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Report for CCDS9807.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
9807.1 |
Public |
Homo sapiens |
14 |
SIPA1L1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:26037](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:9807.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:26037](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 14 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 9807.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000555818.5 |
ENSP00000450832.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000555818.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000450832.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000555818](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000450832](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001354285.2 |
NP_001341214.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001354285.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001341214.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001354285](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001341214](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001341214.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_015556.4 |
NP_056371.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_015556.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_056371.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_015556](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_056371](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_056371.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 9807.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5415 nt): ATGACCAGCTTGAAACGGTCACAGACAGAAAGGCCTCTTGCCACTGACAGGGCCTCTGTTGTTGGCACAG ACGGCACCCCCAAAGTCCACACTGATGATTTCTACATGCGGCGCTTCCGGTCCCAAAATGGCAGCTTAGG ATCATCAGTTATGGCTCCTGTAGGACCCCCCCGAAGTGAAGGTTCTCACCATATAACCTCAACCCCCGGA GTCCCAAAAATGGGGGTAAGGGCAAGGATTGCAGATTGGCCCCCAAGAAAGGAAAACATAAAAGAATCTA GCCGTTCAAGCCAGGAAATAGAAACCTCAAGTTGCCTTGATAGCCTGTCCTCCAAAAGCAGTCCTGTGAG TCAGGGAAGTTCTGTTAGCCTCAATTCCAATGACTCAGCCATGCTGAAAAGCATACAGAACACGCTGAAA AACAAGACAAGACCGTCGGAGAACATGGACTCCAGATTTCTCATGCCTGAAGCCTACCCCAGCTCCCCCA GAAAAGCTCTTCGCAGAATACGCCAGCGAAGCAACAGTGATATCACCATAAGTGAACTTGATGTGGATAG CTTTGATGAATGTATCTCACCTACATACAAGACTGGACCATCACTGCACAGGGAATATGGTAGCACATCT TCAATTGATAAACAGGGAACATCTGGAGAAAGCTTTTTTGATTTGTTAAAGGGCTACAAAGATGACAAAT CTGATCGAGGTCCAACTCCAACCAAGCTCAGTGACTTTCTCATTACTGGTGGTGGCAAGGGTTCTGGTTT CTCTTTGGATGTAATAGACGGGCCTATCTCACAGAGAGAGAACCTCAGGCTTTTTAAGGAAAGGGAAAAA CCACTCAAGCGACGTTCAAAATCTGAAACTGGAGACTCATCTATTTTTCGTAAATTGCGCAATGCCAAAG GTGAAGAACTTGGGAAGTCATCAGATCTTGAAGATAACCGATCAGAAGACTCTGTCAGGCCCTGGACATG TCCAAAGTGCTTTGCCCACTATGATGTCCAGAGTATATTATTTGATTTGAATGAGGCAATTATGAACAGG CACAATGTTATTAAGAGGAGAAACACCACCACTGGAGCTTCCGCAGCTGCCGTGGCATCCTTGGTCTCTG GACCTCTGTCTCATTCAGCCAGTTTTAGCTCCCCAATGGGCAGCACAGAGGACCTGAATTCCAAAGGAAG CCTCAGCATGGACCAGGGAGATGATAAAAGCAATGAGCTTGTAATGAGCTGTCCATATTTTCGGAATGAG ATAGGTGGAGAAGGGGAGAGGAAAATCAGCCTTTCAAAATCAAATTCTGGCTCCTTTAGTGGATGTGAAA GTGCCTCCTTTGAGTCTACCCTTAGTTCCCATTGCACAAATGCAGGAGTGGCAGTACTTGAAGTGCCCAA GGAGAACTTGGTGTTGCACCTAGATAGAGTGAAAAGATACATCGTGGAACACGTAGATCTGGGTGCATAC TATTATAGAAAATTTTTCTACCAGAAGGAACACTGGAACTATTTTGGGGCTGATGAGAATCTTGGTCCAG TGGCTGTGAGCATTCGAAGGGAAAAACCAGATGAAATGAAAGAAAATGGATCTCCGTACAACTACCGAAT AATTTTTAGAACTAGTGAGCTCATGACACTGAGAGGTTCGGTCCTGGAGGACGCCATTCCGTCGACAGCC AAGCACTCGACAGCCAGAGGCCTGCCTCTCAAAGAAGTGCTGGAGCACGTGGTTCCTGAGCTCAATGTCC AGTGCCTGCGGTTGGCCTTCAACACACCCAAGGTCACAGAGCAGCTCATGAAACTGGATGAACAAGGGCT GAACTACCAGCAGAAAGTAGGCATCATGTACTGCAAAGCTGGACAGAGCACTGAAGAAGAGATGTACAAC AATGAGTCAGCTGGCCCAGCCTTTGAAGAATTTCTTCAACTATTGGGAGAGCGAGTTCGGCTCAAAGGAT TTGAGAAGTATCGAGCACAGCTTGATACCAAAACTGACTCCACTGGAACCCATTCTCTGTACACAACATA CAAAGATTATGAAATTATGTTCCATGTTTCTACCATGCTGCCATACACACCCAACAACAAACAACAGCTC CTGAGGAAGCGGCACATTGGAAATGATATCGTAACAATTGTTTTCCAAGAGCCTGGAGCACAGCCATTCA GCCCAAAAAACATCCGATCCCACTTCCAGCACGTTTTCGTCATCGTCAGGGTGCACAATCCGTGCTCTGA CAGTGTCTGTTATAGTGTGGCTGTTACCAGGTCCAGAGATGTGCCTTCCTTTGGGCCTCCCATTCCTAAA GGGGTCACTTTCCCTAAGTCAAATGTGTTCAGGGACTTCCTTTTGGCGAAAGTGATTAATGCAGAAAATG CTGCTCATAAATCGGAGAAGTTTCGGGCCATGGCAACTCGGACCCGCCAGGAATACCTGAAAGATCTGGC AGAAAAGAATGTCACCAACACCCCTATCGACCCTTCTGGCAAGTTTCCGTTCATCTCTCTGGCTTCCAAG AAGAAGGAAAAGTCTAAGCCATATCCAGGAGCCGAGCTCAGCAGCATGGGGGCCATTGTATGGGCAGTCC GGGCTGAAGACTACAACAAGGCCATGGAACTAGACTGCCTTTTAGGGATCTCCAATGAGTTCATTGTGCT CATTGAACAGGAAACAAAGAGCGTGGTCTTCAATTGTTCCTGTAGAGATGTGATAGGGTGGACTTCAACT GACACCAGCCTCAAAATCTTCTATGAACGAGGAGAATGTGTTTCAGTGGGTAGTTTTATTAACATTGAGG AGATCAAAGAGATTGTCAAAAGGTTGCAGTTTGTTTCAAAAGGCTGTGAATCGGTGGAGATGACTCTGCG AAGAAATGGGCTAGGACAGCTTGGCTTCCATGTCAACTATGAGGGCATTGTGGCGGATGTGGAGCCCTAC GGTTATGCCTGGCAGGCAGGGCTGAGGCAGGGCAGTCGCCTGGTGGAGATCTGCAAGGTGGCGGTAGCCA CTCTGAGCCATGAGCAGATGATCGACCTCCTGAGAACATCTGTCACGGTGAAGGTTGTCATCATTCCCCC GCATGATGACTGCACCCCGCGGAGGAGTTGCTCTGAAACCTACCGCATGCCAGTGATGGAGTACAAAATG AATGAAGGTGTTTCATACGAATTCAAGTTTCCCTTCCGAAATAATAACAAGTGGCAGAGGAACGCCAGCA AGGGGCCTCATTCACCTCAAGTCCCGTCCCAGGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAA AGGAGATGGGAAGATGCCTCCTCCAGAAAGAGCCGCCAACATCCCTCGAAGCATCTCCAGTGACGGGCGC CCACTAGAGAGGCGGCTGTCTCCTGGTTCGGACATCTATGTGACGGTCTCATCCATGGCTTTAGCAAGAT CCCAGTGTCGGAACTCTCCTAGCAACTTGTCTTCATCCAGTGATACTGGTTCTGTGGGGGGCACTTACAG GCAGAAGTCCATGCCCGAAGGGTTTGGAGTGAGCCGTAGATCCCCAGCCTCCATTGACAGGCAGAACACC CAGTCAGATATTGGTGGCAGCGGAAAATCCACGCCTAGCTGGCAAAGAAGTGAGGATAGCATTGCTGACC AGATGGCTTACAGTTATAGAGGACCTCAGGATTTCAATTCTTTTGTCCTCGAGCAGCATGAATATACAGA GCCAACATGCCATCTCCCAGCAGTATCAAAGGTACTGCCAGCTTTCCGAGAGAGCCCCAGTGGGAGATTA ATGCGGCAGGATCCAGTGGTTCATTTGTCTCCAAACAAACAAGGGCATTCTGATAGCCACTACTCGAGCC ACTCCAGTAGCAATACTCTCTCCAGCAATGCGTCAAGTGCCCATAGTGATGAGAAGTGGTACGATGGGGA CCGCACAGAATCCGAACTCAACAGCTATAACTATCTGCAAGGCACCTCTGCTGACAGTGGCATTGACACC ACCTCTTATGGCCCCAGCCACGGCAGCACAGCCTCGCTGGGGGCTGCCACATCGTCACCTCGCTCAGGGC CAGGCAAGGAGAAAGTGGCACCCCTATGGCACAGCTCCAGTGAAGTAATCTCCATGGCAGATCGGACTTT GGAGACAGAGAGCCACGGCCTGGACCGGAAAACAGAGTCTTCCCTGAGCTTAGACATACACAGCAAGAGC CAAGCCGGCTCGACCCCTCTGACAAGGGAGAACAGCACCTTCAGTATAAACGATGCTGCTTCCCACACAA GTACCATGAGCTCCCGACACTCTGCCAGCCCAGTGGTTTTCACCAGTGCCCGGAGTTCACCTAAAGAAGA GCTTCATCCAGCTGCCCCCTCACAGCTCGCACCATCCTTCTCCTCCTCTTCCTCCTCCTCCTCTGGTCCT AGGAGTTTTTACCCTCGCCAGGGCGCTACTAGCAAGTACCTGATTGGATGGAAAAAACCCGAAGGAACCA TAAACTCCGTGGGATTTATGGACACGAGAAAGCGTCATCAGAGCGATGGCAATGAAATAGCCCACACCAG GCTGCGTGCCTCAACCAGAGACCTCCGGGCATCTCCTAAGCCAACCTCCAAGTCCACCATTGAAGAAGAT CTAAAGAAACTAATTGATCTTGAAAGCCCAACTCCTGAATCACAGAAGAGTTTTAAGTTCCACGCACTCT CCTCTCCTCAGTCTCCTTTCCCCAGCACCCCCACCTCACGGCGGGCCTTGCACAGAACACTGTCGGACGA GAGCATTTACAATAGCCAGAGGGAGCACTTTTTCACCTCCAGGGCGTCACTTCTGGACCAAGCCCTGCCC AACGACGTCCTCTTCAGTAGCACGTACCCTTCTCTCCCCAAGTCGCTCCCGTTGAGGAGGCCTTCTTACA CCTTAGGAATGAAATCGCTGCATGGAGAGTTCTCAGCCTCGGACAGCTCCCTCACTGACATCCAGGAGAC CCGCAGGCAGCCTATGCCCGACCCTGGCCTGATGCCCCTGCCTGACACTGCTGCAGACTTGGATTGGTCC AACCTGGTAGATGCTGCCAAAGCCTATGAGGTCCAGAGAGCCTCATTTTTTGCTGCTAGTGATGAAAACC ATCGCCCCTTGAGTGCTGCATCCAACAGTGATCAGCTGGAGGACCAGGCTCTGGCCCAGATGAAGCCTTA CAGCAGCAGTAAAGACTCCTCTCCCACTCTGGCTTCTAAAGTGGACCAGCTGGAAGGTATGCTGAAGATG CTTCGGGAAGATTTGAAGAAGGAAAAAGAAGACAAAGCTCACCTTCAGGCGGAGGTGCAGCACCTGCGAG AGGACAACCTGAGGCTACAGGAGGAGTCCCAGAACGCCTCGGACAAGCTGAAGAAGTTCACAGAATGGGT CTTCAACACCATAGACATGAGCTAG
Translation (1804 aa): MTSLKRSQTERPLATDRASVVGTDGTPKVHTDDFYMRRFRSQNGSLGSSVMAPVGPPRSEGSHHITSTPG VPKMGVRARIADWPPRKENIKESSRSSQEIETSSCLDSLSSKSSPVSQGSSVSLNSNDSAMLKSIQNTLK NKTRPSENMDSRFLMPEAYPSSPRKALRRIRQRSNSDITISELDVDSFDECISPTYKTGPSLHREYGSTS SIDKQGTSGESFFDLLKGYKDDKSDRGPTPTKLSDFLITGGGKGSGFSLDVIDGPISQRENLRLFKEREK PLKRRSKSETGDSSIFRKLRNAKGEELGKSSDLEDNRSEDSVRPWTCPKCFAHYDVQSILFDLNEAIMNR HNVIKRRNTTTGASAAAVASLVSGPLSHSASFSSPMGSTEDLNSKGSLSMDQGDDKSNELVMSCPYFRNE IGGEGERKISLSKSNSGSFSGCESASFESTLSSHCTNAGVAVLEVPKENLVLHLDRVKRYIVEHVDLGAY YYRKFFYQKEHWNYFGADENLGPVAVSIRREKPDEMKENGSPYNYRIIFRTSELMTLRGSVLEDAIPSTA KHSTARGLPLKEVLEHVVPELNVQCLRLAFNTPKVTEQLMKLDEQGLNYQQKVGIMYCKAGQSTEEEMYN NESAGPAFEEFLQLLGERVRLKGFEKYRAQLDTKTDSTGTHSLYTTYKDYEIMFHVSTMLPYTPNNKQQL LRKRHIGNDIVTIVFQEPGAQPFSPKNIRSHFQHVFVIVRVHNPCSDSVCYSVAVTRSRDVPSFGPPIPK GVTFPKSNVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAEKNVTNTPIDPSGKFPFISLASK KKEKSKPYPGAELSSMGAIVWAVRAEDYNKAMELDCLLGISNEFIVLIEQETKSVVFNCSCRDVIGWTST DTSLKIFYERGECVSVGSFINIEEIKEIVKRLQFVSKGCESVEMTLRRNGLGQLGFHVNYEGIVADVEPY GYAWQAGLRQGSRLVEICKVAVATLSHEQMIDLLRTSVTVKVVIIPPHDDCTPRRSCSETYRMPVMEYKM NEGVSYEFKFPFRNNNKWQRNASKGPHSPQVPSQVQSPMTSRLNAGKGDGKMPPPERAANIPRSISSDGR PLERRLSPGSDIYVTVSSMALARSQCRNSPSNLSSSSDTGSVGGTYRQKSMPEGFGVSRRSPASIDRQNT QSDIGGSGKSTPSWQRSEDSIADQMAYSYRGPQDFNSFVLEQHEYTEPTCHLPAVSKVLPAFRESPSGRL MRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNASSAHSDEKWYDGDRTESELNSYNYLQGTSADSGIDT TSYGPSHGSTASLGAATSSPRSGPGKEKVAPLWHSSSEVISMADRTLETESHGLDRKTESSLSLDIHSKS QAGSTPLTRENSTFSINDAASHTSTMSSRHSASPVVFTSARSSPKEELHPAAPSQLAPSFSSSSSSSSGP RSFYPRQGATSKYLIGWKKPEGTINSVGFMDTRKRHQSDGNEIAHTRLRASTRDLRASPKPTSKSTIEED LKKLIDLESPTPESQKSFKFHALSSPQSPFPSTPTSRRALHRTLSDESIYNSQREHFFTSRASLLDQALP NDVLFSSTYPSLPKSLPLRRPSYTLGMKSLHGEFSASDSSLTDIQETRRQPMPDPGLMPLPDTAADLDWS NLVDAAKAYEVQRASFFAASDENHRPLSAASNSDQLEDQALAQMKPYSSSKDSSPTLASKVDQLEGMLKM LREDLKKEKEDKAHLQAEVQHLREDNLRLQEESQNASDKLKKFTEWVFNTIDMS
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