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Report for CCDS9684.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9684.1 Public Homo sapiens 14 MIS18BP1 24 110 108 CCDS HistoryNCBI Gene:55320Re-query CCDS DB by CCDS ID:9684.1Re-query CCDS DB by GeneID:55320See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9684.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310806.9 ENSP00000309790.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310806.9Link to Ensembl Protein Viewer:ENSP00000309790.4Re-query CCDS DB by Nucleotide ID:ENST00000310806Re-query CCDS DB by Protein ID:ENSP00000309790
Original member Current member NCBI NM_018353.5 NP_060823.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018353.5Link to Protein Sequence:NP_060823.3Re-query CCDS DB by Nucleotide ID:NM_018353Re-query CCDS DB by Protein ID:NP_060823Link to BLAST:NP_060823.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060823.3 1132 Q6P0N0-1 1132 100% 0 0

Chromosomal Locations for CCDS 9684.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 45204109 45204212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45204399 45204453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45206083 45206170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45210380 45210528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45217019 45217179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45218282 45218454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45223918 45224746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45226743 45226836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45227663 45227814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45231141 45231298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45232733 45232820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45235814 45235944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45237648 45237721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45242034 45242518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45242761 45242874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45246743 45247286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3399 nt):
ATGATTGCAACACCTTTGAAACATTCAAGAATTTACTTACCTCCAGAGGCATCTTCTCAAAGGAGAAATC
TACCCATGGATGCAATCTTTTTTGACAGCATTCCTTCAGGCACACTTACTCCTGTAAAAGATTTGGTGAA
ATATCAGAACTCCTCCTTAAAATTGAATGACCATAAAAAGAATCAGTTCCTAAAAATGACAACTTTTAAC
AATAAAAATATATTTCAATCAACTATGCTAACAGAGGCTACTACCTCTAACAGTTCTCTTGATATCAGTG
CTATAAAGCCCAACAAGGATGGATTAAAAAATAAAGCAAACTATGAATCACCAGGAAAAATATTTCTAAG
AATGAAAGAAAAAGTACTGCGTGACAAGCAAGAACAGCCATCAAGAAACAGTAGTTTGTTGGAACCACAG
AAAAGTGGAAATAATGAAACCTTCACTCCTAACAGAGTTGAAAAAAAAAAATTGCAGCATACCTACCTAT
GTGAAGAAAAGGAAAACAACAAATCATTCCAGTCAGATGACAGTTCACTAAGAGCCTCAGTCCAAGGAGT
TCCTCTAGAATCATCAAATAATGATATTTTCCTCCCGGTCAAACAAAAGATTCAGTGCCAGCAGGAAAAG
AAAGCACCACTGCACAATTTAACTTACGAACTTCCAACTCTGAACCAAGAACAGGAAAATTTTTTGGCTG
TAGAAGCCCGAAACAAGACATTAACTAGAGCTCAGTTGGCTAAACAAATTTTTCACTCAAAGGAGAGTAT
AGTTGCAACCACTAAATCCAAAAAGGACACGTTTGTTTTAGAAAGCGTTGATTCTGCTGATGAACAATTT
CAAAATACTAATGCTGAGACTCTCAGTACTAATTGTATTCCTATTAAAAATGGCAGCCTGTTAATGGTTT
CTGATAGTGAGAGGACAACAGAAGGGACTTCGCAACAGAAAGTTAAGGAAGGAAATGGAAAAACAGTGCC
TGGAGAGACAGGTCTTCCAGGTTCCATGAAAGATACATGTAAAATTGTACTTGCAACACCAAGACTTCAT
ATAACAATACCTCGGAGGTCAAAAAGAAATATTTCAAAGCTTTCTCCTCCAAGAATATTTCAAACTGTTA
CAAATGGACTTAAAAAAAATCAGGTAGTTCAGCTACAGGAATGGATGATTAAAAGCATCAATAATAATAC
TGCTATATGTGTAGAAGGAAAATTGATAGACGTCACTAACATATATTGGCACAGTAATGTAATTATAGAG
CGGATTGAGCACAACAAACTTAGGACTATATCAGGCAACGTTTATATATTAAAAGGCATGATAGACCAAA
TTTCCATGAAAGAAGCAGGATATCCAAATTATCTCATAAGGAAATTTATGTTTGGATTTCCAGAAAATTG
GAAAGAGCACATTGATAATTTTCTGGAACAATTAAGGGCTGGTGAAAAGAACAGGGAAAAGACCAAACAA
AAACAGAAAACTGGAAGATCTGTCCGTGACATAAGGAAATCAATGAAAAATGATGCACGAGAAAACCAAA
CAGATACTGCTCAAAGAGCCACCACCACTTACGATTTTGATTGTGATAATTTGGAACTGAAGAGTAATAA
GCACAGTGAGTCACCAGGAGCTACAGAATTAAACATGTGCCACAGTAATTGCCAAAATAAACCAACATTA
AGGTTCCCAGATGACCAAGTAAATAATACTATTCAAAATGGAGGAGGAGATGACTTATCTAATCAGGAAT
TAATTGGAAAAAAAGAATATAAAATGTCTTCAAAGAAACTAAAAATTGGTGAAAGAACAAATGAAAGGAT
AATAAAAAGTCAGAAGCAAGAGACAACTGAAGAATTGGATGTATCCATTGATATTCTAACCTCAAGGGAA
CAGTTTTTCTCAGATGAAGAAAGAAAATACATGGCCATCAATCAGAAGAAAGCTTATATTTTAGTAACAC
CACTTAAATCTAGAAAAGTGATAGAGCAAAGATGCATGAGGTATAATCTGTCCGCTGGCACCATCAAAGC
AGTAACAGATTTTGTAATACCAGAGTGTCAAAAAAAAAGTCCCATCAGCAAGTCCATGGGGACTTTAGAA
AATACATTTGAAGGTCATAAAAGTAAAAACAAGGAAGATTGCGATGAACGTGACTTACTTACTGTCAACC
GGAAAATAAAAATATCTAACCTTGAAAAGGAACAAATGCTCACCTCTGACTTTAAGAAAAATACCAGACT
ATTACCAAAATTGAAGAAAATAGAAAATCAGGTAGCTATGTCATTTTATAAGCATCAGTCCTCACCAGAT
TTGTCAAGTGAAGAAAGTGAAACAGAAAAGGAAATTAAAAGGAAAGCTGAAGTTAAGAAAACCAAAGCAG
GAAACACCAAAGAAGCAGTGGTTCACCTGAGAAAGAGCACAAGAAACACAAGTAATATTCCAGTGATTTT
GGAACCTGAAACTGAAGAAAGTGAAAATGAATTTTATATCAAACAAAAGAAAGCTAGACCTTCCGTCAAA
GAAACTCTTCAGAAGTCTGGTGTTAGGAAAGAGTTTCCAATTACTGAGGCAGTAGGATCTGATAAGACAA
ATAGGCATCCCTTAGAATGCTTACCTGGTTTAATTCAGGATAAGGAATGGAATGAGAAGGAGTTACAGAA
ACTTCATTGTGCTTTTGCATCTCTTCCAAAGCACAAACCTGGTTTCTGGTCAGAGGTAGCTGCGGCTGTA
GGTTCTCGATCTCCTGAAGAATGCCAGAGGAAATACATGGAAAATCCCAGAGGAAAAGGATCCCAGAAAC
ATGTCACTAAGAAGAAGCCAGCCAATTCCAAAGGCCAAAATGGCAAGAGAGGTGATGCTGATCAGAAACA
AACTATTAAGATAACTGCCAAAGTGGGAACTCTTAAAAGGAAGCAACAGATGAGGGAATTTCTGGAACAG
TTGCCAAAAGATGACCATGATGATTTTTTCAGTACAACACCTTTACAGCATCAAAGAATACTGTTGCCAA
GTTTCCAGGACAGTGAAGATGATGATGATATTCTGCCAAATATGGACAAAAATCCAACAACTCCATCATC
AGTTATCTTTCCATTGGTAAAAACTCCTCAATGTCAGCATGTCAGTCCTGGCATGCTAGGTTCTATAAAT
AGGAATGACTGTGATAAATATGTTTTTCGTATGCAAAAATATCATAAAAGTAATGGTGGTATTGTCTGGG
GCAACATCAAGAAAAAATTAGTTGAAACTGATTTCTCAACTCCAACACCAAGAAGGAAAACCCCATTTAA
CACAGACTTAGGAGAAAACTCTGGTATTGGAAAACTTTTCACTAATGCTGTGGAATCTTTAGATGAAGAA
GAGAAAGATTATTATTTTTCGAACTCTGATTCTGCATAG

Translation (1132 aa):
MIATPLKHSRIYLPPEASSQRRNLPMDAIFFDSIPSGTLTPVKDLVKYQNSSLKLNDHKKNQFLKMTTFN
NKNIFQSTMLTEATTSNSSLDISAIKPNKDGLKNKANYESPGKIFLRMKEKVLRDKQEQPSRNSSLLEPQ
KSGNNETFTPNRVEKKKLQHTYLCEEKENNKSFQSDDSSLRASVQGVPLESSNNDIFLPVKQKIQCQQEK
KAPLHNLTYELPTLNQEQENFLAVEARNKTLTRAQLAKQIFHSKESIVATTKSKKDTFVLESVDSADEQF
QNTNAETLSTNCIPIKNGSLLMVSDSERTTEGTSQQKVKEGNGKTVPGETGLPGSMKDTCKIVLATPRLH
ITIPRRSKRNISKLSPPRIFQTVTNGLKKNQVVQLQEWMIKSINNNTAICVEGKLIDVTNIYWHSNVIIE
RIEHNKLRTISGNVYILKGMIDQISMKEAGYPNYLIRKFMFGFPENWKEHIDNFLEQLRAGEKNREKTKQ
KQKTGRSVRDIRKSMKNDARENQTDTAQRATTTYDFDCDNLELKSNKHSESPGATELNMCHSNCQNKPTL
RFPDDQVNNTIQNGGGDDLSNQELIGKKEYKMSSKKLKIGERTNERIIKSQKQETTEELDVSIDILTSRE
QFFSDEERKYMAINQKKAYILVTPLKSRKVIEQRCMRYNLSAGTIKAVTDFVIPECQKKSPISKSMGTLE
NTFEGHKSKNKEDCDERDLLTVNRKIKISNLEKEQMLTSDFKKNTRLLPKLKKIENQVAMSFYKHQSSPD
LSSEESETEKEIKRKAEVKKTKAGNTKEAVVHLRKSTRNTSNIPVILEPETEESENEFYIKQKKARPSVK
ETLQKSGVRKEFPITEAVGSDKTNRHPLECLPGLIQDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAV
GSRSPEECQRKYMENPRGKGSQKHVTKKKPANSKGQNGKRGDADQKQTIKITAKVGTLKRKQQMREFLEQ
LPKDDHDDFFSTTPLQHQRILLPSFQDSEDDDDILPNMDKNPTTPSSVIFPLVKTPQCQHVSPGMLGSIN
RNDCDKYVFRMQKYHKSNGGIVWGNIKKKLVETDFSTPTPRRKTPFNTDLGENSGIGKLFTNAVESLDEE
EKDYYFSNSDSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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