|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
8.45e-69 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 201.71 E-value: 8.45e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 1 MNLPLALTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 24817430 81 ANILKLMLMVALVLITILAAGLAYEWLQKGLEWME 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
9.32e-47 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 146.22 E-value: 9.32e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 1 MNLPLA-LTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136 1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 24817430 80 QANILKLMLMVALVLITILAAGLAYEWLQKGLEWME 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
7.61e-46 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 143.60 E-value: 7.61e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 3 LPLALTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQAN 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 24817430 83 ILKLMLMVALVLITILAAGLAYEWLQKGLEWME 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
4.42e-43 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 136.55 E-value: 4.42e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 1 MNLPLALTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|....
gi 24817430 81 ANILKLMLMVALVLITILAAGLAYEWLQKGLEWM 114
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
2.65e-37 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 122.01 E-value: 2.65e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 1 MNLPLALTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 24817430 81 ANILKLMLMVALVLITILAAGLAYEWLQKGLEWME 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
1.38e-32 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 109.99 E-value: 1.38e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 5 LALTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANIL 84
Cdd:MTH00203 6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL 85
|
90 100
....*....|....*....|....*....
gi 24817430 85 KLMLMValVLITILAAGLAYEWLQKGLEW 113
Cdd:MTH00203 86 SLLLAF--LFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-112 |
5.22e-31 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 105.58 E-value: 5.22e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 18 VTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQANILKLM-LMVALVLIT 96
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78
|
90
....*....|....*.
gi 24817430 97 ILAAGLAYEWLQKGLE 112
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
11-115 |
1.55e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 94.92 E-value: 1.55e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 11 ITLTVLLVTIAFWLPQLNVY-TEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANILKLMLM 89
Cdd:MTH00148 12 LILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLT 91
|
90 100
....*....|....*....|....*.
gi 24817430 90 VALVLITILAAGLAYEWLQKGLEWME 115
Cdd:MTH00148 92 SLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
32-113 |
1.40e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 92.15 E-value: 1.40e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 32 EKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANILKLMLMVALVLITILAAGLAYEWLQKGL 111
Cdd:MTH00161 32 EKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQGAL 111
|
..
gi 24817430 112 EW 113
Cdd:MTH00161 112 EW 113
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
11-115 |
1.25e-24 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 90.05 E-value: 1.25e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 11 ITLTVLLVTIAFWLPQLNVYT-EKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANILKLMLM 89
Cdd:MTH00202 12 ILISSLLFLVSWMLSFRSLMDrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLL 91
|
90 100
....*....|....*....|....*.
gi 24817430 90 VALVLITILAAGLAYEWLQKGLEWME 115
Cdd:MTH00202 92 GGTIFLLILIGGLIHEWKEGSLDWVK 117
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
11-113 |
1.12e-23 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 87.48 E-value: 1.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 11 ITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQANILKLM-LM 89
Cdd:COG0838 16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFgLI 93
|
90 100
....*....|....*....|....
gi 24817430 90 VALVLITILAAGLAYEWLQKGLEW 113
Cdd:COG0838 94 EMLVFIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
31-113 |
1.02e-21 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 82.84 E-value: 1.02e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 31 TEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQANILKLM-LMVALVLITILAAGLAYEWLQK 109
Cdd:MTH00055 36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFgFWVMYLFLIILTIGLIYEWVKG 113
|
....
gi 24817430 110 GLEW 113
Cdd:MTH00055 114 GLEW 117
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
13-113 |
1.08e-20 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 79.91 E-value: 1.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 13 LTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA-SQANILKLMLMVA 91
Cdd:PRK06602 21 LGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAvSFREIGWLGFVEA 98
|
90 100
....*....|....*....|..
gi 24817430 92 LVLITILAAGLAYEWLQKGLEW 113
Cdd:PRK06602 99 MIFILVLLVGLVYLWRKGALDW 120
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
32-113 |
7.07e-20 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 77.98 E-value: 7.07e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 32 EKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANILKLMLMVALVLITILAAGLAYEWLQKGL 111
Cdd:MTH00012 34 EKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREGSL 113
|
..
gi 24817430 112 EW 113
Cdd:MTH00012 114 DW 115
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
1.50e-19 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 77.02 E-value: 1.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 1 MNLPLALTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78
|
90 100 110
....*....|....*....|....*....|....
gi 24817430 81 ANILKLM-LMVALVLITILAAGLAYEWLQKGLEW 113
Cdd:MTH00018 79 YNQIAPFgFWTMVGFLFILTLGLIYEWIKGGLEW 112
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
11-113 |
1.32e-18 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 74.97 E-value: 1.32e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 11 ITLTVLLVTIAFWLPQLNVY-----TEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQANILK 85
Cdd:MTH00030 16 VGIILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLN 93
|
90 100
....*....|....*....|....*....
gi 24817430 86 LM-LMVALVLITILAAGLAYEWLQKGLEW 113
Cdd:MTH00030 94 LFsFWIVYTFLIVLAIGLAYEWIKGGLEW 122
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
15-113 |
5.21e-13 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 60.39 E-value: 5.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 15 VLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQANILKLMLMV-ALV 93
Cdd:CHL00022 22 ILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVSAFIeALI 99
|
90 100
....*....|....*....|
gi 24817430 94 LITILAAGLAYEWLQKGLEW 113
Cdd:CHL00022 100 FVLILIVGLVYAWRKGALEW 119
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
33-113 |
4.78e-11 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 55.45 E-value: 4.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 33 KYSPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQANILKLMLMVALVL--ITILAAgLAYEWLQ 108
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfmLTVFVA-YAYVWRR 113
|
....*
gi 24817430 109 KGLEW 113
Cdd:PRK07928 114 GGLEW 118
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
7-114 |
6.54e-11 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 55.13 E-value: 6.54e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 7 LTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWASQANILKL 86
Cdd:PRK07756 16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93
|
90 100
....*....|....*....|....*....
gi 24817430 87 MLMVA-LVLITILAAGLAYEWLQKGLEWM 114
Cdd:PRK07756 94 FALIEmLIFVVMLLVGLAYAWKKKVLQWL 122
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
3-113 |
3.90e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 47.74 E-value: 3.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 3 LPLALTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWASQAN 82
Cdd:PRK08489 17 LVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFK 93
|
90 100 110
....*....|....*....|....*....|..
gi 24817430 83 ILKLMLMVALVL-ITILAAGLAYEWLQKGLEW 113
Cdd:PRK08489 94 LLGLFGLIEMLLfIVLLTIGFIYAWKKGALEW 125
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
13-114 |
7.13e-06 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 41.42 E-value: 7.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 13 LTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwasQANILKLMLMVAL 92
Cdd:MTH00092 14 LLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----LVSDFSSLISFFM 89
|
90 100
....*....|....*....|..
gi 24817430 93 VLITILaAGLAYEWLQKGLEWM 114
Cdd:MTH00092 90 LMIFIF-FGFYMEWWYGKLIWV 110
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
34-76 |
3.96e-05 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 39.88 E-value: 3.96e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 24817430 34 YSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
| PRK06073 |
PRK06073 |
NADH dehydrogenase subunit A; Validated |
5-104 |
7.58e-03 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 235690 Cd Length: 124 Bit Score: 33.81 E-value: 7.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24817430 5 LALTTNITLTVLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANIL 84
Cdd:PRK06073 12 LVIVLGLAAGVGTYKLLKLILPSKPTPLKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIAFAPYYTFR 91
|
90 100
....*....|....*....|
gi 24817430 85 KLmLMVALVLITILAAGLAY 104
Cdd:PRK06073 92 DL-LLLIVVALVLMYPVLYY 110
|
|
|