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Conserved domains on  [gi|228312429|pdb|3H1H|T]
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Chain T, UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C

Protein Classification

cytochrome b-c1 complex subunit 8( domain architecture ID 10502956)

cytochrome b-c1 complex subunit 8 is a component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UcrQ pfam02939
UcrQ family; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a ...
 3-78 2.34e-40

UcrQ family; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This family represents the 9.5 kDa subunit of the complex.


:

Pssm-ID: 460757  Cd Length: 76  Bit Score: 127.24  E-value: 2.34e-40
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
3H1H_T         3 HFGNLARVRHIITYSLSPFEQRAIPNIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYE 78
Cdd:pfam02939  1 WWGNLGKQKGIITYSLSPFEQKAFAGAFSNAIFNTFRRTRSQVLYVAPPFIIGYLIYTWAKERNEYLNRKAGRDYE 76
 
Name Accession Description Interval E-value
UcrQ pfam02939
UcrQ family; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a ...
 3-78 2.34e-40

UcrQ family; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This family represents the 9.5 kDa subunit of the complex.


Pssm-ID: 460757  Cd Length: 76  Bit Score: 127.24  E-value: 2.34e-40
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
3H1H_T         3 HFGNLARVRHIITYSLSPFEQRAIPNIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYE 78
Cdd:pfam02939  1 WWGNLGKQKGIITYSLSPFEQKAFAGAFSNAIFNTFRRTRSQVLYVAPPFIIGYLIYTWAKERNEYLNRKAGRDYE 76
 
Name Accession Description Interval E-value
UcrQ pfam02939
UcrQ family; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a ...
 3-78 2.34e-40

UcrQ family; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This family represents the 9.5 kDa subunit of the complex.


Pssm-ID: 460757  Cd Length: 76  Bit Score: 127.24  E-value: 2.34e-40
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
3H1H_T         3 HFGNLARVRHIITYSLSPFEQRAIPNIFSDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNPADYE 78
Cdd:pfam02939  1 WWGNLGKQKGIITYSLSPFEQKAFAGAFSNAIFNTFRRTRSQVLYVAPPFIIGYLIYTWAKERNEYLNRKAGRDYE 76
Cyt_b-c1_8 pfam10890
Cytochrome b-c1 complex subunit 8; This entry represents subunit 8 of the Cytochrome b-c1 ...
 14-56 6.46e-03

Cytochrome b-c1 complex subunit 8; This entry represents subunit 8 of the Cytochrome b-c1 complex.


Pssm-ID: 371286  Cd Length: 72  Bit Score: 32.02  E-value: 6.46e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
3H1H_T        14 ITYSLSPFEQRAIPNIFSDALPNVWRRFSSQ---VFKVAPPFLGAY 56
Cdd:pfam10890 11 VVYTLSPYQQKVMPGLFKDWPKKIAHKFKENwvsAFLFLVPFVGTY 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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