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Report for CCDS9972.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9972.1 Public Homo sapiens 14 CINP 24 110 108 CCDS HistoryNCBI Gene:51550Re-query CCDS DB by CCDS ID:9972.1Re-query CCDS DB by GeneID:51550See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9972.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216756.11 ENSP00000216756.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216756.11Link to Ensembl Protein Viewer:ENSP00000216756.6Re-query CCDS DB by Nucleotide ID:ENST00000216756Re-query CCDS DB by Protein ID:ENSP00000216756
Original member Current member EBI ENST00000559514.5 ENSP00000453839.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559514.5Link to Ensembl Protein Viewer:ENSP00000453839.1Re-query CCDS DB by Nucleotide ID:ENST00000559514Re-query CCDS DB by Protein ID:ENSP00000453839
Original member Current member NCBI NM_032630.3 NP_116019.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032630.3Link to Protein Sequence:NP_116019.1Re-query CCDS DB by Nucleotide ID:NM_032630Re-query CCDS DB by Protein ID:NP_116019Link to BLAST:NP_116019.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116019.1 212 Q9BW66-1 212 100% 0 0

Chromosomal Locations for CCDS 9972.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 102348557 102348759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102349919 102350048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102355768 102355897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102359419 102359587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102362845 102362851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (639 nt):
ATGGAAGCAAAGACTCTTGGAACTGTAACGCCCAGAAAACCTGTCTTATCTGTCAGTGCAAGAAAAATTA
AGGACAATGCGGCTGATTGGCACAATTTAATCCTGAAGTGGGAAACCCTCAATGATGCAGGTTTTACCAC
TGCAAATAATATTGCCAACTTGAAAATCAGTTTATTGAATAAAGACAAGATAGAACTAGACAGCAGCAGC
CCAGCCTCGAAGGAAAATGAAGAAAAGGTGTGTCTGGAATATAACGAGGAACTGGAGAAGCTGTGTGAGG
AACTGCAGGCCACCTTGGATGGGTTGACCAAAATACAGGTGAAAATGGAAAAGCTGTCTTCAACTACCAA
GGGAATTTGTGAACTAGAAAACTACCATTATGGGGAGGAGAGTAAACGACCCCCTCTGTTCCACACGTGG
CCTACAACCCATTTCTATGAGGTTTCGCATAAGCTCTTGGAGATGTACAGGAAGGAGCTGCTCCTGAAGC
GCACGGTGGCCAAGGAGCTTGCCCACACCGGGGATCCCGACCTCACCCTGAGCTACCTGTCCATGTGGCT
GCACCAGCCCTATGTGGAGAGCGACAGCAGGCTGCATCTGGAGAGCATGCTGCTGGAGACAGGCCACCGA
GCTCTCTGA

Translation (212 aa):
MEAKTLGTVTPRKPVLSVSARKIKDNAADWHNLILKWETLNDAGFTTANNIANLKISLLNKDKIELDSSS
PASKENEEKVCLEYNEELEKLCEELQATLDGLTKIQVKMEKLSSTTKGICELENYHYGEESKRPPLFHTW
PTTHFYEVSHKLLEMYRKELLLKRTVAKELAHTGDPDLTLSYLSMWLHQPYVESDSRLHLESMLLETGHR
AL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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