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Report for CCDS9478.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9478.1 Public Homo sapiens 13 DZIP1 24 110 108 CCDS HistoryNCBI Gene:22873Re-query CCDS DB by CCDS ID:9478.1Re-query CCDS DB by GeneID:22873See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9478.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000347108.7 ENSP00000257312.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000347108.7Link to Ensembl Protein Viewer:ENSP00000257312.5Re-query CCDS DB by Nucleotide ID:ENST00000347108Re-query CCDS DB by Protein ID:ENSP00000257312
Original member Current member EBI ENST00000376829.7 ENSP00000366025.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376829.7Link to Ensembl Protein Viewer:ENSP00000366025.2Re-query CCDS DB by Nucleotide ID:ENST00000376829Re-query CCDS DB by Protein ID:ENSP00000366025
Original member Current member NCBI NM_198968.4 NP_945319.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198968.4Link to Protein Sequence:NP_945319.1Re-query CCDS DB by Nucleotide ID:NM_198968Re-query CCDS DB by Protein ID:NP_945319Link to BLAST:NP_945319.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_945319.1 867 Q86YF9-1 867 100% 0 0

Chromosomal Locations for CCDS 9478.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 95582234 95582313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95584736 95584910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95586006 95586136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95587539 95587729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95589154 95589207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95589803 95589932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95590279 95590441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95593944 95594086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95599365 95599424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95606003 95606059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95609457 95609513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95611445 95611493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95612037 95612177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95619885 95619947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95622343 95622480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95624768 95624929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95629989 95630113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95633234 95633321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95641295 95641855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95641994 95642029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2604 nt):
ATGCAAGCTGAGGCAGCGGATTGGTTTTCAAGCATGCCCTTCCAGAAGCATGTCTACTACCCGCTCGCCA
GCGGCCCAGAGGGGCCCGACGTCGCTGTGGCCGCCGCCGCCGCGGGTGCGGCCTCCATGGCCTGTGCGCC
CCCCAGCGCGGCTTCGGGGCCCCTGCCCTTCTTCCAGTTCAGGCCGCGGCTGGAGAGTGTGGACTGGCGG
CGGCTGAGCGCCATCGACGTGGACAAGGTGGCGGGGGCTGTGGACGTGCTGACGCTGCAGGAGAACATCA
TGAACATCACCTTCTGCAAGCTGGAAGACGAGAAGTGCCCACACTGCCAGTCGGGGGTGGACCCGGTGCT
GCTGAAGCTCATCCGTCTGGCGCAGTTCACCATCGAGTACTTGCTGCACTCACAAGAGTTCCTCACCTCG
CAGCTGCACACCCTGGAGGAGCGGCTGCGCCTGAGCCACTGCGACGGCGAGCAGAGCAAGAAGCTGCTCA
CCAAGCAGGCGGGGGAGATCAAGACGCTCAAGGAAGAGTGCAAACGCCGGAAGAAGATGATCTCCACCCA
GCAGCTGATGATCGAGGCCAAAGCCAACTATTACCAGTGCCATTTTTGTGACAAGGCCTTTATGAACCAA
GCTTTTCTACAAAGTCACATTCAACGCCGCCACACTGAAGAAAATTCTCATTTTGAGTATCAGAAAAATG
CACAGATTGAGAAGCTCCGGAGTGAGATCGTCGTATTGAAGGAAGAGCTGCAGCTCACCAGGTCTGAGCT
AGAGGCTGCACACCATGCCAGTGCAGTCAGATTCTCCAAGGAATATGAAATGCAGAAAACAAAAGAGGAA
GACTTTTTGAAGTTATTTGACAGGTGGAAAGAAGAAGAAAAGGAGAAACTAGTTGATGAAATGGAAAAAG
TCAAGGAGATGTTTATGAAGGAATTTAAAGAATTAACTTCGAAGAATTCAGCATTAGAATATCAACTGTC
AGAAATCCAGAAGTCCAATATGCAGATCAAGTCCAACATAGGCACATTAAAAGATGCACACGAGTTTAAA
GAAGACCGTTCTCCATATCCCCAGGATTTCCATAATGTCATGCAGCTTCTTGATAGTCAGGAAAGCAAAT
GGACAGCTCGAGTTCAAGCTATTCATCAAGAACACAAGAAAGAGAAGGGTCGGCTCCTGTCACATATAGA
GAAACTTCGAACCTCAATGATAGATGATCTAAATGCAAGCAATGTTTTCTATAAGAAAAGGATAGAAGAG
CTAGGGCAGAGACTCCAGGAGCAGAATGAGCTGATTATAACTCAGAGACAGCAGATTAAAGACTTTACCT
GTAATCCATTAAACAGTATCAGTGAACCCAAAGGAAATCCTTTAGCCTGGCAGGCTTTTGAATCTCAGCC
AGCTGCTCCAGCTGTGCCTATGAATGCCCCAGCCCTGCACACTTTGGAAACTAAATCAAGTCTGCCAATG
GTGCATGAACAGGCATTCTCGTCGCACATACTGGAACCAATAGAAGAACTTTCAGAGGAAGAAAAAGGAA
GGGAAAATGAACAGAAATTAAATAACAACAAAATGCATTTAAGGAAAGCTTTGAAGAGTAACTCCTCCCT
CACTAAGGGACTAAGAACAATGGTGGAGCAGAACTTGATGGAGAAACTGGAAACCTTGGGGATTAATGCA
GATATACGTGGCATTTCAAGTGATCAGTTGCATAGAGTACTAAAAAGTGTGGAATCAGAAAGACATAAGC
AAGAAAGAGAAATACCTAACTTTCATCAAATTCGAGAATTCCTTGAACATCAAGTCAGCTGTAAAATTGA
GGAGAAAGCACTACTCTCTTCAGATCAGTGCAGTGTTTCTCAAATGGATACCCTTTCAACTGGAGAAGTA
CCCAAAATGATACAACTTCCTTCCAAAAACAGACAACTGATTAGACAAAAAGCTGTTTCTACTGATAGGA
CATCTGTTCCAAAAATTAAGAAAAATGTCATGGAAGATCCTTTTCCCAGAAAGTCTTCAACTATTACGAC
CCCTCCTTTTAGTTCAGAGGAGGAGCAGGAGGACGACGACCTCATCCGGGCATACGCATCCCCAGGCCCA
CTTCCTGTGCCGCCACCACAAAACAAGGGCAGCTTCGGGAAGAACACAGTGAAAAGTGACGCGGACGGGA
CCGAGGGAAGCGAAATCGAGGACACTGATGATTCTCCCAAGCCCGCAGGAGTCGCCGTTAAAACACCTAC
TGAAAAAGTTGAAAAGATGTTTCCACATCGCAAAAATGTGAACAAACCAGTCGGTGGAACTAATGTCCCT
GAGATGTTTATCAAAAAAGAAGAATTACAAGAACTAAAGTGTGCGGATGTGGAGGATGAAGACTGGGACA
TATCATCCCTAGAGGAAGAGATATCTTTGGGAAAAAAATCTGGGAAAGAACAGAAGGAACCTCCACCTGC
GAAAAATGAACCACATTTTGCTCATGTGCTAAATGCCTGGGGCGCATTTAATCCTAAGGGGCCAAAGGGA
GAAGGACTTCAAGAAAATGAATCAAGCACATTAAAAAGCAGCTTAGTAACTGTGACTGATTGGAGCGACA
CTTCAGATGTCTAA

Translation (867 aa):
MQAEAADWFSSMPFQKHVYYPLASGPEGPDVAVAAAAAGAASMACAPPSAASGPLPFFQFRPRLESVDWR
RLSAIDVDKVAGAVDVLTLQENIMNITFCKLEDEKCPHCQSGVDPVLLKLIRLAQFTIEYLLHSQEFLTS
QLHTLEERLRLSHCDGEQSKKLLTKQAGEIKTLKEECKRRKKMISTQQLMIEAKANYYQCHFCDKAFMNQ
AFLQSHIQRRHTEENSHFEYQKNAQIEKLRSEIVVLKEELQLTRSELEAAHHASAVRFSKEYEMQKTKEE
DFLKLFDRWKEEEKEKLVDEMEKVKEMFMKEFKELTSKNSALEYQLSEIQKSNMQIKSNIGTLKDAHEFK
EDRSPYPQDFHNVMQLLDSQESKWTARVQAIHQEHKKEKGRLLSHIEKLRTSMIDDLNASNVFYKKRIEE
LGQRLQEQNELIITQRQQIKDFTCNPLNSISEPKGNPLAWQAFESQPAAPAVPMNAPALHTLETKSSLPM
VHEQAFSSHILEPIEELSEEEKGRENEQKLNNNKMHLRKALKSNSSLTKGLRTMVEQNLMEKLETLGINA
DIRGISSDQLHRVLKSVESERHKQEREIPNFHQIREFLEHQVSCKIEEKALLSSDQCSVSQMDTLSTGEV
PKMIQLPSKNRQLIRQKAVSTDRTSVPKIKKNVMEDPFPRKSSTITTPPFSSEEEQEDDDLIRAYASPGP
LPVPPPQNKGSFGKNTVKSDADGTEGSEIEDTDDSPKPAGVAVKTPTEKVEKMFPHRKNVNKPVGGTNVP
EMFIKKEELQELKCADVEDEDWDISSLEEEISLGKKSGKEQKEPPPAKNEPHFAHVLNAWGAFNPKGPKG
EGLQENESSTLKSSLVTVTDWSDTSDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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