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Report for CCDS94140.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94140.1 Public Homo sapiens 7 PTTG1IP2 24 110 108 CCDS HistoryNCBI Gene:102723899Re-query CCDS DB by CCDS ID:94140.1Re-query CCDS DB by GeneID:102723899See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 94140.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000509356.2 ENSP00000504097.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000509356.2Link to Ensembl Protein Viewer:ENSP00000504097.1Re-query CCDS DB by Nucleotide ID:ENST00000509356Re-query CCDS DB by Protein ID:ENSP00000504097
Original member Current member NCBI NM_001365443.2 NP_001352372.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001365443.2Link to Protein Sequence:NP_001352372.1Re-query CCDS DB by Nucleotide ID:NM_001365443Re-query CCDS DB by Protein ID:NP_001352372Link to BLAST:NP_001352372.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352372.1 154 P0DTF9 154 100% 0 0

Chromosomal Locations for CCDS 94140.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 90469787 90469931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90479228 90479274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90487327 90487420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90488871 90488964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90492239 90492309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90494367 90494380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGTGCTGGCTGCGGGCATGGGGCCAGATCCTCCTGCCAGTTTTCCTCTCCCTCTTTCTCATCCAATTGC
TTATCAGCTTCTCAGAGAATGGTTTTATCCACAGCCCCAGGAACAATCAGAAACCAAGAGATGGGAATGA
AGAGGAATGTGCTGTAAAGAAGAGTTGTCAATTGTGCACAGAAGATAAGAAATGTGTTTGGTGTAGTGAA
GAAAAAGCATGCAAAAAATACTGTTTTCCCTATTTCGGTTGTCGATTCAGTTCTATATATTGGTTAAACT
GTAAAGTTGACATGTTTGGAATCATGATGCTTCTACTCATTGCAGTATTAATTACAGGATTCGTTTGGTA
CTGCTGCGCCTATCACTTTTACCTGCAGGATTTGAACAGAAATCGTGTCTATTTTTATGGAAGACGAGAA
ACAGTTCCTATTCACGACCGCAGTGCTACTGTATATGATGAATAG

Translation (154 aa):
MCWLRAWGQILLPVFLSLFLIQLLISFSENGFIHSPRNNQKPRDGNEEECAVKKSCQLCTEDKKCVWCSE
EKACKKYCFPYFGCRFSSIYWLNCKVDMFGIMMLLLIAVLITGFVWYCCAYHFYLQDLNRNRVYFYGRRE
TVPIHDRSATVYDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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