NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9712.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9712.1 Public Homo sapiens 14 GNPNAT1 24 110 108 CCDS HistoryNCBI Gene:64841Re-query CCDS DB by CCDS ID:9712.1Re-query CCDS DB by GeneID:64841See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9712.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216410.8 ENSP00000216410.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216410.8Link to Ensembl Protein Viewer:ENSP00000216410.3Re-query CCDS DB by Nucleotide ID:ENST00000216410Re-query CCDS DB by Protein ID:ENSP00000216410
Original member Current member EBI ENST00000650397.1 ENSP00000496934.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650397.1Link to Ensembl Protein Viewer:ENSP00000496934.1Re-query CCDS DB by Nucleotide ID:ENST00000650397Re-query CCDS DB by Protein ID:ENSP00000496934
Original member Current member NCBI NM_198066.4 NP_932332.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198066.4Link to Protein Sequence:NP_932332.1Re-query CCDS DB by Nucleotide ID:NM_198066Re-query CCDS DB by Protein ID:NP_932332Link to BLAST:NP_932332.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932332.1 184 Q96EK6 184 100% 0 0

Chromosomal Locations for CCDS 9712.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 52778311 52778458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52780679 52780740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52781784 52781911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52783423 52783485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52784497 52784650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGAAACCTGATGAAACTCCTATGTTTGACCCAAGTCTACTCAAAGAAGTGGACTGGAGTCAGAATACAG
CTACATTTTCTCCAGCCATTTCCCCAACACATCCTGGAGAAGGCTTGGTTTTGAGGCCTCTTTGTACTGC
TGACTTAAATAGAGGTTTTTTTAAGGTATTGGGTCAGCTAACAGAGACTGGAGTTGTCAGCCCTGAACAA
TTTATGAAATCTTTTGAGCATATGAAGAAATCTGGGGATTATTATGTTACAGTTGTAGAAGATGTGACTC
TAGGACAGATTGTTGCTACGGCAACTCTGATTATAGAACATAAATTCATCCATTCCTGTGCTAAGAGAGG
AAGAGTAGAAGATGTTGTTGTTAGTGATGAATGCAGAGGAAAGCAGCTTGGCAAATTGTTATTATCAACC
CTTACTTTGCTAAGCAAGAAACTGAACTGTTACAAGATTACCCTTGAATGTCTACCACAAAATGTTGGTT
TCTATAAAAAGTTTGGATATACTGTATCTGAAGAAAACTACATGTGTCGGAGGTTTCTAAAGTAA

Translation (184 aa):
MKPDETPMFDPSLLKEVDWSQNTATFSPAISPTHPGEGLVLRPLCTADLNRGFFKVLGQLTETGVVSPEQ
FMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLST
LTLLSKKLNCYKITLECLPQNVGFYKKFGYTVSEENYMCRRFLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH