGACTTTTGGGAGTCGAGAGCCCAAGCAGCC
CCAGCCCCTGCTGAGAAAGCCCTCAGTGTCCGCCCAGATGCAGGCCTATGGGCAGAGCAGCTACTCCACA
CAGACCTGGGTGCGCCAGCAGCAGATGGTTGTAGCTCACCAGTATAGCTTCGCCCCAGATGGGGAGGCCC
GGCTGGTGAGCCGCTGCCCTGCAGACAATCCTGGCCTCGTCCAGGCCCAGCCCAGAGTGCCACTCACCCC
CACCCGAGGGACCAGCAGTAGGGTGGCTGTCCAGAGGGGTGTAGGCAGTGGGCCACATCCCCCTGACACA
CAGCAGCCCTCTCCCAGCAAAGCGTTCAAACCCAGGTTTCCAGGAGACCAGGTTGTGAATGGAGCCGGCC
CAGAGCTGAGCACAGGCCCCTCCCCAGGCTCGCCCACCCTGGACATCGACCAGTCCATCGAGCAGCTCAA
CAGGCTGATCCTGGAGCTGGATCCCACCTTCGAGCCCATCCCTACCCACATGAACGCCCTCGGTAGCCAG
GCCAATGGCTCTGTGTCTCCAGACAGCGTGGGAGGTGGGCTCCGGGCAAGCAGCAGGCTGCCTGACACAG
GAGAGGGCCCCAGCAGGGCCACCGGGCGGCAAGGCTCCTCTGCTGAACAGCCCCTGGGCGGGAGACTCAG
GAAGCTGAGCCTGGGGCAGTACGACAACGATGCTGGGGGGCAGCTGCCCTTCTCCAAATGTGCATGGGGA
AAGGCTGGTGTGGACTATGCCCCAAACCTGCCGCCATTCCCCTCACCAGCGGACGTCAAAGAGACGATGA
CCCCTGGCTATCCCCAGGACCTCGATATTATCGATGGCAGAATTTTAAGTAGCAAGGAGTCCATGTGTTC
AACTCCAGCATTTCCTGTGTCTCCAGAGACACCGTATGTGAAAACAGCGCTGCGCCATCCTCCGTTCAGC
CCACCTGAGCCCCCGCTGAGCAGCCCAGCCAGTCAGCACAAAGGAGGACGTGAACCACGAAGCTGCCCTG
AGACGCTCACTCACGCTGTGGGGATGTCAGAGAGCCCCATCGGACCCAAATCCACGATGCTCCGGGCTGA
TGCGTCCTCGACGCCCTCCTTTCAGCAGGCTTTTGCTTCTTCCTGCACCATTTCCAGCAACGGCCCTGGG
CAGAGGAGAGAGAGCTCCTCTTCTGCAGAACGCCAGTGGGTGGAGAGCAGCCCCAAGCCCATGGTTTCCC
TGCTGGGGAGCGGCCGGCCCACCGGAAGTCCCCTCAGCGCTGAGTTCTCCGGTACCAGGAAGGACTCCCC
AGTGCTGTCCTGCTTCCCGCCGTCAGAGCTCCAGGCTCCTTTCCACAGCCATGAGCTGTCCCTAGCAGAG
CCACCGGACTCCCTGGCGCCTCCCAGCAGCCAGGCCTTCCTGGGCTTCGGCACCGCCCCAGTGGGAAGTG
GCCTTCCGCCCGAGGAGGACCTGGGGGCCTTGCTGGCCAATTCTCATGGAGCGTCACCGACCCCCAGCAT
CCCGCTGACAGCGACAGGGGCTGCCGACAATGGCTTCCTGTCCCACAACTTTCTCACGGTGGCGCCTGGA
CACAGCAGCCACCACAGTCCAGGCCTGCAGGGCCAGGGTGTGACCCTGCCCGGGCAGCCACCCCTCCCTG
AGAAGAAGCGGGCCTCGGAGGGGGATCGTTCTTTGGGCTCAGTCTCTCCCTCCTCCAGTGGCTTCTCCAG
CCCGCACAGCGGGAGCACCATCAGTATCCCCTTCCCAAATGTCCTTCCCGACTTTTCCAAGGCTTCAGAA
GCGGCCTCACCTCTGCCAGATAGTCCAGGTGATAAACTTGTGATCGTGAAATTTGTTCAAGACACTTCCA
AGTTCTGGTACAAGGCGGATATTTCAAGAGAACAAGCCATCGCCATGTTGAAGGACAAGGAGCCGGGCTC
ATTCATTGTTCGAGACAGCCATTCCTTCCGAGGGGCCTATGGCCTGGCCATGAAGGTGGCCACGCCCCCA
CCTTCAGTCCTGCAGCTGAACAAGAAAGCTGGAGATTTGGCCAATGAACTCGTCCGGCACTTTTTGATCG
AGTGTACCCCGAAGGGAGTGCGGTTGAAAGGGTGCTCGAATGAACCATATTTCGGGAGCCTGACGGCCTT
GGTGTGCCAGCATTCCATCACGCCCTTGGCCTTGCCGTGCAAGCTGCTTATCCCAGAGAGAGATCCATTG
GAGGAAATAGCAGAAAGTTCTCCCCAGACGGCAGCCAATTCAGCAGCTGAGCTGTTGAAGCAGGGGGCAG
CCTGCAATGTGTGGTACTTGAACTCTGTGGAGATGGAGTCCCTCACCGGCCACCAGGCGATCCAGAAGGC
CCTGAGCATCACCCTGGTCCAGGAGCCTCCACCTGTGTCCACAGTTGTGCACTTCAAGGTGTCAGCCCAG
GGCATCACCCTGACAGACAATCAGAGGAAGCTCTTCTTCCGGAGGCATTACCCCGTGAACAGTGTGATTT
TCTGTGCCTTGGACCCACAAGACAGGAAGTGGATCAAAGATGGCCCTTCCTCAAAAGTCTTTGGATTTGT
GGCCCGGAAGCAGGGCAGTGCCACGGATAATGTGTGCCACCTGTTTGCAGAGCATGACCCTGAGCAGCCT
GCCAGTGCCATTGTCAACTTCGTATCAAAGGTCATGATTGGTTCCCCAAAGAAGGTCTGA

Translation (1559 aa):
MRLRALTPGPPGGFARGTRSRRRRRQPEELTSSLHAFKNKAFKKSKVCGVCKQIIDGQGISCRACKYSCH
KKCEAKVVIPCGVQVRLEQAPGSSTLSSSLCRDKPLRPVILSPTMEEGHGLDLTYITERIIAVSFPAGCS
EESYLHNLQEVTRMLKSKHGDNYLVLNLSEKRYDLTKLNPKIMDVGWPELHAPPLDKMCTICKAQESWLN
SNLQHVVVIHCRGGKGRIGVVISSYMHFTNVSASADQALDRFAMKKFYDDKVSALMQPSQKRYVQFLSGL
LSGSVKMNASPLFLHFVILHGTPNFDTGGVCRPFLKLYQAMQPVYTSGIYNVGPENPSRICIVIEPAQLL
KGDVMVKCYHKKYRSATRDVIFRLQFHTGAVQGYGLVFGKEDLDNASKDDRFPDYGKVELVFSATPEKIQ
GSEHLYNDHGVIVDYNTTDPLIRWDSYENLSADGEVLHTQGPVDGSLYAKVRKKSSSDPGIPGGPQAIPA
TNSPDHSDHTLSVSSDSGHSTASARTDKTEERLAPGTRRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTD
ARSKYSGTRHVVPAQVHVNGDAALKDRETDILDDEMPHHDLHSVDSLGTLSSSEGPQSAHLGPFTCHKSS
QNSLLSDGFGSNVGEDPQGTLVPDLGLGMDGPYERERTFGSREPKQPQPLLRKPSVSAQMQAYGQSSYST
QTWVRQQQMVVAHQYSFAPDGEARLVSRCPADNPGLVQAQPRVPLTPTRGTSSRVAVQRGVGSGPHPPDT
QQPSPSKAFKPRFPGDQVVNGAGPELSTGPSPGSPTLDIDQSIEQLNRLILELDPTFEPIPTHMNALGSQ
ANGSVSPDSVGGGLRASSRLPDTGEGPSRATGRQGSSAEQPLGGRLRKLSLGQYDNDAGGQLPFSKCAWG
KAGVDYAPNLPPFPSPADVKETMTPGYPQDLDIIDGRILSSKESMCSTPAFPVSPETPYVKTALRHPPFS
PPEPPLSSPASQHKGGREPRSCPETLTHAVGMSESPIGPKSTMLRADASSTPSFQQAFASSCTISSNGPG
QRRESSSSAERQWVESSPKPMVSLLGSGRPTGSPLSAEFSGTRKDSPVLSCFPPSELQAPFHSHELSLAE
PPDSLAPPSSQAFLGFGTAPVGSGLPPEEDLGALLANSHGASPTPSIPLTATGAADNGFLSHNFLTVAPG
HSSHHSPGLQGQGVTLPGQPPLPEKKRASEGDRSLGSVSPSSSGFSSPHSGSTISIPFPNVLPDFSKASE
AASPLPDSPGDKLVIVKFVQDTSKFWYKADISREQAIAMLKDKEPGSFIVRDSHSFRGAYGLAMKVATPP
PSVLQLNKKAGDLANELVRHFLIECTPKGVRLKGCSNEPYFGSLTALVCQHSITPLALPCKLLIPERDPL
EEIAESSPQTAANSAAELLKQGAACNVWYLNSVEMESLTGHQAIQKALSITLVQEPPPVSTVVHFKVSAQ
GITLTDNQRKLFFRRHYPVNSVIFCALDPQDRKWIKDGPSSKVFGFVARKQGSATDNVCHLFAEHDPEQP
ASAIVNFVSKVMIGSPKKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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