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Conserved domains on  [gi|47169091|pdb|1S7G|B]
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Chain B, NAD-dependent deacetylase 2

Protein Classification

NAD-dependent protein deacylase( domain architecture ID 10105457)

NAD-dependent protein deacylase such as an NAD-dependent protein deacetylase,which modulates the activities of several enzymes which are inactive in their acetylated form

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
prot_deacyl_CobB super family cl46174
NAD-dependent protein deacetylase;
6-246 6.36e-156

NAD-dependent protein deacetylase;


The actual alignment was detected with superfamily member NF040867:

Pssm-ID: 468804  Cd Length: 242  Bit Score: 432.77  E-value: 6.36e-156
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         6 RKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPAHYA 84
Cdd:NF040867   1 EKAAELLASSRHAIAFTGAGISTESGIPTFRGPDGLWRRYDPEELATIEAFERDPKLVWEFYRWRMEKLFdAKPNPAHYA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        85 IAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEI-PRCRKCGSYYvKPRVV 163
Cdd:NF040867  81 LAELERMGILKAVITQNVDGLHQRAGSRNVIELHGNMRRVRCTSCGRTYDLEEVLRKIDKGELpPRCPECGGLL-RPDVV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       164 LFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPKIV 243
Cdd:NF040867 160 LFGEPLPDDALEEAFELAERSDVVLVVGSSLTVYPAAYLPYIAKENGGKLIIINPEETPLDPIADIVLRGRAGEVLPKLV 239

                 ...
1S7G_B       244 EEV 246
Cdd:NF040867 240 EEV 242
 
Name Accession Description Interval E-value
prot_deacyl_CobB NF040867
NAD-dependent protein deacetylase;
6-246 6.36e-156

NAD-dependent protein deacetylase;


Pssm-ID: 468804  Cd Length: 242  Bit Score: 432.77  E-value: 6.36e-156
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         6 RKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPAHYA 84
Cdd:NF040867   1 EKAAELLASSRHAIAFTGAGISTESGIPTFRGPDGLWRRYDPEELATIEAFERDPKLVWEFYRWRMEKLFdAKPNPAHYA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        85 IAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEI-PRCRKCGSYYvKPRVV 163
Cdd:NF040867  81 LAELERMGILKAVITQNVDGLHQRAGSRNVIELHGNMRRVRCTSCGRTYDLEEVLRKIDKGELpPRCPECGGLL-RPDVV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       164 LFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPKIV 243
Cdd:NF040867 160 LFGEPLPDDALEEAFELAERSDVVLVVGSSLTVYPAAYLPYIAKENGGKLIIINPEETPLDPIADIVLRGRAGEVLPKLV 239

                 ...
1S7G_B       244 EEV 246
Cdd:NF040867 240 EEV 242
SIR2_Af2 cd01413
SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, ...
12-234 6.78e-141

SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The Sir2 homolog from the archaea Sulfolobus solftaricus deacetylates the non-specific DNA protein Alba to mediate transcription repression.


Pssm-ID: 238704  Cd Length: 222  Bit Score: 394.04  E-value: 6.78e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       12 LAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPAHYAIAELER 90
Cdd:cd01413   1 LTKSRKTVVLTGAGISTESGIPDFRSPDGLWKKYDPEEVASIDYFYRNPEEFWRFYKEIILGLLeAQPNKAHYFLAELEK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       91 MGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEfVEDFNKGEIPRCRKCGSYyVKPRVVLFGEPLP 170
Cdd:cd01413  81 QGIIKAIITQNIDGLHQRAGSKNVIELHGTLQTAYCVNCGSKYDLEE-VKYAKKHEVPRCPKCGGI-IRPDVVLFGEPLP 158
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
1S7G_B      171 QRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGK 234
Cdd:cd01413 159 QALLREAIEAAKEADLFIVLGSSLVVYPANLLPLIAKENGAKLVIVNADETPFDYIADLVIQDK 222
SIR2 COG0846
NAD-dependent protein deacetylase, SIR2 family [Posttranslational modification, protein ...
3-244 5.09e-136

NAD-dependent protein deacetylase, SIR2 family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440607  Cd Length: 243  Bit Score: 382.59  E-value: 5.09e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        3 DEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPA 81
Cdd:COG0846   2 TKIERLAELLREAKRIVVLTGAGISAESGIPDFRGPDGLWEKYDPEEVASPEAFRRDPELVWAFYNERRRLLRdAEPNAA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       82 HYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSyYVKPR 161
Cdd:COG0846  82 HRALAELEKAGKLVFVITQNVDGLHQRAGSKNVIELHGSLHRLRCTKCGKRYDLEDVLEDLEGELPPRCPKCGG-LLRPD 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B      162 VVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPK 241
Cdd:COG0846 161 VVWFGEMLPEEALERALEALAEADLFLVIGTSLVVYPAAGLPEYAKRAGAPLVEINPEPTPLDSLADLVIRGDAGEVLPA 240

                ...
1S7G_B      242 IVE 244
Cdd:COG0846 241 LVE 243
PRK00481 PRK00481
NAD-dependent deacetylase; Provisional
3-248 6.05e-131

NAD-dependent deacetylase; Provisional


Pssm-ID: 234777  Cd Length: 242  Bit Score: 369.51  E-value: 6.05e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         3 DEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEF-SMEMKDKLFAEPNPA 81
Cdd:PRK00481   1 MRIEELAEILDKAKRIVVLTGAGISAESGIPDFRSANGLWEEHRPEDVASPEGFARDPELVWKFyNERRRQLLDAKPNAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        82 HYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVedfnKGEIPRCRKCGSYyVKPR 161
Cdd:PRK00481  81 HRALAELEKLGKLVTVITQNIDGLHERAGSKNVIELHGSLLRARCTKCGQTYDLDEYL----KPEPPRCPKCGGI-LRPD 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       162 VVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPK 241
Cdd:PRK00481 156 VVLFGEMLPELAIDEAYEALEEADLFIVIGTSLVVYPAAGLPYEAREHGAKTVEINLEPTPLDSLFDLVIHGKAGEVVPE 235

                 ....*..
1S7G_B       242 IVEEVKR 248
Cdd:PRK00481 236 LVEELLA 242
SIR2 pfam02146
Sir2 family; This region is characteriztic of Silent information regulator 2 (Sir2) proteins, ...
23-198 8.65e-88

Sir2 family; This region is characteriztic of Silent information regulator 2 (Sir2) proteins, or sirtuins. These are protein deacetylases that depend on nicotine adenine dinucleotide (NAD). They are found in many subcellular locations, including the nucleus, cytoplasm and mitochondria. Eukaryotic forms play in important role in the regulation of transcriptional repression. Moreover, they are involved in microtubule organization and DNA damage repair processes.i


Pssm-ID: 426621  Cd Length: 179  Bit Score: 257.95  E-value: 8.65e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         23 GAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWE---FSMEMKDKLF--AEPNPAHYAIAELERMGIVKAV 97
Cdd:pfam02146   1 GAGISTESGIPDFRSDDGLYAKLAPEELASPEAFFSNPELVWDpepFYNIARELLPgeAQPNPAHYFIAKLEDKGKLLRL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         98 ITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSyYVKPRVVLFGEPLPqRTLFEA 177
Cdd:pfam02146  81 ITQNIDGLHERAGSKKVVELHGSFAKARCVSCHQKYTGETLYERIRPEKVPHCPQCGG-LLKPDIVFFGENLP-DKFHRA 158
                         170       180
                  ....*....|....*....|.
1S7G_B        178 IEEAKHCDAFMVVGSSLVVYP 198
Cdd:pfam02146 159 YEDLEEADLLIVIGTSLKVYP 179
 
Name Accession Description Interval E-value
prot_deacyl_CobB NF040867
NAD-dependent protein deacetylase;
6-246 6.36e-156

NAD-dependent protein deacetylase;


Pssm-ID: 468804  Cd Length: 242  Bit Score: 432.77  E-value: 6.36e-156
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         6 RKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPAHYA 84
Cdd:NF040867   1 EKAAELLASSRHAIAFTGAGISTESGIPTFRGPDGLWRRYDPEELATIEAFERDPKLVWEFYRWRMEKLFdAKPNPAHYA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        85 IAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEI-PRCRKCGSYYvKPRVV 163
Cdd:NF040867  81 LAELERMGILKAVITQNVDGLHQRAGSRNVIELHGNMRRVRCTSCGRTYDLEEVLRKIDKGELpPRCPECGGLL-RPDVV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       164 LFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPKIV 243
Cdd:NF040867 160 LFGEPLPDDALEEAFELAERSDVVLVVGSSLTVYPAAYLPYIAKENGGKLIIINPEETPLDPIADIVLRGRAGEVLPKLV 239

                 ...
1S7G_B       244 EEV 246
Cdd:NF040867 240 EEV 242
SIR2_Af2 cd01413
SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, ...
12-234 6.78e-141

SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The Sir2 homolog from the archaea Sulfolobus solftaricus deacetylates the non-specific DNA protein Alba to mediate transcription repression.


Pssm-ID: 238704  Cd Length: 222  Bit Score: 394.04  E-value: 6.78e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       12 LAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPAHYAIAELER 90
Cdd:cd01413   1 LTKSRKTVVLTGAGISTESGIPDFRSPDGLWKKYDPEEVASIDYFYRNPEEFWRFYKEIILGLLeAQPNKAHYFLAELEK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       91 MGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEfVEDFNKGEIPRCRKCGSYyVKPRVVLFGEPLP 170
Cdd:cd01413  81 QGIIKAIITQNIDGLHQRAGSKNVIELHGTLQTAYCVNCGSKYDLEE-VKYAKKHEVPRCPKCGGI-IRPDVVLFGEPLP 158
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
1S7G_B      171 QRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGK 234
Cdd:cd01413 159 QALLREAIEAAKEADLFIVLGSSLVVYPANLLPLIAKENGAKLVIVNADETPFDYIADLVIQDK 222
SIR2 COG0846
NAD-dependent protein deacetylase, SIR2 family [Posttranslational modification, protein ...
3-244 5.09e-136

NAD-dependent protein deacetylase, SIR2 family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440607  Cd Length: 243  Bit Score: 382.59  E-value: 5.09e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        3 DEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPA 81
Cdd:COG0846   2 TKIERLAELLREAKRIVVLTGAGISAESGIPDFRGPDGLWEKYDPEEVASPEAFRRDPELVWAFYNERRRLLRdAEPNAA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       82 HYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSyYVKPR 161
Cdd:COG0846  82 HRALAELEKAGKLVFVITQNVDGLHQRAGSKNVIELHGSLHRLRCTKCGKRYDLEDVLEDLEGELPPRCPKCGG-LLRPD 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B      162 VVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPK 241
Cdd:COG0846 161 VVWFGEMLPEEALERALEALAEADLFLVIGTSLVVYPAAGLPEYAKRAGAPLVEINPEPTPLDSLADLVIRGDAGEVLPA 240

                ...
1S7G_B      242 IVE 244
Cdd:COG0846 241 LVE 243
PRK00481 PRK00481
NAD-dependent deacetylase; Provisional
3-248 6.05e-131

NAD-dependent deacetylase; Provisional


Pssm-ID: 234777  Cd Length: 242  Bit Score: 369.51  E-value: 6.05e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         3 DEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEF-SMEMKDKLFAEPNPA 81
Cdd:PRK00481   1 MRIEELAEILDKAKRIVVLTGAGISAESGIPDFRSANGLWEEHRPEDVASPEGFARDPELVWKFyNERRRQLLDAKPNAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        82 HYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVedfnKGEIPRCRKCGSYyVKPR 161
Cdd:PRK00481  81 HRALAELEKLGKLVTVITQNIDGLHERAGSKNVIELHGSLLRARCTKCGQTYDLDEYL----KPEPPRCPKCGGI-LRPD 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       162 VVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPK 241
Cdd:PRK00481 156 VVLFGEMLPELAIDEAYEALEEADLFIVIGTSLVVYPAAGLPYEAREHGAKTVEINLEPTPLDSLFDLVIHGKAGEVVPE 235

                 ....*..
1S7G_B       242 IVEEVKR 248
Cdd:PRK00481 236 LVEELLA 242
SIR2-fam cd01407
SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze ...
16-234 1.54e-124

SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose. Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer.


Pssm-ID: 238698  Cd Length: 218  Bit Score: 352.64  E-value: 1.54e-124
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       16 KHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVA-SISGFKRNPRAFWEFSMEMKDKLFAEPNPAHYAIAELERMGIV 94
Cdd:cd01407   1 KRIVVLTGAGISTESGIPDFRSPGGLWARLDPEELAfSPEAFRRDPELFWGFYRERRYPLNAQPNPAHRALAELERKGKL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       95 KAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSyYVKPRVVLFGEPLPQRtL 174
Cdd:cd01407  81 KRVITQNVDGLHQRAGSPKVIELHGSLFRVRCTKCGKEYPRDELQADIDREEVPRCPKCGG-LLRPDVVFFGESLPEE-L 158
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B      175 FEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGK 234
Cdd:cd01407 159 DEAAEALAKADLLLVIGTSLQVYPAAGLPLYAPERGAPVVIINLEPTPADRKADLVILGD 218
SIRT5_Af1_CobB cd01412
SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human ...
16-243 1.30e-104

SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity.


Pssm-ID: 238703  Cd Length: 224  Bit Score: 302.20  E-value: 1.30e-104
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       16 KHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEF-SMEMKDKLFAEPNPAHYAIAELERMGIV 94
Cdd:cd01412   1 RRVVVLTGAGISAESGIPTFRDADGLWARFDPEELATPEAFARDPELVWEFyNWRRRKALRAQPNPAHLALAELERRLPN 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       95 KAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWsefVEDFNKGEIPRCRKCGSyYVKPRVVLFGEPLPQrTL 174
Cdd:cd01412  81 VLLITQNVDGLHERAGSRNVIELHGSLFRVRCSSCGYVGEN---NEEIPEEELPRCPKCGG-LLRPGVVWFGESLPL-AL 155
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
1S7G_B      175 FEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPKIV 243
Cdd:cd01412 156 LEAVEALAKADLFLVIGTSGVVYPAAGLPEEAKERGARVIEINPEPTPLSPIADFAFRGKAGEVLPALL 224
SIR2 cd00296
SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which ...
16-234 4.03e-99

SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose. Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer. Also included in this superfamily is a group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines.


Pssm-ID: 238184 [Multi-domain]  Cd Length: 222  Bit Score: 288.47  E-value: 4.03e-99
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       16 KHAVVFTGAGISAESGIPTFRGED-GLWRKYDPEEVA-SISGFKRNPRAFWEFSMEMKDKLF-AEPNPAHYAIAELERMG 92
Cdd:cd00296   1 KRVVVFTGAGISTESGIPDFRGLGtGLWTRLDPEELAfSPEAFRRDPELFWLFYKERRYTPLdAKPNPAHRALAELERKG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       93 IVKAVITQNIDMLHQRAGSR--RVLELHGSMDKLDCLDCHETYDWSEFVEDFnkgEIPRCRKCGSYyVKPRVVLFGEPLP 170
Cdd:cd00296  81 KLKRIITQNVDGLHERAGSRrnRVIELHGSLDRVRCTSCGKEYPRDEVLERE---KPPRCPKCGGL-LRPDVVDFGEALP 156
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
1S7G_B      171 QRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMAD--PIFDVKIIGK 234
Cdd:cd00296 157 KEWFDRALEALLEADLVLVIGTSLTVYPAARLLLRAPERGAPVVIINREPTPADalKKADLVILGD 222
SIR2 pfam02146
Sir2 family; This region is characteriztic of Silent information regulator 2 (Sir2) proteins, ...
23-198 8.65e-88

Sir2 family; This region is characteriztic of Silent information regulator 2 (Sir2) proteins, or sirtuins. These are protein deacetylases that depend on nicotine adenine dinucleotide (NAD). They are found in many subcellular locations, including the nucleus, cytoplasm and mitochondria. Eukaryotic forms play in important role in the regulation of transcriptional repression. Moreover, they are involved in microtubule organization and DNA damage repair processes.i


Pssm-ID: 426621  Cd Length: 179  Bit Score: 257.95  E-value: 8.65e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         23 GAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWE---FSMEMKDKLF--AEPNPAHYAIAELERMGIVKAV 97
Cdd:pfam02146   1 GAGISTESGIPDFRSDDGLYAKLAPEELASPEAFFSNPELVWDpepFYNIARELLPgeAQPNPAHYFIAKLEDKGKLLRL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         98 ITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSyYVKPRVVLFGEPLPqRTLFEA 177
Cdd:pfam02146  81 ITQNIDGLHERAGSKKVVELHGSFAKARCVSCHQKYTGETLYERIRPEKVPHCPQCGG-LLKPDIVFFGENLP-DKFHRA 158
                         170       180
                  ....*....|....*....|.
1S7G_B        178 IEEAKHCDAFMVVGSSLVVYP 198
Cdd:pfam02146 159 YEDLEEADLLIVIGTSLKVYP 179
PRK14138 PRK14138
NAD-dependent deacetylase; Provisional
10-231 1.34e-73

NAD-dependent deacetylase; Provisional


Pssm-ID: 172627 [Multi-domain]  Cd Length: 244  Bit Score: 224.32  E-value: 1.34e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        10 EILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYdPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPAHYAIAEL 88
Cdd:PRK14138   6 ELLNESRLTVTLTGAGISTPSGIPDFRGPQGIYKKY-PQNVFDIDFFYSHPEEFYRFAKEGIFPMLeAKPNLAHVLLAKL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        89 ERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSyYVKPRVVLFGEP 168
Cdd:PRK14138  85 EEKGLIEAVITQNIDRLHQKAGSKKVIELHGNVEEYYCVRCGKRYTVEDVIEKLEKSDVPRCDDCSG-LIRPNIVFFGEA 163
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
1S7G_B       169 LPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKI 231
Cdd:PRK14138 164 LPQDALREAIRLSSKASLMIVMGSSLVVYPAAELPLITVRSGGKLVIVNLGETPLDDIATLKY 226
SIRT7 cd01410
SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, ...
16-234 5.25e-70

SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.


Pssm-ID: 238701  Cd Length: 206  Bit Score: 213.70  E-value: 5.25e-70
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       16 KHAVVFTGAGISAESGIPTFRGEDGLWRKyDPEEvasisgfKRNPRAFWEFSmemkdklFAEPNPAHYAIAELERMGIVK 95
Cdd:cd01410   1 KHLVVFTGAGISTSAGIPDFRGPNGVWTL-LPED-------KGRRRFSWRFR-------RAEPTLTHMALVELERAGLLK 65
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       96 AVITQNIDMLHQRAGSRR--VLELHGSMDKLDCLDCHETYD-WSEFVEDFNKGEIPRCRKCGSYyVKPRVVLFGEPLPQR 172
Cdd:cd01410  66 FVISQNVDGLHLRSGLPRekLSELHGNMFIEVCKSCGPEYVrDDVVETRGDKETGRRCHACGGI-LKDTIVDFGERLPPE 144
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
1S7G_B      173 TLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGK 234
Cdd:cd01410 145 NWMGAAAAACRADLFLCLGTSLQVTPAANLPLKAARAGGRLVIVNLQPTPKDKLADLVIHGD 206
SIR2H cd01411
SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species ...
10-239 1.38e-68

SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.


Pssm-ID: 238702  Cd Length: 225  Bit Score: 211.07  E-value: 1.38e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       10 EILAKSKHAVVFTGAGISAESGIPTFRGEDGLW---RKYDPEEVASISGFKRNPRAFWEFsmeMKDKLF---AEPNPAHY 83
Cdd:cd01411   3 HILKNAKRIVFFTGAGVSTASGIPDYRSKNGLYneiYKYSPEYLLSHDFLEREPEKFYQF---VKENLYfpdAKPNIIHQ 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       84 AIAELERMGIvKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDfnkgeiPRCRKCGSyYVKPRVV 163
Cdd:cd01411  80 KMAELEKMGL-KAVITQNIDGLHQKAGSKNVVEFHGSLYRIYCTVCGKTVDWEEYLKS------PYHAKCGG-VIRPDIV 151
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
1S7G_B      164 LFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELpyIA-KKAGAKMIIVNAEPTMADPIFDVkIIGKAGEVL 239
Cdd:cd01411 152 LYEEMLNESVIEEAIQAIEKADLLVIVGTSFVVYPFAGL--IDyRQAGANLIAINKEPTQLDSPATL-VIKDAVKVF 225
SIRT4 cd01409
SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and ...
12-239 1.51e-65

SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.


Pssm-ID: 238700  Cd Length: 260  Bit Score: 204.45  E-value: 1.51e-65
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       12 LAKSKHAVVFTGAGISAESGIPTFRGEDGLW-RKYDPeevASISGFKRNPRA---FWEFSM----EMKDklfAEPNPAHY 83
Cdd:cd01409   5 VARSRRLLVLTGAGISTESGIPDYRSEGGLYsRTFRP---MTHQEFMRSPAArqrYWARSFvgwpRFSA---AQPNAAHR 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       84 AIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEF------------------------- 138
Cdd:cd01409  79 ALAALEAAGRLHGLITQNVDGLHTKAGSRNVVELHGSLHRVVCLSCGFRTPRAELqdrlealnpgfaeqaagqapdgdvd 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B      139 --VEDFNKGEIPRCRKCGSYyVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIV 216
Cdd:cd01409 159 leDEQVAGFRVPECERCGGV-LKPDVVFFGENVPRDRVVTAAARLAEADALLVLGSSLMVYSGYRFVLAAAEAGLPIAIV 237
                       250       260
                ....*....|....*....|...
1S7G_B      217 NAEPTMADPIFDVKIIGKAGEVL 239
Cdd:cd01409 238 NIGPTRADHLATLKVDARCGEVL 260
PTZ00409 PTZ00409
Sir2 (Silent Information Regulator) protein; Provisional
9-253 2.78e-64

Sir2 (Silent Information Regulator) protein; Provisional


Pssm-ID: 173599 [Multi-domain]  Cd Length: 271  Bit Score: 201.69  E-value: 2.78e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B         9 AEILAKSKHAVVFTGAGISAESGIPTFRGE-DGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLFAEPNPAHYAIAE 87
Cdd:PTZ00409  22 ADMIRKCKYVVALTGSGTSAESNIPSFRGPsSSIWSKYDPKIYGTIWGFWKYPEKIWEVIRDISSDYEIELNPGHVALST 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        88 LERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFV----EDFNKGEIPRCrKCGSYYvKPRVV 163
Cdd:PTZ00409 102 LESLGYLKFVVTQNVDGLHEESGNTKVIPLHGSVFEARCCTCRKTIQLNKIMlqktSHFMHQLPPEC-PCGGIF-KPNVI 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       164 LFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPT-MADPIFDVKIIGKAGEvLPKI 242
Cdd:PTZ00409 180 LFGEVIPKSLLKQAEKEIDKCDLLLVVGTSSSVSTATNLCYRAHRKKKKIVEVNISKTyITNRISDYHVRAKFSE-LAQI 258
                        250
                 ....*....|.
1S7G_B       243 VEEVKRlRSEK 253
Cdd:PTZ00409 259 SDILKG-RSEK 268
PTZ00408 PTZ00408
NAD-dependent deacetylase; Provisional
19-251 1.30e-62

NAD-dependent deacetylase; Provisional


Pssm-ID: 240405  Cd Length: 242  Bit Score: 196.20  E-value: 1.30e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        19 VVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLFA---EPNPAHYAIAELER--MGI 93
Cdd:PTZ00408   8 TILTGAGISAESGISTFRDGNGLWENHRVEDVATPDAFLRNPALVQRFYNERRRALLSssvKPNKAHFALAKLEReyRGG 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        94 VKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDfnkgEIPRCRKCGSY-YVKPRVVLFGE-PLPQ 171
Cdd:PTZ00408  88 KVVVVTQNVDNLHERAGSTHVLHMHGELLKVRCTATGHVFDWTEDVVH----GSSRCKCCGCVgTLRPHIVWFGEmPLYM 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       172 RTLFEAIEEAkhcDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPKIVEEVKRLRS 251
Cdd:PTZ00408 164 DEIESVMSKT---DLFVAVGTSGNVYPAAGFVGRAQFYGATTLELNLEEGTNYSQFDESIYGKASVIVPAWVDRVLKLSN 240
SIRT1 cd01408
SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and ...
16-233 3.67e-53

SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity.


Pssm-ID: 238699  Cd Length: 235  Bit Score: 172.05  E-value: 3.67e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       16 KHAVVFTGAGISAESGIPTFRGED-GLW---RKY---DPEEVASISGFKRNPRAFWEFSMEMKDKLFaEPNPAHYAIAEL 88
Cdd:cd01408   1 KKIVVLVGAGISTSAGIPDFRSPGtGLYanlARYnlpYPEAMFDISYFRKNPRPFYALAKELYPGQF-KPSVAHYFIKLL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       89 ERMGIVKAVITQNIDMLHQRAG--SRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSYyVKPRVVLFG 166
Cdd:cd01408  80 EDKGLLLRNYTQNIDTLERVAGvpDDRIIEAHGSFATAHCIKCKHKYPGDWMREDIFNQEVPKCPRCGGL-VKPDIVFFG 158
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B      167 EPLPQRtLFEAIEEAKH-CDAFMVVGSSLVVYPAAELPYIAkKAGAKMIIVNAEPT--MADPIFDVKIIG 233
Cdd:cd01408 159 ESLPSR-FFSHMEEDKEeADLLIVIGTSLKVAPFASLPSRV-PSEVPRVLINREPVghLGKRPFDVALLG 226
PRK05333 PRK05333
NAD-dependent protein deacetylase;
19-244 6.10e-50

NAD-dependent protein deacetylase;


Pssm-ID: 235415  Cd Length: 285  Bit Score: 165.24  E-value: 6.10e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        19 VVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMeMKDKLF--AEPNPAHYAIAELERMGIVKA 96
Cdd:PRK05333  23 FVLTGAGISTDSGIPDYRDRNGQWKRSPPITYQAFMGSDAARRRYWARSM-VGWPVFgrAQPNAAHHALARLGAAGRIER 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        97 VITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVE---------------------------DFNKGEIPR 149
Cdd:PRK05333 102 LVTQNVDGLHQRAGSRDVIELHGRLDGVRCMGCGARHPRAEIQHvleaanpewlaleaapapdgdadlewaAFDHFRVPA 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       150 CRKCGSYyVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDV 229
Cdd:PRK05333 182 CPACGGI-LKPDVVFFGENVPRERVAAARAALDAADAVLVVGSSLMVYSGYRFCVWAAQQGKPIAALNLGRTRADPLLTL 260
                        250
                 ....*....|....*
1S7G_B       230 KIIGKAGEVLPKIVE 244
Cdd:PRK05333 261 KVEASCAQALAALVA 275
PTZ00410 PTZ00410
NAD-dependent SIR2; Provisional
20-208 2.86e-28

NAD-dependent SIR2; Provisional


Pssm-ID: 185600  Cd Length: 349  Bit Score: 109.96  E-value: 2.86e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        20 VFTGAGISAESGIPTFRGED-GLWRKY------DPEEVASISGFKRNPRAFWEFSMEMKdkLFA---EPNPAHYAIAELE 89
Cdd:PTZ00410  34 VMVGAGISVAAGIPDFRSPHtGIYAKLgkynlnSPTDAFSLTLLREKPEVFYSIAREMD--LWPghfQPTAVHHFIRLLA 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B        90 RMGIVKAVITQNIDMLHQRAG--SRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSyYVKPRVVLFGE 167
Cdd:PTZ00410 112 DEGRLLRCCTQNIDGLERAAGvpPSLLVEAHGSFSAASCIECHTPYDIEQAYLEARSGKVPHCSTCGG-IVKPDVVFFGE 190
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
1S7G_B       168 PLPQrTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKK 208
Cdd:PTZ00410 191 NLPD-AFFNVHHDIPEAELLLIIGTSLQVHPFALLACVVPK 230
SIR2-like cd01406
Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key ...
16-123 6.53e-04

Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.


Pssm-ID: 238697 [Multi-domain]  Cd Length: 242  Bit Score: 40.08  E-value: 6.53e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1S7G_B       16 KHAVVFTGAGISAESGIPTFRG------------EDGLWR-KYDPEEVASISG--FKRNPRAFW-----EFSMEMKDKlf 75
Cdd:cd01406   1 GRVVIFVGAGVSVSSGLPDWKTlldeiaselgleIDGYSVeAKDENDYLELAEllEKEFGTIGIkinavLEEKTRPDF-- 78
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
1S7G_B       76 aEPNPAHYAIAEL-----------------------ERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDK 123
Cdd:cd01406  79 -EPSPLHELLLRLfinnegdviiittnydrlletalKEINKVVKVIVSVQLALSASARFNGVYKIHGDVDD 148
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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