|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
6.76e-106 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 304.49 E-value: 6.76e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 1 MILTFFDQFSSPYLLGIPLIFLSMLLPPLLLPTPNNRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLL 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 81 LTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVR 160
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 161 LTANLTAGHLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
6-227 |
1.01e-45 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 151.59 E-value: 1.01e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 6 FDQFSSP--YLLGIPLIFLSMLLPPLLLPTP---NNRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLL 80
Cdd:TIGR01131 2 FSQFDISpiTLFSLTLLSLILLLSLLIFLISsslSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 81 LTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVR 160
Cdd:TIGR01131 82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 161 LTANLTAGHLLIQLISTAAITLlpIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLLFSL--MSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
90-224 |
2.67e-35 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 122.51 E-value: 2.67e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAGH 169
Cdd:cd00310 25 PYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANMFAGH 104
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 37780721 170 LLIQLISTAAITLLPImpaVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310 105 LLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
90-224 |
3.96e-31 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 113.74 E-value: 3.96e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTS-LGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAG 168
Cdd:pfam00119 81 PGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 37780721 169 HLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 161 HLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
90-225 |
6.08e-20 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 83.97 E-value: 6.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTS-LGHLLPEGTPtPLIPALILIETISLFIRPLALGVRLTANLTAG 168
Cdd:COG0356 78 PGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAG 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 169 HLLIqlistAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQE 225
Cdd:COG0356 157 HIIL-----LLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
6.76e-106 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 304.49 E-value: 6.76e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 1 MILTFFDQFSSPYLLGIPLIFLSMLLPPLLLPTPNNRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLL 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 81 LTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVR 160
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 161 LTANLTAGHLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
8.12e-105 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 301.74 E-value: 8.12e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 1 MILTFFDQFSSPYLLGIPLIFLSMLLPPLLLPTPNNRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLL 80
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 81 LTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVR 160
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 161 LTANLTAGHLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
1.42e-101 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 293.80 E-value: 1.42e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 1 MILTFFDQFSSPYLLGIPLIFLSMLLPPLLLPTPNNRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLL 80
Cdd:MTH00073 1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 81 LTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVR 160
Cdd:MTH00073 81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 161 LTANLTAGHLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00073 161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
5.55e-81 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 241.39 E-value: 5.55e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 1 MILTFFDQFSSPYLLGIPLIFLSMLLPPLLLPTPNNRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLL 80
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 81 LTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVR 160
Cdd:MTH00179 81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780721 161 LTANLTAGHLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
6-226 |
5.92e-73 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 220.98 E-value: 5.92e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 6 FDQFSSPYLLGIPLIFLSMLLPPLLLPTPNnRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLLLTINL 85
Cdd:MTH00101 6 FASFITPTILGLPIVTLIIMFPSLLFPTPN-RLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTNL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 86 LGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANL 165
Cdd:MTH00101 85 LGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANI 164
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 37780721 166 TAGHLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00101 165 TAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
6-227 |
1.01e-45 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 151.59 E-value: 1.01e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 6 FDQFSSP--YLLGIPLIFLSMLLPPLLLPTP---NNRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLL 80
Cdd:TIGR01131 2 FSQFDISpiTLFSLTLLSLILLLSLLIFLISsslSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 81 LTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVR 160
Cdd:TIGR01131 82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 161 LTANLTAGHLLIQLISTAAITLlpIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLLFSL--MSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
6-227 |
7.02e-45 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 149.35 E-value: 7.02e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 6 FDQFSSPYLLGIPLIFLSMLLPPL-LLPTPNNRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLLLTIN 84
Cdd:MTH00035 8 FGQFSPDTILFIPLTLLSSVIALSwLFFINPTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSIN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 85 LLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTAN 164
Cdd:MTH00035 88 VLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAAN 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 37780721 165 LTAGHLLIQLISTaAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00035 168 LTAGHLLIFLLST-AIWELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQNI 229
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
39-225 |
5.03e-39 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 134.14 E-value: 5.03e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 39 ITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLLLTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGL 118
Cdd:MTH00157 38 IPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGW 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 119 RNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAGHLLIQLISTAAITLLPIMPAVSALtvtILF 198
Cdd:MTH00157 118 INNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLSSMILSILIL---IQI 194
|
170 180
....*....|....*....|....*..
gi 37780721 199 LLTMLELAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00157 195 LLLILESAVAIIQSYVFSVLSTLYSSE 221
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
2.36e-36 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 127.46 E-value: 2.36e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 1 MILTFFDQFSSPYLLGIPLIFLS-MLLPPLLLPTPNNRWIT-NRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMM 78
Cdd:MTH00176 1 MLVDLFSSFDPPNKNIFSMISLSwITLLLFLLLMPSSVWFCpSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 79 LLLTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALG 158
Cdd:MTH00176 81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 37780721 159 VRLTANLTAGHLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
90-224 |
2.67e-35 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 122.51 E-value: 2.67e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAGH 169
Cdd:cd00310 25 PYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANMFAGH 104
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 37780721 170 LLIQLISTAAITLLPImpaVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310 105 LLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
2-225 |
9.49e-33 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 118.43 E-value: 9.49e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 2 ILTFFDQFSSPYLLGIPLIFLSMLLPPLLLPTPNnRWITNRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLLL 81
Cdd:MTH00173 5 LFSSFDDHNSSFSSLSFLMWLLSLMSLFFFSSSV-WVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 82 TINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRL 161
Cdd:MTH00173 84 SLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRL 163
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 37780721 162 TANLTAGHLLIQLISTAAITLLPIMPAVSALTVTILFLL-TMLELAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00173 164 LANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLIQVGyFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
90-224 |
3.96e-31 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 113.74 E-value: 3.96e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTS-LGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAG 168
Cdd:pfam00119 81 PGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 37780721 169 HLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 161 HLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
2-222 |
3.47e-28 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 106.36 E-value: 3.47e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 2 ILTFFDQFSSPYLLGIPLIFLSMLLPPLLLPTPNNRWIT-NRLSTLQLWLTNMITKQLMTPLNKPGHKWAIILTSLMMLL 80
Cdd:MTH00005 5 IFSSFDPATNSLFNNLSSTAFWAFNFSIILLLSSSFWITpNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 81 LTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVR 160
Cdd:MTH00005 85 ILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFR 164
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780721 161 LTANLTAGHLLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLY 222
Cdd:MTH00005 165 LAANMSAGHIVLSLIGIYAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLY 226
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
90-227 |
5.00e-26 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 100.89 E-value: 5.00e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAGH 169
Cdd:MTH00172 92 PYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGH 171
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 37780721 170 LLIQLISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00172 172 LLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTI 229
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
5.26e-26 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 100.85 E-value: 5.26e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 1 MILTFFDQFSSPYLLGIPL-------------IFLSMLLPPLLLPTPNNRWITNRLSTLQLWLTNMITKQLMTPLNKPGH 67
Cdd:MTH00175 1 MLAAYFDQFNIIRLITIQAflgdwlvtftnssMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 68 KWAIILTSLMMLLLTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIET 147
Cdd:MTH00175 81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 148 ISLFIRPLALGVRLTANLTAGHLLIQLISTAAITLLPI-MPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNgLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240
|
.
gi 37780721 227 I 227
Cdd:MTH00175 241 I 241
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
90-225 |
6.08e-20 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 83.97 E-value: 6.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTS-LGHLLPEGTPtPLIPALILIETISLFIRPLALGVRLTANLTAG 168
Cdd:COG0356 78 PGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAG 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 169 HLLIqlistAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQE 225
Cdd:COG0356 157 HIIL-----LLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
91-225 |
4.70e-18 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 79.45 E-value: 4.70e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 91 YTFTPTTQLSMNMALAFPLWLATLLTGLRNQpttSLGHLLPEGTPTPlIPALILIETISLFIRPLALGVRLTANLTAGHL 170
Cdd:PRK05815 95 LLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQP-HPLLLPIEIISEFSRPISLSLRLFGNMLAGEL 170
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 37780721 171 LIQLISTAAITLLPIMPAVSALTVtilfLLTMLELAVAMIQAYVFVLLLSLYLQE 225
Cdd:PRK05815 171 ILALIALLGGAGLLLALAPLILPV----AWTIFEIFVGTLQAYIFMMLTIVYISM 221
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
90-227 |
5.62e-18 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 79.98 E-value: 5.62e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAGH 169
Cdd:MTH00174 111 PYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGH 190
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 37780721 170 LLIQLISTAAITLLPIMPAV-SALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00174 191 LLFSIIASFAWKMINTGILIgSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVYLRDTV 249
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
90-225 |
6.58e-13 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 65.00 E-value: 6.58e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSlgHLLPEGTPTPLIP-ALILIETISLFIRPLALGVRLTANLTAG 168
Cdd:MTH00087 72 PYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEKFS--VYLSKGSDSFLKTfSMLFVEIVSELSRPLALTLRLTVNLMVG 149
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 37780721 169 HLLIQLISTaaitllpimpaVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00087 150 HLISSLLNF-----------LGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
90-223 |
1.01e-12 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 66.30 E-value: 1.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAGH 169
Cdd:PRK13419 191 PYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGH 270
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 37780721 170 LLI-QLISTAAITLLPIMPAVSALTVTILFLLtmLELAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13419 271 IVIlSLIFISFILKSYIVAVAVSVPFAIFIYL--LELFVAFLQAYIFTMLSALFI 323
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
94-223 |
5.54e-10 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 58.36 E-value: 5.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 94 TPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETI-SLFIRPLALGVRLTANLTAGHLLI 172
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 37780721 173 qlISTAAITLLPIMPAVSALTVTILFLLTMLELAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13417 297 --LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFV 345
|
|
| PRK13421 |
PRK13421 |
F0F1 ATP synthase subunit A; Provisional |
86-218 |
4.95e-03 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237383 Cd Length: 223 Bit Score: 36.98 E-value: 4.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780721 86 LGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTslGHLLPEGTPTPLIPALILIETISlfiRPLALGVRLTANL 165
Cdd:PRK13421 94 SSLVPGVEPPTAHLETDAALALIVFLATIYYGVRARGVR--GYLATFAEPTWVMIPLNLVEQLT---RTFSLIVRLFGNV 168
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 37780721 166 TAGHLLIQLISTAAITLLPIMpavsaltvtilflLTMLELAVAMIQAYVFVLL 218
Cdd:PRK13421 169 MSGVFVIGIVLSLAGLLVPIP-------------LMALDLLTGAVQAYIFAVL 208
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
90-168 |
9.55e-03 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 35.63 E-value: 9.55e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 37780721 90 PYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALILIETISLFIRPLALGVRLTANLTAG 168
Cdd:MTH00050 43 PYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
|
|
|