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Report for CCDS9424.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9424.1 Public Homo sapiens 13 KCNRG 24 110 108 CCDS HistoryNCBI Gene:283518Re-query CCDS DB by CCDS ID:9424.1Re-query CCDS DB by GeneID:283518See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9424.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312942.2 ENSP00000324191.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000312942.2Link to Ensembl Protein Viewer:ENSP00000324191.1Re-query CCDS DB by Nucleotide ID:ENST00000312942Re-query CCDS DB by Protein ID:ENSP00000324191
Original member Current member NCBI NM_173605.2 NP_775876.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173605.2Link to Protein Sequence:NP_775876.1Re-query CCDS DB by Nucleotide ID:NM_173605Re-query CCDS DB by Protein ID:NP_775876Link to BLAST:NP_775876.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775876.1 272 Q8N5I3-1 272 100% 0 0

Chromosomal Locations for CCDS 9424.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 50015494 50016071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 50020214 50020454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGAGTAGTCAGGAACTGGTCACTTTGAATGTGGGAGGGAAGATATTCACGACAAGGTTTTCTACGATAA
AGCAGTTTCCTGCTTCTCGTTTGGCACGCATGTTAGATGGCAGAGACCAAGAATTCAAGATGGTTGGTGG
CCAGATTTTTGTAGACAGAGATGGTGATTTGTTTAGTTTCATCTTAGATTTTTTGAGAACTCACCAGCTT
TTATTACCCACTGAATTTTCAGACTATCTTAGGCTTCAGAGAGAGGCTCTTTTCTATGAACTTCGTTCTC
TAGTTGATCTCTTAAACCCATACCTGCTACAGCCAAGACCTGCTCTTGTGGAGGTACATTTCCTAAGCCG
GAACACTCAAGCTTTTTTCAGGGTGTTTGGCTCTTGCAGCAAAACAATTGAGATGCTAACAGGGAGGATT
ACAGTGTTTACAGAACAACCTTCAGCGCCGACCTGGAATGGTAACTTTTTCCCTCCTCAGATGACCTTAC
TTCCACTGCCTCCACAAAGACCTTCTTACCATGACCTGGTTTTCCAGTGTGGTTCTGACAGCACTACTGA
TAACCAAACTGGAGTCAGGTATGTTTCTATAAAACCTGATAACCGAAAATTGGCCAACGGAACAAATGTC
CTCGGCTTACTGATTGACACTTTATTAAAGGAAGGCTTTCATTTGGTCAGCACTAGAACAGTATCTTCTG
AAGACAAAACTGAATGCTATAGCTTTGAAAGGATAAAAAGCCCTGAAGTGCTCATCACGAATGAAACACC
AAAACCAGAGACTATCATCATACCAGAGCAATCTCAGATAAAGAAATGA

Translation (272 aa):
MSSQELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQEFKMVGGQIFVDRDGDLFSFILDFLRTHQL
LLPTEFSDYLRLQREALFYELRSLVDLLNPYLLQPRPALVEVHFLSRNTQAFFRVFGSCSKTIEMLTGRI
TVFTEQPSAPTWNGNFFPPQMTLLPLPPQRPSYHDLVFQCGSDSTTDNQTGVRYVSIKPDNRKLANGTNV
LGLLIDTLLKEGFHLVSTRTVSSEDKTECYSFERIKSPEVLITNETPKPETIIIPEQSQIKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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