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Report for CCDS9781.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9781.1 Public Homo sapiens 14 EIF2S1 24 110 108 CCDS HistoryNCBI Gene:1965Re-query CCDS DB by CCDS ID:9781.1Re-query CCDS DB by GeneID:1965See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9781.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256383.11 ENSP00000256383.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256383.11Link to Ensembl Protein Viewer:ENSP00000256383.4Re-query CCDS DB by Nucleotide ID:ENST00000256383Re-query CCDS DB by Protein ID:ENSP00000256383
Original member Current member EBI ENST00000466499.6 ENSP00000425299.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000466499.6Link to Ensembl Protein Viewer:ENSP00000425299.1Re-query CCDS DB by Nucleotide ID:ENST00000466499Re-query CCDS DB by Protein ID:ENSP00000425299
Original member Current member NCBI NM_004094.5 NP_004085.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004094.5Link to Protein Sequence:NP_004085.1Re-query CCDS DB by Nucleotide ID:NM_004094Re-query CCDS DB by Protein ID:NP_004085Link to BLAST:NP_004085.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004085.1 315 P05198 315 100% 0 0

Chromosomal Locations for CCDS 9781.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 67364768 67365008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67374468 67374547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67376439 67376590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67380659 67380765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67381593 67381690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67382447 67382590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67383315 67383440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGCCGGGTCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAGGTGGAAGATGTAGTGATGGTGAATG
TCAGATCCATTGCTGAAATGGGGGCTTATGTCAGCTTGCTGGAATACAACAACATTGAAGGCATGATTCT
TCTTAGTGAATTATCCAGAAGGCGTATCCGTTCTATCAACAAACTCATCCGAATTGGCAGGAATGAGTGT
GTGGTTGTCATTAGGGTGGACAAAGAAAAAGGATATATTGATTTGTCAAAAAGAAGAGTTTCTCCAGAGG
AAGCAATCAAATGTGAAGACAAATTCACAAAATCCAAAACTGTTTATAGCATTCTTCGTCATGTTGCTGA
GGTGTTAGAATACACCAAGGATGAGCAGCTGGAAAGCCTATTCCAGAGGACTGCCTGGGTCTTTGATGAC
AAGTACAAGAGACCTGGATATGGTGCCTATGATGCATTTAAGCATGCAGTCTCAGACCCATCTATTTTGG
ATAGTTTAGATTTGAATGAAGATGAACGGGAAGTACTCATTAATAATATTAATAGGCGCTTGACCCCACA
GGCTGTCAAAATTCGAGCAGATATTGAAGTGGCTTGTTATGGTTATGAAGGCATTGATGCTGTAAAAGAA
GCCCTAAGAGCAGGTTTGAATTGTTCTACAGAAAACATGCCCATTAAGATTAATCTAATAGCTCCTCCTC
GGTATGTAATGACTACGACAACCCTGGAGAGAACAGAAGGCCTTTCTGTCCTCAGTCAAGCTATGGCTGT
TATCAAAGAGAAGATTGAGGAAAAGAGGGGTGTGTTCAATGTTCAAATGGAGCCCAAAGTGGTCACAGAT
ACAGATGAGACTGAACTTGCGAGGCAGATGGAGAGGCTTGAAAGAGAAAATGCCGAAGTGGATGGAGATG
ATGATGCAGAAGAAATGGAAGCCAAAGCTGAAGATTAA

Translation (315 aa):
MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNEC
VVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDD
KYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKE
ALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTD
TDETELARQMERLERENAEVDGDDDAEEMEAKAED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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