|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.08e-150 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 427.70 E-value: 1.08e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 81 TGQWDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 37780921 321 TNTPISVLTSLSISLLPLSPMIFTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-323 |
9.13e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 364.51 E-value: 9.13e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 81 TGQWDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSlNPILLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
...
gi 37780921 321 TNT 323
Cdd:MTH00135 320 QLT 322
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.90e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 358.46 E-value: 1.90e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 81 TGQWDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 37780921 321 TNTPISVLTSLSISLLPLSPMIFTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
2.72e-107 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 317.56 E-value: 2.72e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 81 TGQWDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITL-PPNPSSKMKqWSTKN 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMfPSTNNMKMK-WQFEN 319
|
....*.
gi 37780921 320 PTNTPI 325
Cdd:MTH00105 320 TKPMTL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.20e-93 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 282.63 E-value: 1.20e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 81 TGQWDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 37780921 321 TNTPISVLTSLSISLLPLSPMIFTIT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
7-322 |
5.42e-87 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 265.64 E-value: 5.42e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 7 LILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 87 AQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIMSIILGG 166
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 167 WMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPMLNTTLML 246
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780921 247 TLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNPTN 322
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNIT 322
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.91e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 191.96 E-value: 1.91e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 81 TGqwdiaqLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLlitSHSLNPILLTTMSIM 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLML-----NYNKNKWNLKKK 307
|
330 340
....*....|....*....|....*
gi 37780921 321 TNTPISVLTSLSISLLPLSPMIFTI 345
Cdd:MTH00160 308 KNKFSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-325 |
1.50e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 171.22 E-value: 1.50e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAqlthp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 93 pacLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL-LITSHSLNPILLTTMSIMSIILGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsNFLDLYWLAYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 172 QTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTlMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780921 252 AGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNPTNTPI 325
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLS-----SSKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-325 |
8.25e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 161.49 E-value: 8.25e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 1 MTPTAKLILTlSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTInawh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 81 tgQWDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 161 SIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKTK 316
|
....*
gi 37780921 321 TNTPI 325
Cdd:MTH00011 317 ILISM 321
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-313 |
2.17e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 152.13 E-value: 2.17e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTgqwdia 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 88 qLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPttLLLITSHSLNPILLTTMSIMSIILGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 168 MGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISKLSTLMTSWTKTPMLNTTLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780921 248 LLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMK 313
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-298 |
1.56e-32 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 126.38 E-value: 1.56e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 87 AQL--------THPP----ACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLN 150
Cdd:COG1007 186 AGIaaalaaggANSPllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 151 P---ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMI-IIAYNPK-LTLLTFY--TYVLMTASIFLTM---- 219
Cdd:COG1007 266 AdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYllAYLFMNLGAFAVIllls 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 220 ----NTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLR 295
Cdd:COG1007 346 rkggEAEEIEDLAGL---ARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLR 422
|
...
gi 37780921 296 LAY 298
Cdd:COG1007 423 VVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-296 |
1.13e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 115.69 E-value: 1.13e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:PRK05777 107 LLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSF 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 87 AQL--------THPP----ACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLN 150
Cdd:PRK05777 187 AGIakaladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLS 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 151 P---ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTL--LTFY--TYVLMTASIF--LTM-- 219
Cdd:PRK05777 267 EdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYllAYLFMTLGAFgvISLlr 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 220 ----NTTNISKLSTLmtSWTKtPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLR 295
Cdd:PRK05777 347 rkggEAESISDFAGL--SKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLR 423
|
.
gi 37780921 296 L 296
Cdd:PRK05777 424 V 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
2.36e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 113.20 E-value: 2.36e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFS-------------STINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 79 WHTGQWDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLppTTLLLITSHSLNPILLTTMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 159 IMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNP----KLTLLTFYTYVLMTASIF--LTMNTTNISKLSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiILALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780921 233 SWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.07e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.09 E-value: 5.07e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 23 SNHWTTAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL--THPPAC---- 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 96 -----LLLTTAIATKLGLAPLHFWFPEVLQGSSLT-TALLLSTIMKLPP-----TTLLLITSHSLNPILLTTMSIMSIIL 164
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 165 GGWMGLNQTQTRKIMAFSSISHLGWMMIIIA----YNPKLTLLTFYTYVLMTASIFL--------TMNTTNISKLSTLmt 232
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL-- 238
|
250 260 270
....*....|....*....|....*....|....*.
gi 37780921 233 sWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 239 -AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-296 |
3.92e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 102.40 E-value: 3.92e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 87 ----AQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTtmSIMSI 162
Cdd:MTH00199 181 qginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 163 ILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNP----KLTLLTFYTYVLMTA---SIFLTMNTTN--ISKLSTLMTs 233
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSIcsfSIILSLKLTKglIVEVSGLSR- 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 37780921 234 wtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00199 338 --KNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-297 |
8.54e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 98.87 E-value: 8.54e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSI-IPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:TIGR01770 106 ILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 87 AQLTH--------PPAC----LLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLL-------ITSH 147
Cdd:TIGR01770 186 EDLLLflsngmlnISLLllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 148 SLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTL--LTFY--TYVLMTASIFLTM---- 219
Cdd:TIGR01770 266 EAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllr 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 220 --NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLA 297
Cdd:TIGR01770 346 syKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
1.02e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 92.52 E-value: 1.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 14 LLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL---- 89
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 90 --THPP----ACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIM-KLPP----TTLLLITSHSLNP---ILLT 155
Cdd:COG0651 197 aeLDPGlllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailRVLTLLFGADPALflgTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 156 TMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYV----LMTASIFLT-------MNTTNI 224
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaieraTGTRDL 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780921 225 SKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGL---GKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
5.07e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 87.99 E-value: 5.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 3 PTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAI---------EAATKYFLVQAAASTLMLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 74 STINAWHTGQ--------------WDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLppT 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 140 TLLLITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYV---LMTASIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 217 LTM----------------------NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE 274
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 37780921 275 MTTTTMIISMASLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
2.18e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 79.92 E-value: 2.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTH--PPACLLLT------TAIAT 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 105 KLGLAPLHFWFPEVLQG-SSLTTALLLSTIMKLPPTTLLLITSH----------SLNPILLTTMsIMSIILGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfrfalGLGWLLAVLA-LLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 174 QTRKIMAFSSISHLGWMMIIIAYNPKLTLL--TFYT--YVLMTASIFL-------TMNTTNISKLSTLMTswtKTPMLNT 242
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLaagaievTYGTRRLSELSGLGR---RMPLTAA 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 37780921 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAY 298
Cdd:PRK08375 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
3-298 |
3.83e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.11 E-value: 3.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 3 PTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLS---IIPMISKshhpRAIEAATKYFLVQAAASTLMLFSSTINAW 79
Cdd:PRK08668 97 DAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 80 HTGQWDIA-------QLTHPP----ACLLLTTAIATKLGLAPLHFWFPE-----------VLQG--SSLTTALLLSTIMK 135
Cdd:PRK08668 173 KTGTFDFAdisqgliNDTSTGfaliVFLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYV 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 136 LPPTTLLL----ITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLT----LLTFYT 207
Cdd:PRK08668 253 LPGTKLFSefgtYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFN 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 208 YVLMTASIFLTM-------NTTNISKLSTLMTswtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTM 280
Cdd:PRK08668 333 HALFKGLFFLIFaaviyrtGTTKISEMGGLIE---KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAF 409
|
330
....*....|....*...
gi 37780921 281 IISMASLLGLFFYLRLAY 298
Cdd:PRK08668 410 MAFFGSIGSFLYVFRPLA 427
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-263 |
1.61e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 71.19 E-value: 1.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHP-RAIEAATKYFLVQAAASTLML--FSST-- 75
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLyg 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 76 INAWHTGQWDIA------QLTHPPACLL----LTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL--- 142
Cdd:CHL00049 188 LSGGEIELQEIVnglintQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALAtri 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 143 --LITSHSLNP--ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMI-IIAYNPKLTLLTFYTYVLmtasIFL 217
Cdd:CHL00049 268 fdIPFYFSSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNDGYASMITYML----FYI 343
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 37780921 218 TMN---------------TTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 344 FMNlgtfacivlfglrtgTDNIRDYAGL---YTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-291 |
2.45e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 70.50 E-value: 2.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW--DIAQLTHPP--------ACLLLTTAIAT 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPlpltaqllLFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 105 KLGLAPLHFWFPEVLQGSSLTTALLLSTIMK-----------LPpttLLLITSHSLNPILLTtMSIMSIILGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 174 QTRKIMAFSSISHLGWMMI-IIAYNPK-LT--LLTFYTYVLMTASIFLT-------MNTTNISKLSTLmtsWTKTPMLNT 242
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLLgIFALNPLgLQgaVLQMVSHGLITAALFLLvgvlydrTHTRDIADLGGL---AKRMPVLAA 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 37780921 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMT-----TTTMIISMASLLGLF 291
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWlailaALGLILTAAYLLWMY 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
9.89e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 65.94 E-value: 9.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTH-----------PPACLLLTTAIATKLGLAPLHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaaptilsspllTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 117 EVLQGSSLTTALL---------------LSTIMKLPPTTLLLITShslnpILLTTMsimsiILGGWMGLNQTQTRKIMAF 181
Cdd:COG1009 236 DAMEGPTPVSALLhaatmvkagvyllarLSPLFALSPVWLTVVAI-----IGAITA-----LFAALIALAQTDIKRVLAY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 182 SSISHLGWMMIII---AYNPKLTLLTfyTYVLMTASIFL-------TMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSL 251
Cdd:COG1009 306 STVSQLGYMFLALgvgAYVAALFHLL--THAFFKALLFLgagsvihATGTRDIRKMGGL---RKKMPITAITFLIGALSL 380
|
250 260
....*....|....*....|
gi 37780921 252 AGLPPLTGFLPKWLIIQELI 271
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAAL 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-298 |
4.06e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 63.84 E-value: 4.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLT----------------HPPACLLLTTAIAT-----KL 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSakirglsfpltgglagNPPLALGVALALALwaftiKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 107 GLAPLHFWFPEVLQGSSLTTALLLSTIMK--------------LPPTTLLLITSHSLNPILLTTMSImSIILGGWMGLNQ 172
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVnvgayaiirflytiFGISPSLIDFRAALSPILIILGAV-SAIIGALMMVVQ 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 173 TQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVL----------MTASIFL-TMNTTNISKLSTLMtswTKTPMLN 241
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVFIhAAGTRDIDELAGLG---RKMPIAS 393
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 37780921 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAY 298
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
5.06e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.58 E-value: 5.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 33 LEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTH----------PPACLLLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVkmsenptvvaKIALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 102 IATKLGLAPLHFWFPEVLQG--SSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIMSI------ILGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIIlgcltmFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 174 QTRKIMAFSSISHLGWMMI-----IIAYNPklTLLTFYTYVLMTASIFLTMN--------------------TTNISKLS 228
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNhalykallfltagaviyetgTRNLNELG 387
|
250 260 270
....*....|....*....|....*....|....*...
gi 37780921 229 TLMTswtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 388 GLAR---TMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
5.08e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 63.53 E-value: 5.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 50 PRAIEAATKYFLVQAAASTLMLFSST----INAWHTGQWDIAQL----THPPACLLLTTAIAT---KLGLAPLHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALAlitsPSLGLALALVFVIAGiafKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 119 LQGSSLTTALLLSTIMKLPPTTL---LLITSHSLNP----ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMM 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDeqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 192 I--IIAYNPKLTLLTFY--TYVLMTASIF-------LTMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGF 260
Cdd:PRK02504 317 IglVAGTEAGYASMVFYllAYLFMNLGAFacvilfsLRTGTDQISDYAGL---YQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 37780921 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-288 |
3.00e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 61.11 E-value: 3.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 50 PRAIEAATKYFLVQAAASTLMLFSSTINAW-HTGQWDIAQLTHPPACLLLTT--------AIATKLGLAPLHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 120 QGSSLTTALLLSTIMKLPPTTLLLI-------TSHSLNPILLtTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAPVLA-ALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 193 IIAYNPKL----TLLTFYTYVLMTASIFLT-------MNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFL 261
Cdd:TIGR01972 311 GIFSFNELgisgAVFQMISHGLITAALFLLvgvlyerAHTRDIAKYGGL---ANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
250 260
....*....|....*....|....*..
gi 37780921 262 PKWLIIQELIKqeMTTTTMIISMASLL 288
Cdd:TIGR01972 388 GEFLILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-263 |
1.20e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 59.55 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 55 AATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-THPPACLLLTTAIA-------TKLGLAPLHFWFPEVLQGSSLTT 126
Cdd:PRK12644 158 AALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELlADPPTGPAVSVAVVlilvgalSKSAIVPFHFWLPGAMAAPTPVS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 127 ALLLSTIM---------KLPPTtllLITSHSLNPILLTtMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYN 197
Cdd:PRK12644 238 AYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIG 313
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780921 198 PKLTLLTFYTYV----LMTASIFLTMN-------TTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 314 TRDAALAGLAMLlahaLFKAALFLVVGiidhstgTRDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-195 |
6.11e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 57.13 E-value: 6.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFS----STINAWHTGQWDIAQLTHPPACLLLTT--------AI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 103 ATKLGLAPLHFWFPEVLQ-----GSSLTTALLLST-------IMkLPpttLLLITSHSLNPILLTtMSIMSIILGGWMGL 170
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVqaptaGSVLLAGILLKMgaygllrFS-LP---LFPDASHEFAPIIIT-LGVIAIIYGALVAL 296
|
170 180
....*....|....*....|....*
gi 37780921 171 NQTQTRKIMAFSSISHLGWMMIIIA 195
Cdd:PRK05846 297 AQTDIKKLIAYSSISHMGFVTLGIF 321
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.19e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 56.38 E-value: 1.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTHPPACL--------------LLTTAIATKLGLAPLHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 114 WFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSLNP------ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHL 187
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHPIFSgteawfILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 188 GWMMIIIAYNPK--------------LTLLTFYTYVLMTASIFLTMNTT-NISKLSTLMtswTKTPMLNTTLMLTLLSLA 252
Cdd:PRK12649 315 AYLMTMYGYTTYhepglgvaaatfhlLNHATFKACLFLVAGIVAHEAATrDIRKLGGLR---KEMPITFIVASIAALAMA 391
|
250
....*....|.
gi 37780921 253 GLPPLTGFLPK 263
Cdd:PRK12649 392 GIPPLNGFLSK 402
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-190 |
4.15e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 51.47 E-value: 4.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 20 TITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYF---------------LVQAAASTLMLFSSTINAWhTGQW 84
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMGDGEMAILW-TELL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 85 DIAQLTHPP----ACLLLTTAIATKLGLAPLHFWFPE-----------VLQGSSLTTAL---------LLSTIMKLPPTT 140
Cdd:PRK06458 203 KHASLLDPTlmklAFVFLLIGFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyavlryyilIDAAIGSDFPGR 282
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 37780921 141 LLLItshslnpillttMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWM 190
Cdd:PRK06458 283 LLLI------------FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-195 |
1.25e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 50.03 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 55 AATKYFLVQAAASTLMLFSSTINAWHTGQ--WDIAQLT--HPPACLLL------TTAIATKLGLAPLHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGakSYPLALELllyagfLIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 37780921 124 LTTALLLSTIMKLPPTTL------LLITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIA 195
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIA 295
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
1.51e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.64 E-value: 1.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 34 EINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL--------THPP---ACLLLTTAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIhnallvnpTSPViygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 103 ATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLIT-----SHSLNPI---LLTTMSIMSIILGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSaqgVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 175 TRKIMAFSSISHLGWMMIIIAYNPKLT----LLTFYTYVLMTASIFL-------TMNTTNISKLSTLMTSwtkTPMLNTT 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLgagivsyRTKTSNLRKLGGLLPV---MPVVAFM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 37780921 244 LMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
1.61e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.04 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 29 AWaglEINTLSIIPMISKSHhPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTHPPA-----------CLL 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 98 LTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNP-----ILLTTMSIMSIILGGWMGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDvavwnWLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 173 TQTRKIMAFSSISHLGWM--MIIIAYNPKLTLLTFYT--YVLMTASIFLTM-------NTTNISKLSTLmtsWTKTPMLN 241
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvaTIGVGTPFALTAAVVHTlaHALFKSSLFMLIgvvdhqaGTRDIRRLGSL---WRRMPFTF 370
|
250 260
....*....|....*....|..
gi 37780921 242 TTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 371 VSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
3.25e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 48.60 E-value: 3.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAA------STLMLFSSTINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 87 AQLTH-----PPACLLLT-----TAIATKLGLAPLHFWFPEV-LQGSSLTTALLLSTIMKLPPTTLLLITS-------HS 148
Cdd:PRK08676 191 TELAAhasllSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780921 149 LNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYVL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-311 |
3.79e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.53 E-value: 3.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 95 CLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITS-----HSLNPILLTTMSIMSIILGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplfeqAPLALIIVTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 170 LNQTQTRKIMAFSSISHLGWMMIIIA-YNPKLTLLTFYTYVLMTASIFLTMNTT--------NISKLSTLMTSwtkTPML 240
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACGlSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeqDMRKMGGLISF---LPLT 369
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780921 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE-MTTTTMIISMASLLGLFFYLRLAYCSTITlppNPSSK 311
Cdd:MTH00020 370 YIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYyLIFAYWLGCFSALLTAFYSIRLIYLTFLS---NTNLK 438
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-296 |
5.49e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.02 E-value: 5.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 58 KYFLVQAAASTL------MLFS--STINAWHTGQwDIAQLTHPPACLLLTTAI------ATKLGLAPLHFWFPEVLQG-- 121
Cdd:PRK07691 162 KYVLINVVSSAFfvvavaILYSvvGTLNMADISV-KIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYApp 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 122 ---SSLTTALL----LSTIMKLppTTLLLITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK07691 241 iaiAALFGALLtkvgVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGV 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 195 AYNPKLTLL--TFYT--YVLMTASIFLTM-------NTTNISKLSTLMTSWtktPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK07691 319 AMMTESGMIgaIYYLihDMIVKAALFLLIgimikitGTTDLKKMGGLIKRY---PVLGWMFFIAALSLAGIPPLSGFYGK 395
|
250 260 270
....*....|....*....|....*....|...
gi 37780921 264 WLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK07691 396 FFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-296 |
9.36e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.04 E-value: 9.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 5 AKLILTLSILLGTtitITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW 84
Cdd:PRK12662 114 SAFLLCLGGLLGI---LVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 85 ---DIAQLTHP--------PACLLLTTAIATKLGLAPLHFWFPEVLQG---------SSLTTALLLSTIMKLPPTTL--- 141
Cdd:PRK12662 191 nmgDMFLIIQDlptnraiqIGVLFIMVGLFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDVFkan 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 142 LLITSHSLNPILLTtMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYV----LMTASIFL 217
Cdd:PRK12662 271 FVFTTLPFNNVFMI-LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFM 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 218 TM-------NTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGL 290
Cdd:PRK12662 350 VSgsisyhfGTTKLEDCLNL---WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSV 426
|
....*.
gi 37780921 291 FFYLRL 296
Cdd:PRK12662 427 IYVWKI 432
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
1.06e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.26 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 111 LHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL-----LITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 186 HLGWMMIIIAY--NPKLTLLTFYTYVLMTASIFL---------TMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGL 254
Cdd:MTH00032 324 QLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLIGSFSIMGL 400
|
170
....*....|....
gi 37780921 255 PPLTGFLPKWLIIQ 268
Cdd:MTH00032 401 PYLTGFYSKDLILE 414
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
92-266 |
1.43e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 46.84 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 92 PPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSL--NPILLTTMSI---MSIILGG 166
Cdd:PRK12647 195 LAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLggTPLWQTILPLfggLTMLTGA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 167 WMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLLTFYTYV----LMTASIFLT-------MNTTNISKLSTLmtsWT 235
Cdd:PRK12647 275 LLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVagiidheTGTRDITKLGGL---RR 351
|
170 180 190
....*....|....*....|....*....|.
gi 37780921 236 KTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.53e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 46.48 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTH--PPACLLLTTAIATKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 111 LHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPI--LLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 189 WMMIIIAYNPKLTLltfyTYVLMTASIFL---TMNTTNISKL-STLMTSWTKTPmlnttLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLcagALPSRNFTELiSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 37780921 265 LIIQELI 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-272 |
1.72e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 46.67 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 92 PPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshSLNPIL---------LTTMSIMSI 162
Cdd:PRK12646 210 IPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLF----RFTPLLglsnmyiyiVTFVGLITM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 163 ILGGWMGLNQTQTRKIMAFSSISHLGWMMIII------AYNPKLTLLTFYTYVLMtASIFLTMN---------------- 220
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMNhaifkcalfmgvgiid 364
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 37780921 221 ----TTNISKLSTLMTSWtktPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK12646 365 heagTRDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
2.66e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.88 E-value: 2.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 59 YFLVQAAASTLMLFSSTINAW-HTGQWDIAQLTHPPAC-----LLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 133 IM-KLPPTTLLLITSHSLNP-----ILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAY--------NP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvygLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 199 KLTLLT-------------FYTYVLMTA-SIFLTMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 326 TLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260
....*....|....*....|....*...
gi 37780921 265 LIIQELIKQEMTTTTMI-ISMASLLGLF 291
Cdd:PRK08667 403 LLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-296 |
5.32e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.94 E-value: 5.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 53 IEAATKYFLVQAAASTLMLFS--------STINAWHTGQwDIAQLTHPPA----CLLLTTAIATKLGLAPLhFWFPEVLQ 120
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGigllygtfGTLNMAHIAM-RLNDMGDTATlttiALLFLLAFGMKAALFPF-MWLPAAYH 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 121 GSSLTTALLLSTIMK-------LPPTTLLLITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMII 193
Cdd:PRK12663 235 TPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 194 IAYNPKLTL--LTFY---TYVLMTASIFLT---MNTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK12663 315 LALGTPAGIngAIFYlvhDMVVKTALFLIAgslVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVL 394
|
250 260 270
....*....|....*....|....*....|.
gi 37780921 266 IIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK12663 395 LVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
9.84e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.93 E-value: 9.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 96 LLLTTAI----ATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPIL-------LTTMSIMSIIL 164
Cdd:PRK07363 205 LILLTGLllgfGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTwslvapgLAIIGTISVIY 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 165 GGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYNPKLTLL----TFYTYVLMTASIF-------LTMNTTNISKLSTLMTS 233
Cdd:PRK07363 285 GALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaQMISHGLILALLFhlvgiveRKVGTRDLDVLNGLMNP 364
|
170 180 190
....*....|....*....|....*....|....*
gi 37780921 234 WTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 365 IRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-268 |
2.19e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 43.03 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 50 PRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL----------THPPACLLLTTAIATKLGLAPLHFWFPEVL 119
Cdd:PRK12665 157 AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldelpsgTRTALFAVLLVAFGIKAAVFPLSFWLPDSY 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 120 -QGSSLTTALLLSTIMK-----LPPTTLLLITSHSLNPILLTtMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMII 193
Cdd:PRK12665 237 pTAPAPVTAVFAGLLTKvgvyaIIRTHTLLFPGGGLDTLLMV-VALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFG 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 194 IAYNPKLTLLTFYTYV----LMTASIFLTMN-------TTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLP 262
Cdd:PRK12665 316 IALSTVAGLSGAIYYVahhiTVQTTLFLVVGlierqagSSSLRRLGGLAKA---SPLLAVLFFVPALNLGGIPPFSGFIG 392
|
....*.
gi 37780921 263 KWLIIQ 268
Cdd:PRK12665 393 KVALLE 398
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
2.21e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 55 AATKYFLVQAAASTLMLFSSTINAWHTG--QWDIAQL---THPPACLLLTTA-----IATKLGLAPLHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 124 LTTALLLSTIMKLPPTTLL------LITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 198 PKLTLLT----FYTYVLMTASIFLTM-------NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAavfqMISHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
69-300 |
3.94e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 42.25 E-value: 3.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 69 LMLFSSTINAWHTGQWDIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshS 148
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLI----R 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 149 LNPILLTTMSIMSIIL---------GGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYN-PKLTLLTFYTYVLMTASIFL- 217
Cdd:MTH00211 257 LSPLFQNNQLILGAVLllgaltmlfGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFFKAMLFMc 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 218 -------TMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIIS-MASLLG 289
Cdd:MTH00211 337 sgsiihgLNNEQDIRKMGGLSKN---LPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTlLATSLT 413
|
250
....*....|.
gi 37780921 290 LFFYLRLAYCS 300
Cdd:MTH00211 414 AAYSFRLIFLS 424
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
157-300 |
4.25e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 41.94 E-value: 4.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 157 MSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIAYN-PKLTLLTFYTYVLMTASIFLT--------MNTTNISKL 227
Cdd:MTH00209 245 LGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICagniihshGHSQDIRMV 324
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780921 228 STLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASL-LGLFFYLRLAYCS 300
Cdd:MTH00209 325 GNL---WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
14-195 |
7.47e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 41.22 E-value: 7.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 14 LLGTTITITSNHWTT---AWAGLEI---NTLSIIPmisksHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIA 87
Cdd:PRK08168 110 LAAVHLLVLSDHLLVliaAWAAISLalhRLLCFYP-----DRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 88 QL--------THPP---ACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTL-----LLITSHSLNP 151
Cdd:PRK08168 185 ALwahlaaqgASPSlqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLirfapLLEQAPPARW 264
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 37780921 152 ILLtTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIA 195
Cdd:PRK08168 265 LLV-LVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECG 307
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.22e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.58 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 107 GLAPLHFWFPEVLQGSSLTTALLLSTI-MKLPPTTLLLITSHSLNP-----ILLTTMSIMSIILGGWMGLNQTQTRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 181 FSSISHLGWMMI--------IIAYNPKLTLLTFY--------------TYVLMTASIFLTMNTTNISKLSTLmtsWTKTP 238
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVgglyhllnhslfksVLFLGAGSVWFRTGHRDIEKLGGI---GKKMP 351
|
170 180 190
....*....|....*....|....*....|....
gi 37780921 239 MLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-195 |
1.31e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.46 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 55 AATKYFLVQAAASTLMLFSSTINAWHTGQ-----WDIAQLTHPPACLLLT-----TAIATKLGLAPLHFWFPEVLQGSSL 124
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYGDTptfdmTALAAKDFGLGFQLLCyagllIAYGVKLPIVPLHTWLPDAHGEATA 245
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 37780921 125 TTALLLSTIM-KLPPTTLL------LITSHSLNPILLTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGWMMIIIA 195
Cdd:PRK02546 246 PVHMLLAGILlKMGGYALLrmnagmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG 323
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
8-296 |
1.72e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 40.14 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIA 87
Cdd:PRK08377 112 MLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 88 QLTHPPACL----------LLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLST------IMKLPPTTLLLITSHSLNP 151
Cdd:PRK08377 192 HIAQLAGTIdptvaqvglaLLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAfvvkagLYAMARILYLMQNANGWSS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 152 IL--LTTMSIMSIILGGWMGLNQTQTRKIMAFSSISHLGwmMIIIAYNPKLTL------LTFYTYVLMTASIFLTMNTTN 223
Cdd:PRK08377 272 VLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVG--MIALALALGTQAgvdagvFHMINHAIVKALLFLAVGYVG 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780921 224 ISKLSTLMTSWT----KTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK08377 350 ITLGGTEIEKFEglgkRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-285 |
2.45e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.41 E-value: 2.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 9 LTLSILLGTTITITSNHWTTaWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTI---NAWHTGQW- 84
Cdd:PRK06589 122 FNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFv 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 85 --DIAQLTHPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIM----KLPPTTLLLITSHSLNPILLTTMS 158
Cdd:PRK06589 201 sgGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEF 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 159 -------IMSIILGGWMGLNQTQTRKIMAFSSISHLGWMM----IIIAYNPKLTLLTFYTYVLMTASIFLTMNTTNISK- 226
Cdd:PRK06589 281 nwlifipIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsafILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKk 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780921 227 ---LSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMA 285
Cdd:PRK06589 361 edqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLV 422
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
95-311 |
2.70e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.61 E-value: 2.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 95 CLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSL---NPILLTTMSI---MSIILGGWM 168
Cdd:MTH00210 214 CLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATM-VTAGVFLIIRSGPLfegSPLALTIVTIlgaLTAFFAATV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780921 169 GLNQTQTRKIMAFSSISHLGWM-MIIIAYNPKLTLLTFYTYVLMTASIFLTMNTT--------NISKLSTLMTSwtkTPM 239
Cdd:MTH00210 293 GVVQNDLKKVIAYSTCSQLGYMvMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVihavsdeqDMRKMGGLIKS---IPF 369
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780921 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIqELI--KQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppNPSSK 311
Cdd:MTH00210 370 TYVMILIGSLSLMGFPYLTGFYSKDLIL-ELTydKYYIAFAYWLGSFSALLTAFYSIRLIYLTFIT---NTNSK 439
|
|
| |
