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Report for CCDS999.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
999.1 Public Homo sapiens 1 CGN 24 110 108 CCDS HistoryNCBI Gene:57530Re-query CCDS DB by CCDS ID:999.1Re-query CCDS DB by GeneID:57530See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 999.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000271636.12 ENSP00000271636.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000271636.12Link to Ensembl Protein Viewer:ENSP00000271636.7Re-query CCDS DB by Nucleotide ID:ENST00000271636Re-query CCDS DB by Protein ID:ENSP00000271636
Original member Current member NCBI NM_020770.3 NP_065821.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020770.3Link to Protein Sequence:NP_065821.1Re-query CCDS DB by Nucleotide ID:NM_020770Re-query CCDS DB by Protein ID:NP_065821Link to BLAST:NP_065821.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065821.1 1203 Q9P2M7-1 1203 100% 0 0

Chromosomal Locations for CCDS 999.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151518520 151519392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151520166 151520266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151520414 151520483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151520596 151520691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151523434 151523561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151524226 151524358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151524674 151524886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151525642 151525790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151526975 151527107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151529350 151529559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151529909 151530115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151530489 151530746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151532402 151532572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151533975 151534136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151535042 151535131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151535600 151535683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151535780 151535898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151536237 151536345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151536730 151536893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151537205 151537346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3612 nt):
ATGGAGCAGGCACCCAACATGGCTGAGCCCCGGGGCCCCGTAGACCATGGAGTCCAGATTCGCTTCATCA
CAGAGCCAGTGAGTGGTGCAGAGATGGGCACTCTACGTCGAGGTGGACGACGCCCAGCTAAGGATGCAAG
AGCCAGTACCTACGGGGTTGCTGTGCGTGTGCAGGGAATCGCTGGGCAGCCCTTTGTGGTGCTCAACAGT
GGGGAGAAAGGCGGTGACTCCTTTGGGGTCCAAATCAAGGGGGCCAATGACCAAGGGGCCTCAGGAGCTC
TGAGCTCAGATTTGGAACTCCCTGAGAACCCCTACTCTCAGGTCAAGGGATTTCCTGCCCCCTCGCAGAG
CAGCACATCTGATGAGGAGCCTGGGGCCTACTGGAATGGAAAGCTACTCCGTTCCCACTCCCAGGCCTCA
CTGGCAGGCCCTGGCCCAGTGGATCCTAGTAACAGAAGCAACAGCATGCTGGAGCTAGCCCCGAAAGTGG
CTTCCCCAGGTAGCACCATTGACACTGCTCCCCTGTCTTCAGTGGACTCACTCATCAACAAGTTTGACAG
TCAACTTGGAGGCCAGGCCCGGGGTCGGACTGGCCGCCGAACACGGATGCTACCCCCTGAACAGCGCAAA
CGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGACACCTTTGAGGAACGGGAGCGCCAGTCCACCAACC
ACTGGACCTCTAGCACAAAATATGACAACCATGTGGGCACTTCGAAGCAGCCAGCCCAGAGCCAGAACCT
GAGTCCTCTCAGTGGCTTTAGCCGTTCTCGTCAGACTCAGGACTGGGTCCTTCAGAGTTTTGAGGAGCCG
CGGAGGAGTGCACAGGACCCCACCATGCTGCAGTTCAAATCAACTCCAGACCTCCTTCGAGACCAGCAGG
AGGCAGCCCCACCAGGCAGTGTGGACCATATGAAGGCCACCATCTATGGCATCCTGAGGGAGGGAAGCTC
AGAAAGTGAAACCTCTGTGAGGAGGAAGGTTAGTTTGGTGCTGGAGAAGATGCAGCCTCTAGTGATGGTT
TCTTCTGGTTCTACTAAGGCCGTGGCAGGGCAGGGTGAGCTTACCCGAAAAGTGGAGGAGCTACAGCGAA
AGCTGGATGAAGAGGTGAAGAAGCGGCAGAAGCTAGAGCCATCCCAAGTTGGGCTGGAGCGGCAGCTGGA
GGAGAAAACAGAAGAGTGCAGCCGACTGCAGGAGCTGCTGGAGAGGAGGAAGGGGGAGGCCCAGCAGAGC
AACAAGGAGCTCCAGAACATGAAGCGCCTCTTGGACCAGGGTGAAGATTTACGACATGGGCTGGAGACCC
AGGTGATGGAGCTGCAGAACAAGCTGAAACATGTCCAGGGTCCTGAGCCTGCTAAGGAGGTGTTACTGAA
GGACCTGTTAGAGACCCGGGAACTTCTGGAAGAGGTCTTGGAGGGGAAACAGCGAGTAGAGGAGCAGCTG
AGGCTGCGGGAGCGGGAGTTGACAGCCCTGAAGGGGGCCCTGAAAGAGGAGGTAGCCTCCCGTGACCAGG
AGGTGGAACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGATGCAAC
CCAGGACCATGCAGTGCTGGAGGCCGAGAGGCAGAAGATGTCAGCCCTTGTGCGAGGGCTGCAGAGGGAG
CTGGAGGAGACTTCAGAGGAGACAGGGCATTGGCAGAGTATGTTCCAGAAGAACAAGGAGGATCTTAGAG
CCACCAAGCAGGAACTCCTGCAGCTGCGAATGGAGAAGGAGGAGATGGAAGAGGAGCTTGGAGAGAAGAT
AGAGGTCTTGCAGAGGGAATTAGAGCAGGCCCGAGCTAGTGCTGGAGATACTCGCCAGGTTGAGGTGCTC
AAGAAGGAGCTGCTCCGGACACAGGAGGAGCTTAAGGAACTGCAGGCAGAACGGCAGAGCCAGGAGGTGG
CTGGGCGACACCGGGACCGGGAGTTGGAGAAGCAGCTGGCGGTCCTGAGGGTCGAGGCTGATCGAGGTCG
GGAGCTGGAAGAACAGAACCTCCAGCTACAAAAGACCCTCCAGCAACTGCGACAGGACTGTGAAGAGGCT
TCCAAGGCTAAGATGGTGGCCGAGGCAGAGGCAACAGTGCTGGGGCAGCGGCGGGCCGCAGTGGAGACGA
CGCTTCGGGAGACCCAGGAGGAAAATGACGAATTCCGCCGGCGCATCCTGGGTTTGGAGCAGCAGCTGAA
GGAGACTCGAGGTCTGGTGGATGGTGGGGAAGCGGTGGAGGCACGACTACGGGACAAGCTGCAGCGGCTG
GAGGCAGAGAAACAGCAGCTGGAGGAGGCCCTGAATGCGTCCCAGGAAGAGGAGGGGAGTCTGGCAGCAG
CCAAGCGGGCACTGGAGGCACGCCTAGAGGAGGCTCAGCGGGGGCTGGCCCGCCTGGGGCAGGAGCAGCA
GACACTGAACCGGGCCCTGGAGGAGGAAGGGAAGCAGCGGGAGGTGCTCCGGCGAGGCAAGGCTGAGCTG
GAGGAGCAGAAGCGTTTGCTGGACAGGACTGTGGACCGACTGAACAAGGAGTTGGAGAAGATCGGGGAGG
ACTCTAAGCAAGCCCTGCAGCAGCTCCAGGCCCAGCTGGAGGATTATAAGGAAAAGGCCCGGCGGGAGGT
GGCAGATGCCCAGCGCCAGGCCAAGGATTGGGCCAGTGAGGCTGAGAAGACCTCTGGAGGACTGAGCCGA
CTTCAGGATGAGATCCAGAGGCTGCGGCAGGCCCTGCAGGCATCCCAGGCTGAGCGGGACACAGCCCGGC
TGGACAAAGAGCTACTGGCCCAGCGACTGCAGGGGCTGGAGCAAGAGGCAGAGAACAAGAAGCGTTCCCA
GGACGACAGGGCCCGGCAGCTGAAGGGTCTCGAGGAAAAAGTCTCACGGCTGGAAACAGAGTTAGATGAG
GAGAAGAACACCGTGGAGCTGCTAACAGATCGGGTGAATCGTGGCCGGGACCAGGTGGATCAGCTGAGGA
CAGAGCTCATGCAGGAAAGGTCTGCTCGGCAGGACCTGGAGTGTGACAAAATCTCCTTGGAGAGACAGAA
CAAGGACCTGAAGACCCGGTTGGCCAGCTCAGAAGGCTTCCAGAAGCCTAGTGCCAGCCTCTCTCAGCTT
GAGTCCCAGAATCAGTTGTTGCAGGAGCGGCTACAGGCTGAAGAGAGGGAGAAGACAGTTCTGCAGTCTA
CCAATCGAAAACTGGAGCGGAAAGTTAAAGAACTATCCATCCAGATTGAAGACGAGCGGCAGCATGTCAA
TGACCAGAAAGACCAGCTAAGCCTGAGGGTGAAGGCTTTGAAGCGTCAGGTGGATGAAGCAGAAGAGGAA
ATTGAGCGACTGGACGGCCTGAGGAAGAAGGCCCAGCGTGAGGTGGAGGAGCAGCATGAGGTCAATGAAC
AGCTCCAGGCCCGGATCAAGTCTCTGGAGAAGGACTCCTGGCGCAAAGCTTCCCGCTCAGCTGCTGAGTC
AGCTCTCAAAAACGAAGGGCTGAGCTCAGATGAGGAATTCGACAGTGTCTACGATCCCTCGTCCATTGCA
TCACTGCTTACGGAGAGCAACCTACAGACCAGCTCCTGTTAG

Translation (1203 aa):
MEQAPNMAEPRGPVDHGVQIRFITEPVSGAEMGTLRRGGRRPAKDARASTYGVAVRVQGIAGQPFVVLNS
GEKGGDSFGVQIKGANDQGASGALSSDLELPENPYSQVKGFPAPSQSSTSDEEPGAYWNGKLLRSHSQAS
LAGPGPVDPSNRSNSMLELAPKVASPGSTIDTAPLSSVDSLINKFDSQLGGQARGRTGRRTRMLPPEQRK
RSKSLDSRLPRDTFEERERQSTNHWTSSTKYDNHVGTSKQPAQSQNLSPLSGFSRSRQTQDWVLQSFEEP
RRSAQDPTMLQFKSTPDLLRDQQEAAPPGSVDHMKATIYGILREGSSESETSVRRKVSLVLEKMQPLVMV
SSGSTKAVAGQGELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQS
NKELQNMKRLLDQGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQL
RLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRE
LEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVL
KKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEA
SKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRL
EAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAEL
EEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSR
LQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDE
EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQL
ESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEE
IERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESALKNEGLSSDEEFDSVYDPSSIA
SLLTESNLQTSSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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