|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.42e-151 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 428.09 E-value: 7.42e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 161 SVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 37780955 321 TNTPISVLTSLSISLLPLSPMIFTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-323 |
3.68e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 360.27 E-value: 3.68e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSlNPILLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 161 SVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
...
gi 37780955 321 TNT 323
Cdd:MTH00135 320 QLT 322
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.23e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 358.85 E-value: 1.23e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 161 SVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 37780955 321 TNTPISVLTSLSISLLPLSPMIFTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
3.71e-108 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 319.48 E-value: 3.71e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 161 SVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITL-PPNPSSKMKqWSTKN 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMfPSTNNMKMK-WQFEN 319
|
....*.
gi 37780955 320 PTNTPI 325
Cdd:MTH00105 320 TKPMTL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.65e-93 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 281.09 E-value: 4.65e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 81 TGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 161 SVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 37780955 321 TNTPISVLTSLSISLLPLSPMIFTIT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
7-322 |
7.67e-87 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 265.26 E-value: 7.67e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 7 LILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 87 AQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIMSVTLGG 166
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 167 WMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPMLNTTLML 246
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780955 247 TLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNPTN 322
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNIT 322
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.77e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 191.96 E-value: 1.77e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 81 TGqwdiaqLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLlitSHSLNPILLTTMSIM 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 161 SVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLML-----NYNKNKWNLKKK 307
|
330 340
....*....|....*....|....*
gi 37780955 321 TNTPISVLTSLSISLLPLSPMIFTI 345
Cdd:MTH00160 308 KNKFSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-325 |
6.01e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 172.38 E-value: 6.01e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAqltyp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 93 pacLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL-LITSHSLNPILLTTMSIMSVTLGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsNFLDLYWLAYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 172 QTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTlMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780955 252 AGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNPTNTPI 325
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLS-----SSKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-325 |
2.07e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 160.33 E-value: 2.07e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 1 MTPTAKLILTlSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTInawh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 81 tgQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSIM 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 161 SVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKTK 316
|
....*
gi 37780955 321 TNTPI 325
Cdd:MTH00011 317 ILISM 321
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-313 |
7.08e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 153.67 E-value: 7.08e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTgqwdia 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 88 qLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPttLLLITSHSLNPILLTTMSIMSVTLGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 168 MGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYILMTASIFLTMNTTNISKLSTLMTSWTKTPMLNTTLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780955 248 LLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMK 313
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-298 |
1.94e-32 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 126.00 E-value: 1.94e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLF--------SSTIN- 77
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTGSLNl 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 78 ---AWHTGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLN 150
Cdd:COG1007 186 agiAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 151 P---ILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMI-IITYNPK-LTLLTFY--TYILMTASIFLTM---- 219
Cdd:COG1007 266 AdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYllAYLFMNLGAFAVIllls 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 220 ----NTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLR 295
Cdd:COG1007 346 rkggEAEEIEDLAGL---ARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLR 422
|
...
gi 37780955 296 LAY 298
Cdd:COG1007 423 VVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.09e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 113.97 E-value: 1.09e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFS-------------STINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 79 WHTGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLppTTLLLITSHSLNPILLTTMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 159 IMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNP----KLTLLTFYTYILMTASIF--LTMNTTNISKLSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiILALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780955 233 SWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-296 |
2.05e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 114.92 E-value: 2.05e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:PRK05777 107 LLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSF 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 87 AQL--------TYPP----ACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLN 150
Cdd:PRK05777 187 AGIakaladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLS 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 151 P---ILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMI---IITYNPKLTLLtFY--TYILMTASIF--LTM- 219
Cdd:PRK05777 267 EdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaAGTAEGYSAVL-FYllAYLFMTLGAFgvISLl 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 220 -----NTTNISKLSTLmtSWTKtPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYL 294
Cdd:PRK05777 346 rrkggEAESISDFAGL--SKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYL 422
|
..
gi 37780955 295 RL 296
Cdd:PRK05777 423 RV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.60e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 103.16 E-value: 2.60e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 23 SNHWTTAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-TYPPAC----- 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 96 -----LLLTTAIATKLGLAPFHFWFPEVLQGSSLT-TALLLSTIMKLPP------TTLLLITSHSLNPILLTtMSIMSVT 163
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGyglirrSLLYLPSSPFIQQILLI-LAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 164 LGGWMGLNQTQTRKIMAFSSISHLGWMMIII----TYNPKLTLLTFYTYILMTASIFL--------TMNTTNISKLSTLm 231
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL- 238
|
250 260 270
....*....|....*....|....*....|....*..
gi 37780955 232 tsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 239 --AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-297 |
3.41e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.02 E-value: 3.41e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSI-IPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:TIGR01770 106 ILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 87 AQL-----TYPP-------ACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLL-------ITSH 147
Cdd:TIGR01770 186 EDLllflsNGMLnisllllGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 148 SLNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTL--LTFY--TYILMTASIFLTM---- 219
Cdd:TIGR01770 266 EAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllr 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 220 --NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLA 297
Cdd:TIGR01770 346 syKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-296 |
4.62e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 99.32 E-value: 4.62e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 87 ----AQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTtmSIMSV 162
Cdd:MTH00199 181 qginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 163 TLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNP----KLTLLTFYTYILMTA---SIFLTMNTTN--ISKLSTLMTs 233
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSIcsfSIILSLKLTKglIVEVSGLSR- 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 37780955 234 wtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00199 338 --KNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
3.73e-19 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 87.90 E-value: 3.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 14 LLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL---- 89
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 90 -TYPP-----ACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIM-KLPP----TTLLLITSHSLNP---ILLT 155
Cdd:COG0651 197 aELDPglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailRVLTLLFGADPALflgTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 156 TMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLL--TFYT--YILMTASIFLT-------MNTTNI 224
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAgaLFHLlnHALAKALLFLAagaieraTGTRDL 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780955 225 SKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGL---GKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
3.81e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 88.38 E-value: 3.81e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 3 PTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAI---------EAATKYFLVQAAASTLMLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 74 STINAWHTGQ--------------WDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLppT 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 140 TLLLITSHSLNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYI---LMTASIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 217 LTM----------------------NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE 274
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 37780955 275 MTTTTMIISMASLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
4.30e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 72.99 E-value: 4.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLT--YPPACLLLT------TAIAT 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 105 KLGLAPFHFWFPEVLQG-SSLTTALLLSTIMKLPPTTLLLITSH----------SLNPILLTTMSiMSVTLGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfrfalGLGWLLAVLAL-LSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 174 QTRKIMAFSSISHLGWMMIIITYNPKLTLL--TFY---------TYILMTASIFLTMNTTNISKLSTLMTswtKTPMLNT 242
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHllhhalmkgALFLAAGAIEVTYGTRRLSELSGLGR---RMPLTAA 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 37780955 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAY 298
Cdd:PRK08375 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-263 |
4.93e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 72.73 E-value: 4.93e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHP-RAIEAATKYFLVQAAASTLML--FSST-- 75
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLyg 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 76 INAWHTGQWDIA------QLTYPPACLL----LTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL--- 142
Cdd:CHL00049 188 LSGGEIELQEIVnglintQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALAtri 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 143 --LITSHSLNP--ILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMI-IITYNPKL---TLLTF-YTYILMTA 213
Cdd:CHL00049 268 fdIPFYFSSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNDgyaSMITYmLFYIFMNL 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 37780955 214 SIF-------LTMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 348 GTFacivlfgLRTGTDNIRDYAGL---YTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-291 |
2.55e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 67.41 E-value: 2.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW-----DIAQLTYPPA-----CLLLTTAIAT 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 105 KLGLAPFHFWFPEVLQGSSLTTALLLSTIMK-----------LPpttLLLITSHSLNPILLTtMSIMSVTLGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 174 QTRKIMAFSSISHLGWMMI-IITYNPK-LTLLTFY--TYILMTASIFLT-------MNTTNISKLSTLmtsWTKTPMLNT 242
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQmvSHGLITAALFLLvgvlydrTHTRDIADLGGL---AKRMPVLAA 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 37780955 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMT-----TTTMIISMASLLGLF 291
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWlailaALGLILTAAYLLWMY 428
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
9.15e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.84 E-value: 9.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 50 PRAIEAATKYFLVQAAASTLMLFSST----INAWHTGQWDIAQL----TYPPACLLLTTAIAT---KLGLAPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALAlitsPSLGLALALVFVIAGiafKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 119 LQGSSLTTALLLSTIMKLPPTTL---LLITSHSLNP----ILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMM 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDeqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 192 I--IITYNPKLTLLTFY--TYILMTASIF-------LTMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGF 260
Cdd:PRK02504 317 IglVAGTEAGYASMVFYllAYLFMNLGAFacvilfsLRTGTDQISDYAGL---YQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 37780955 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
3-298 |
1.90e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.02 E-value: 1.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 3 PTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLS---IIPMISKshhpRAIEAATKYFLVQAAASTLMLFSSTINAW 79
Cdd:PRK08668 97 DAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 80 HTGQWDIAQ----LTYPP-------ACLLLTTAIATKLGLAPFHFWFPE-----------VLQG--SSLTTALLLSTIMK 135
Cdd:PRK08668 173 KTGTFDFADisqgLINDTstgfaliVFLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYV 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 136 LPPTTLLL----ITSHSLNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLT----LLTFYT 207
Cdd:PRK08668 253 LPGTKLFSefgtYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFN 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 208 YILMTASIFLTM-------NTTNISKLSTLMtswTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTM 280
Cdd:PRK08668 333 HALFKGLFFLIFaaviyrtGTTKISEMGGLI---EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAF 409
|
330
....*....|....*...
gi 37780955 281 IISMASLLGLFFYLRLAY 298
Cdd:PRK08668 410 MAFFGSIGSFLYVFRPLA 427
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
4.61e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 64.02 E-value: 4.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-----------TYPPACLLLTTAIATKLGLAPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptilsspLLTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 117 EVLQGSSLTTALL---------------LSTIMKLPPTTLLLITShslnpILLTTMsimsvTLGGWMGLNQTQTRKIMAF 181
Cdd:COG1009 236 DAMEGPTPVSALLhaatmvkagvyllarLSPLFALSPVWLTVVAI-----IGAITA-----LFAALIALAQTDIKRVLAY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 182 SSISHLGWMMIII---TYNPKLTLLTfyTYILMTASIFL-------TMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSL 251
Cdd:COG1009 306 STVSQLGYMFLALgvgAYVAALFHLL--THAFFKALLFLgagsvihATGTRDIRKMGGL---RKKMPITAITFLIGALSL 380
|
250 260
....*....|....*....|
gi 37780955 252 AGLPPLTGFLPKWLIIQELI 271
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAAL 400
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
3.69e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.88 E-value: 3.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 33 LEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTY----------PPACLLLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVkmsenptvvaKIALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 102 IATKLGLAPFHFWFPEVLQG--SSLTTALLLSTIMKLPPTTLLLIT--SHSLNPI----LLTTMSIMSVTLGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 174 QTRKIMAFSSISHLGWMMI-----IITYNPklTLLTFYTYILMTASIFLTMN--------------------TTNISKLS 228
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNhalykallfltagaviyetgTRNLNELG 387
|
250 260 270
....*....|....*....|....*....|....*...
gi 37780955 229 TLMTswtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 388 GLAR---TMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-288 |
2.99e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.03 E-value: 2.99e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 50 PRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW----DIAQLTYPPAC-----LLLTTAIATKLGLAPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 120 QGSSLTTALLLSTIMKLPPTTLLLI-------TSHSLNPILLtTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAPVLA-ALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 193 -IITYNPKLTLLTFYTYI---LMTASIFLT-------MNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFL 261
Cdd:TIGR01972 311 gIFSFNELGISGAVFQMIshgLITAALFLLvgvlyerAHTRDIAKYGGL---ANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
250 260
....*....|....*....|....*..
gi 37780955 262 PKWLIIQELIKqeMTTTTMIISMASLL 288
Cdd:TIGR01972 388 GEFLILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-263 |
4.69e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 58.01 E-value: 4.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 55 AATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-TYPPACLLLTTAIA-------TKLGLAPFHFWFPEVLQGSSLTT 126
Cdd:PRK12644 158 AALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELlADPPTGPAVSVAVVlilvgalSKSAIVPFHFWLPGAMAAPTPVS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 127 ALLLSTIM---------KLPPTtllLITSHSLNPILLTtMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN 197
Cdd:PRK12644 238 AYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIG 313
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780955 198 PKLTLLTFYTYI----LMTASIFLTMN-------TTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 314 TRDAALAGLAMLlahaLFKAALFLVVGiidhstgTRDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
2.25e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 55.61 E-value: 2.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTYPPACL--------------LLTTAIATKLGLAPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 114 WFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSLNP------ILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHL 187
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHPIFSgteawfILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 188 GWMMIIITYNPK--------------LTLLTFYTYILMTASIFLTMNTT-NISKLSTLMtswTKTPMLNTTLMLTLLSLA 252
Cdd:PRK12649 315 AYLMTMYGYTTYhepglgvaaatfhlLNHATFKACLFLVAGIVAHEAATrDIRKLGGLR---KEMPITFIVASIAALAMA 391
|
250
....*....|.
gi 37780955 253 GLPPLTGFLPK 263
Cdd:PRK12649 392 GIPPLNGFLSK 402
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-266 |
1.57e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.00 E-value: 1.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 91 YPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSL--NPILLTTMSIMSVT---LG 165
Cdd:PRK12647 194 YLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLggTPLWQTILPLFGGLtmlTG 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 166 GWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYI----LMTASIFLT-------MNTTNISKLSTLmtsW 234
Cdd:PRK12647 274 ALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVagiidheTGTRDITKLGGL---R 350
|
170 180 190
....*....|....*....|....*....|..
gi 37780955 235 TKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 351 RAMPITAAAALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-194 |
2.26e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 52.13 E-value: 2.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFS----STINAWHTGQWDIAQLTYPPACLLLTT--------AI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 103 ATKLGLAPFHFWFPEVLQ-----GSSLTTALLLST-------IMkLPpttLLLITSHSLNPILLTtMSIMSVTLGGWMGL 170
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVqaptaGSVLLAGILLKMgaygllrFS-LP---LFPDASHEFAPIIIT-LGVIAIIYGALVAL 296
|
170 180
....*....|....*....|....
gi 37780955 171 NQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK05846 297 AQTDIKKLIAYSSISHMGFVTLGI 320
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
97-263 |
1.39e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.04 E-value: 1.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 97 LLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNP-----ILLTTMSIMSVTLGGWMGLN 171
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDvavwnWLLIIVGMITALMGAVFAVQ 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 172 QTQTRKIMAFSSISHLGWM--MIIITYNPKLTLLTFYT--YILMTASIFLTM-------NTTNISKLSTLmtsWTKTPML 240
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIvaTIGVGTPFALTAAVVHTlaHALFKSSLFMLIgvvdhqaGTRDIRRLGSL---WRRMPFT 369
|
170 180
....*....|....*....|...
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 370 FVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-194 |
2.16e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 49.37 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAA------STLMLFSSTINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 87 AQLT-----YPPACLLLT-----TAIATKLGLAPFHFWFPEV-LQGSSLTTALLLSTIMKLPPTTLLLITS-------HS 148
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 37780955 149 LNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGI 316
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
72-311 |
2.25e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 49.31 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 72 FSSTINAWHTGqwDIAQLTYPpaCLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITS----- 146
Cdd:MTH00020 194 FSSVFNMVVSA--PSSDITLI--CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplfeq 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 147 HSLNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIII-TYNPKLTLLTFYTYILMTASIFLTMNTT--- 222
Cdd:MTH00020 270 APLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSViha 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 223 -----NISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE-MTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00020 350 lsdeqDMRKMGGLISF---LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYyLIFAYWLGCFSALLTAFYSIRL 426
|
250
....*....|....*
gi 37780955 297 AYCSTITlppNPSSK 311
Cdd:MTH00020 427 IYLTFLS---NTNLK 438
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
3.00e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 48.96 E-value: 3.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 59 YFLVQAAASTLMLFSSTINAW-HTGQWDIAQLTYPPAC-----LLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 133 IM-KLPPTTLLLITSHSLNP-----ILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLG--------WMMIIITYNP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 199 KLTLLT-------------FYTYILMTA-SIFLTMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 326 TLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260
....*....|....*....|....*...
gi 37780955 265 LIIQELIKQEMTTTTMI-ISMASLLGLF 291
Cdd:PRK08667 403 LLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
3.07e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.87 E-value: 3.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 34 EINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLTY--------PP---ACLLLTTAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNallvnptsPViygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 103 ATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLIT-----SHSLNPI---LLTTMSIMSVTLGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSaqgVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 175 TRKIMAFSSISHLGWMMIIITYNPKLT----LLTFYTYILMTASIFL-------TMNTTNISKLSTLMTSwtkTPMLNTT 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLgagivsyRTKTSNLRKLGGLLPV---MPVVAFM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 37780955 244 LMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-190 |
3.34e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 48.77 E-value: 3.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 20 TITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYF---------------LVQAAASTLM------LFSSTINA 78
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMgdgemaILWTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 79 wHTGQWDIAQLTYPPACLLLttAIATKLGLAPFHFWFPE-----------VLQGSSLTTAL---------LLSTIMKLPP 138
Cdd:PRK06458 204 -HASLLDPTLMKLAFVFLLI--GFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyavlryyilIDAAIGSDFP 280
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 37780955 139 TTLLLItshslnpillttMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWM 190
Cdd:PRK06458 281 GRLLLI------------FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-272 |
7.72e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 47.83 E-value: 7.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 91 YPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshSLNPIL---------LTTMSIMS 161
Cdd:PRK12646 209 FIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLF----RFTPLLglsnmyiyiVTFVGLIT 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 162 VTLGGWMGLNQTQTRKIMAFSSISHLGWMMIII------TYNPKLTLLTFYTYILMtASIFLTMN--------------- 220
Cdd:PRK12646 285 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMNhaifkcalfmgvgii 363
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 37780955 221 -----TTNISKLSTLMTSWtktPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK12646 364 dheagTRDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-296 |
8.49e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.42 E-value: 8.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 5 AKLILTLSILLGTtitITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW 84
Cdd:PRK12662 114 SAFLLCLGGLLGI---LVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 85 DIAQL-----------TYPPACLLLTTAIATKLGLAPFHFWFPEVLQG---------SSLTTALLLSTIMKLPPTTL--- 141
Cdd:PRK12662 191 NMGDMfliiqdlptnrAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDVFkan 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 142 LLITSHSLNPILLTtMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYI----LMTASIFL 217
Cdd:PRK12662 271 FVFTTLPFNNVFMI-LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFM 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 218 TM-------NTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGL 290
Cdd:PRK12662 350 VSgsisyhfGTTKLEDCLNL---WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSV 426
|
....*.
gi 37780955 291 FFYLRL 296
Cdd:PRK12662 427 IYVWKI 432
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
4.63e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.02 E-value: 4.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 55 AATKYFLVQAAASTLMLFSSTINAWHTGQ--WDIAQLT---YPPACLLLT-----TAIATKLGLAPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780955 124 LTTALLLSTIMKLPPTTL------LLITSHSLNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
103-268 |
6.47e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.56 E-value: 6.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 103 ATKLGLapfHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL-----LITSHSLNPILLTTMSIMSVTLGGWMGLNQTQTRK 177
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKK 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 178 IMAFSSISHLGWMMIIITY--NPKLTLLTFYTYILMTASIFL---------TMNTTNISKLSTLMTSwtkTPMLNTTLML 246
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLI 392
|
170 180
....*....|....*....|..
gi 37780955 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
1.00e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.92 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 55 AATKYFLVQAAASTLMLFSSTINAWHTG--QWDIAQL---TYPPAC-LLLTTAI----ATKLGLAPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTqLLLLAPIlvgfGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 124 LTTALLLSTIMKLPPTTLL------LITSHSLNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 198 PKLTLLT----FYTYILMTASIFLTM-------NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAavfqMISHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.57e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 43.40 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-TYPPACL-LLTTAIATKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLaTADPEAFaLIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 111 FHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPI--LLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 189 WMMIIITYNPKLTLltfyTYILMTASIFL---TMNTTNISKL-STLMTSWTKTPMLNTTLMLtllslAGLPPLTGFLPKW 264
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLcagALPSRNFTELiSQMLGIGKWIPLTMASFSI-----AGFPLLAGFVSKV 353
|
....*..
gi 37780955 265 LIIQELI 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
95-300 |
3.02e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 42.71 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 95 CLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPILLTTMSI-----MSVTLGGWMG 169
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLlllgsLTTLMASMSA 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 170 LNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYTYILMTASIFLT--------MNTTNISKLSTLmtsWTKTPML 240
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICagniihshGHSQDIRMVGNL---WYQMPIT 334
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 37780955 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASL-LGLFFYLRLAYCS 300
Cdd:MTH00209 335 SICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
69-300 |
5.80e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.48 E-value: 5.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 69 LMLFSSTINAWHTGQWDIAQLTYPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshS 148
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLI----R 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 149 LNPILLTTMSIMSVTL---------GGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYTYILMTASIFL- 217
Cdd:MTH00211 257 LSPLFQNNQLILGAVLllgaltmlfGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFFKAMLFMc 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 218 -------TMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIIS-MASLLG 289
Cdd:MTH00211 337 sgsiihgLNNEQDIRKMGGLSKN---LPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTlLATSLT 413
|
250
....*....|.
gi 37780955 290 LFFYLRLAYCS 300
Cdd:MTH00211 414 AAYSFRLIFLS 424
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-296 |
6.43e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 41.47 E-value: 6.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 58 KYFLVQAAASTL------MLFS--STINAWHTGQwDIAQLTYPPACLLLTTAI------ATKLGLAPFHFWFPEVLQG-- 121
Cdd:PRK07691 162 KYVLINVVSSAFfvvavaILYSvvGTLNMADISV-KIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYApp 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 122 ---SSLTTALL----LSTIMKLppTTLLLITSHSLNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK07691 241 iaiAALFGALLtkvgVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGV 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 195 TYNPKLTLL--TFYT--YILMTASIFLTM-------NTTNISKLSTLMTSWtktPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK07691 319 AMMTESGMIgaIYYLihDMIVKAALFLLIgimikitGTTDLKKMGGLIKRY---PVLGWMFFIAALSLAGIPPLSGFYGK 395
|
250 260 270
....*....|....*....|....*....|...
gi 37780955 264 WLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK07691 396 FFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
8.57e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.85 E-value: 8.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 96 LLLTTAI----ATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPIL-------LTTMSIMSVTL 164
Cdd:PRK07363 205 LILLTGLllgfGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTwslvapgLAIIGTISVIY 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 165 GGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLL----TFYTYILMTASIF-------LTMNTTNISKLSTLMTS 233
Cdd:PRK07363 285 GALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaQMISHGLILALLFhlvgiveRKVGTRDLDVLNGLMNP 364
|
170 180 190
....*....|....*....|....*....|....*
gi 37780955 234 WTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 365 IRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
14-192 |
1.60e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.07 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 14 LLGTTITITSNHWTT---AWAGLEI---NTLSIIPmisksHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIA 87
Cdd:PRK08168 110 LAAVHLLVLSDHLLVliaAWAAISLalhRLLCFYP-----DRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 88 QL-----TYPP------ACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTL-----LLITSHSLNP 151
Cdd:PRK08168 185 ALwahlaAQGAspslqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLirfapLLEQAPPARW 264
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 37780955 152 ILLtTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:PRK08168 265 LLV-LVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-296 |
1.63e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 40.32 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 53 IEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQL-----------TYPPACLLLTTAIATKLGLAPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 122 SSLTTALLLSTIMK-------LPPTTLLLITSHSLNPILLTTMSIMSVTLGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 195 TYNPKLTL--LTFY---TYILMTASIFLT---MNTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAGIngAIFYlvhDMVVKTALFLIAgslVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|
gi 37780955 267 IQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK12663 396 VQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.68e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 107 GLAPFHFWFPEVLQGSSLTTALLLSTI-MKLPPTTLLLITSHSLNP-----ILLTTMSIMSVTLGGWMGLNQTQTRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 181 FSSISHLGWMMI--------IITYNPKLTLLTFY--------------TYILMTASIFLTMNTTNISKLSTLmtsWTKTP 238
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVgglyhllnhslfksVLFLGAGSVWFRTGHRDIEKLGGI---GKKMP 351
|
170 180 190
....*....|....*....|....*....|....
gi 37780955 239 MLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-291 |
3.95e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.02 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 91 YPPACLLLTTAIATKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshSLNPIL---------LTTMSIMS 161
Cdd:PRK12648 206 YPPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLA----RLWPVLagteewfwiVGGAGLIT 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 162 VTLGGWMGLNQTQTRKIMAFSSISHLGwmmiIITynpklTLLTFYTYILMTASIFLTMN--------------------T 221
Cdd:PRK12648 282 LLLGAYFALFQHDLKGLLAYSTISHLG----LIT-----LLLGLGSPLAAVAAIFHIINhatfkaslfmaagiidhetgT 352
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780955 222 TNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTT--TMIISMASLLGLF 291
Cdd:PRK12648 353 RDMRRLSGL---RRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSldWLLPVAATLAGAF 421
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-227 |
7.74e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 37.98 E-value: 7.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 101 AIATKLGLAPFHFWFPEVLQGSSLTTALLLSTI-MKLPPTTLLLIT-------SHSLNPILLtTMSIMSVTLGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSwpilplgAQNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 37780955 173 TQTRKIMAFSSISHLGWMMIiitynpklTLLTfYTYILMTASIFLTMNTTNISKL 227
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSI--------TLVT-HDIIGLTGSIFIMLAHGIVSSL 363
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-268 |
8.59e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 38.03 E-value: 8.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 50 PRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIAQLT-----YPPAC-----LLLTTAIATKLGLAPFHFWFPEVL 119
Cdd:PRK12665 157 AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAvrldeLPSGTrtalfAVLLVAFGIKAAVFPLSFWLPDSY 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 120 -QGSSLTTALLLSTIMK-----LPPTTLLLITSHSLNPIL----LTTMSImsvtlgGWMG-LNQTQTRKIMAFSSISHLG 188
Cdd:PRK12665 237 pTAPAPVTAVFAGLLTKvgvyaIIRTHTLLFPGGGLDTLLmvvaLLTMVV------GILGaIAQSDIKRLLSFTLVSHIG 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 189 WMMIIITYNPKLTL--LTFYT--YILMTASIFLTMN-------TTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPL 257
Cdd:PRK12665 311 YMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGlierqagSSSLRRLGGLAKA---SPLLAVLFFVPALNLGGIPPF 387
|
250
....*....|.
gi 37780955 258 TGFLPKWLIIQ 268
Cdd:PRK12665 388 SGFIGKVALLE 398
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-281 |
9.76e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 37.85 E-value: 9.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 15 LGTTITITSNHWTTAWAGLEINTLS---IIPMISKSHHPRAIeaatkyFLVQAAASTLMLFSSTINAWH-TGQWDIAQLT 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 91 YPPACLLLTTAIATKLGLAPFHF--WFPEVLQGSSLTTALLLSTIMKL-------PPTTLLLITSHSLNPILLTTMSIMS 161
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLmgvygilKMTILTQTIPIGYFGLTILAIGAFS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780955 162 VTLGGWMGLNQTQTRKIMAFSSISHLGWMMI-----IITYNPKLTLLTFYTYILMTASI-------FLTMNTTNISKLST 229
Cdd:PRK06459 237 ILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFahsvaktGLFLSSGLQEKQSI 316
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 37780955 230 LMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMI 281
Cdd:PRK06459 317 TYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVI 368
|
|
| |
