NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS94620.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94620.1 Public Homo sapiens X LAS1L 24 110 108 CCDS HistoryNCBI Gene:81887Re-query CCDS DB by CCDS ID:94620.1Re-query CCDS DB by GeneID:81887See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94620.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000676986.1 ENSP00000503577.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676986.1Link to Ensembl Protein Viewer:ENSP00000503577.1Re-query CCDS DB by Nucleotide ID:ENST00000676986Re-query CCDS DB by Protein ID:ENSP00000503577
Original member Current member NCBI NM_001375331.1 NP_001362260.1 Accepted alive Link to Nucleotide Sequence:NM_001375331.1Link to Protein Sequence:NP_001362260.1Re-query CCDS DB by Nucleotide ID:NM_001375331Re-query CCDS DB by Protein ID:NP_001362260Link to BLAST:NP_001362260.1

Chromosomal Locations for CCDS 94620.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 65521266 65521287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65523560 65523707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65524056 65524262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65524965 65525050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65528260 65528369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65529212 65529258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65529594 65529878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65531357 65531438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65532561 65532630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65533610 65533735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 65534480 65534715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1419 nt):
ATGTCGTGGGAATCCGGGGCCGGGCCAGGTCTAGGTTCCCAGGGGATGGATCTCGTGTGGAGTGCGTGGT
ACGGAAAGTGCGTTAAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGCTCAG
CAGGGCCGAGTGGGACCAGGTGACGGTTTATCTGTTCTGTGACGACCATAAGTTGCAGCGGTACGCGCTT
AACCGCATCACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGGCAGTGGCTTCTACTGCTGACC
TGATACGCTGTAAGCTCTTGGATGTAACTGGTGGCTTGGGCACTGATGAACTTAGACTGCTCTATGGCAT
GGCATTGGTCAGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAGTTTGCCAAGGTCCCCCTCAAGTGT
CTGGCTCAAGAGGTAAATATTCCGGATTGGATTGTTGACCTTCGCCATGAGTTGACCCACAAGAAAATGC
CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTGTCCTGGATTGGCTCCAGAAGACCTATTGGTGCCG
CCAACTGGAGAACAGCCTGAGAGAGACCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGGAAGAGGAT
CAAGAGGAAGATAAGAACATTGTTGTTGATGACATCACAGAACAGAAACCAGAGCCTCAGGATGATGGGA
AAAGTACGGAGTCAGATGTAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATTCTCATTGCAA
AAAGGCCCTGAGTCATAAAGAGCTATATGAAAGAGCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG
TTTACGGTGCTGGAGAAATTTAGGTATTTACCTAAGGCCATTAAGGCGTGGAATAACCCGTCCCCACGTG
TAGAATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGAGAACAGGGAGGCTGTGCTGGATGCTTTTCT
GGATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGAAAACGTG
GACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCTGCTCAGGGGCCTGCACT
CCCAGAACTTCACGCAGGCCCTATTGGAGAGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGCGGGAT
CCGGCCTACCTACATCCTCAGATGGACCGTTGAACTGATCGTGGCCAACACCAAGACTGGACGGAATGCT
CGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTG
ACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGC
TGTCCTTGGTGGGAGCTGA

Translation (472 aa):
MSWESGAGPGLGSQGMDLVWSAWYGKCVKGKGSLPLSAHGIVVAWLSRAEWDQVTVYLFCDDHKLQRYAL
NRITVWRSRSGNELPLAVASTADLIRCKLLDVTGGLGTDELRLLYGMALVRFVNLISERKTKFAKVPLKC
LAQEVNIPDWIVDLRHELTHKKMPHINDCRRGCYFVLDWLQKTYWCRQLENSLRETWELEEFREGIEEED
QEEDKNIVVDDITEQKPEPQDDGKSTESDVKADGDSKGSEEVDSHCKKALSHKELYERARELLVSYEEEQ
FTVLEKFRYLPKAIKAWNNPSPRVECVLAELKGVTCENREAVLDAFLDDGFLVPTFEQLAALQIEYEENV
DLNDVLVPKPFSQFWQPLLRGLHSQNFTQALLERMLSELPALGISGIRPTYILRWTVELIVANTKTGRNA
RRFSAGQWEARRGWRLFNCSASLDWPRMVESCLGSPCWASPQLLRIAVLGGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH