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Conserved domains on  [gi|196049780|pdb|3CWB|F]
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Chain F, MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE 14 KDA PROTEIN

Protein Classification

cytochrome b-c1 complex subunit 7( domain architecture ID 10491599)

cytochrome b-c1 complex subunit 7 is the 14kD subunit of the ubiquinol-cytochrome c oxidoreductase (b-c1 complex) which is part of the respiratory electron transport chain; similar to Saccharomyces cerevisiae Qcr7p

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 11-105 6.22e-48

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


:

Pssm-ID: 460519  Cd Length: 100  Bit Score: 148.43  E-value: 6.22e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CWB_F         11 RLMDRIRKWYYNAAGFNKYGLMRDDTLYE-DDDVKEALKRLPKDLYNERMFRIKRALDLSLKHRILPKEQWVKYEEDKPY 89
Cdd:pfam02271   5 KLLKPIAKWYANAAGYRKLGLRYDDLLIEeNPDVQEALRRLPPKESYDRVFRIRRALQLSLKHKLLPKEQWTKPEEDVPY 84

                          90
                  ....*....|....*.
3CWB_F         90 LEPYLKEVIRERLERE 105
Cdd:pfam02271  85 LTPYIDEVEKEAKERE 100
 
Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 11-105 6.22e-48

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


Pssm-ID: 460519  Cd Length: 100  Bit Score: 148.43  E-value: 6.22e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CWB_F         11 RLMDRIRKWYYNAAGFNKYGLMRDDTLYE-DDDVKEALKRLPKDLYNERMFRIKRALDLSLKHRILPKEQWVKYEEDKPY 89
Cdd:pfam02271   5 KLLKPIAKWYANAAGYRKLGLRYDDLLIEeNPDVQEALRRLPPKESYDRVFRIRRALQLSLKHKLLPKEQWTKPEEDVPY 84

                          90
                  ....*....|....*.
3CWB_F         90 LEPYLKEVIRERLERE 105
Cdd:pfam02271  85 LTPYIDEVEKEAKERE 100
 
Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 11-105 6.22e-48

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


Pssm-ID: 460519  Cd Length: 100  Bit Score: 148.43  E-value: 6.22e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CWB_F         11 RLMDRIRKWYYNAAGFNKYGLMRDDTLYE-DDDVKEALKRLPKDLYNERMFRIKRALDLSLKHRILPKEQWVKYEEDKPY 89
Cdd:pfam02271   5 KLLKPIAKWYANAAGYRKLGLRYDDLLIEeNPDVQEALRRLPPKESYDRVFRIRRALQLSLKHKLLPKEQWTKPEEDVPY 84

                          90
                  ....*....|....*.
3CWB_F         90 LEPYLKEVIRERLERE 105
Cdd:pfam02271  85 LTPYIDEVEKEAKERE 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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