|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
2-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 699.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00119 26 SNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00119 106 GSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00119 186 LPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVT 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00119 266 PPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVE 345
|
330 340 350
....*....|....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSIILILIPITSSLENKILN 355
Cdd:MTH00119 346 HPFIIIGQLASILYFTILLILFPLLGALENKMLN 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-350 |
6.87e-122 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 356.79 E-value: 6.87e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 3 NISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYYG 82
Cdd:COG1290 35 NWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYG 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 83 SYlyKE----TWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAL 158
Cdd:COG1290 115 AY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 159 H-FLLPFMITSLVLIHLTFLHESGSNNPLGI----PSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNllGDPENF 233
Cdd:COG1290 193 HvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNY 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 234 TPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFI 311
Cdd:COG1290 271 GPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIV 350
|
330 340 350
....*....|....*....|....*....|....*....
gi 37574950 312 LTWVGSQPVehPFITIGQLASLTYFSIILILIPITSSLE 350
Cdd:COG1290 351 LTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-183 |
7.04e-87 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 260.38 E-value: 7.04e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:cd00284 17 SNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSY--LYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH 159
Cdd:cd00284 97 GSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALH 176
|
170 180
....*....|....*....|....
gi 37574950 160 FLLPFMITSLVLIHLTFLHESGSN 183
Cdd:cd00284 177 FLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
2-181 |
2.49e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 233.04 E-value: 2.49e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:pfam00033 8 SNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYY 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 G--SYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH 159
Cdd:pfam00033 88 GgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLH 167
|
170 180
....*....|....*....|..
gi 37574950 160 FLLPFMITSLVLIHLTFLHESG 181
Cdd:pfam00033 168 FLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
219-273 |
3.40e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.49 E-value: 3.40e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 37574950 219 LTLFSPNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTA 273
Cdd:TIGR01156 54 LAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
2-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 699.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00119 26 SNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00119 106 GSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00119 186 LPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVT 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00119 266 PPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVE 345
|
330 340 350
....*....|....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSIILILIPITSSLENKILN 355
Cdd:MTH00119 346 HPFIIIGQLASILYFTILLILFPLLGALENKMLN 379
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
2-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 641.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00131 25 SNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00131 105 GSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFL 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00131 185 FPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVT 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00131 265 PPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVE 344
|
330 340 350
....*....|....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSIILILIPITSSLENKILN 355
Cdd:MTH00131 345 HPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
2-354 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 639.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00100 25 SNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00100 105 GSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFI 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00100 185 LPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNT 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00100 265 PPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVE 344
|
330 340 350
....*....|....*....|....*....|...
gi 37574950 322 HPFITIGQLASLTYFSIILILIPITSSLENKIL 354
Cdd:MTH00100 345 HPFIIIGQLASILYFLIILILMPIASLIENNLL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
2-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 614.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00074 26 SNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00074 106 GSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00074 186 LPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVT 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00074 266 PPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVE 345
|
330 340 350
....*....|....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSIILILIPITSSLENKILN 355
Cdd:MTH00074 346 DPFIEIGQAASILYFLLFIIIIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
2-345 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 589.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00191 22 SNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYY 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00191 102 GSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFL 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00191 182 LPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVT 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00191 262 PVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVE 341
|
330 340
....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSIILILIPI 345
Cdd:MTH00191 342 DPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
2-342 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 586.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00156 15 SNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYY 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00156 95 GSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00156 175 LPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVT 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00156 255 PVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVE 334
|
330 340
....*....|....*....|.
gi 37574950 322 HPFITIGQLASLTYFSIILIL 342
Cdd:MTH00156 335 EPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
2-354 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 564.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00145 26 VNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00145 106 GSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00145 186 LPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVT 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00145 266 PVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVE 345
|
330 340 350
....*....|....*....|....*....|...
gi 37574950 322 HPFITIGQLASLTYFSIILIlIPITSSLENKIL 354
Cdd:MTH00145 346 EPYETIGQVFTVLYFLFFLI-LPLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-355 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 557.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00034 25 SNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00034 105 GSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFL 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00034 185 FPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVT 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00034 265 PPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVE 344
|
330 340 350
....*....|....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSIILILIPITSSLENKILN 355
Cdd:MTH00034 345 YPFILLGQVASVLYFSLFLFFFPLISYLENKLIF 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
2-354 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 526.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00016 26 SNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00016 106 GSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00016 186 LPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVT 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00016 266 PTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVE 345
|
330 340 350
....*....|....*....|....*....|...
gi 37574950 322 HPFITIGQLASLTYFSiILILIPITSSLENKIL 354
Cdd:MTH00016 346 PPYEFLGQIFTVFYFF-YFMINPLLMKLWDKLL 377
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
2-355 |
1.84e-170 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 479.58 E-value: 1.84e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00022 24 SNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYY 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00022 104 GGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00022 184 FPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVT 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00022 264 PVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVE 343
|
330 340 350
....*....|....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSIILILIPITSSLENKILN 355
Cdd:MTH00022 344 EPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
2-355 |
1.35e-169 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 477.28 E-value: 1.35e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00053 26 SNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00053 106 GSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00053 186 LPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVT 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00053 266 PVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVE 345
|
330 340 350
....*....|....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSIILILIPITSSLENKILN 355
Cdd:MTH00053 346 EPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
2-355 |
3.68e-160 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 453.61 E-value: 3.68e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00224 26 NNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00224 106 GSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVT 241
Cdd:MTH00224 186 LPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVT 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 242 PPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQPVE 321
Cdd:MTH00224 266 PIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVE 345
|
330 340 350
....*....|....*....|....*....|....
gi 37574950 322 HPFITIGQLASLTYFSiILILIPITSSLENKILN 355
Cdd:MTH00224 346 DPFEGIGQVFTILYFS-YFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
2-351 |
4.42e-133 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 384.67 E-value: 4.42e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:MTH00033 22 SNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYY 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFL 161
Cdd:MTH00033 102 GGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYL 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 162 LPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFS--PNLLGDPENFTPANPL 239
Cdd:MTH00033 182 LPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPENFIQANPL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 240 VTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTWVGSQP 319
Cdd:MTH00033 262 VTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAP 341
|
330 340 350
....*....|....*....|....*....|...
gi 37574950 320 V-EHPFITIGQLASLTYFSIILILIPITSSLEN 351
Cdd:MTH00033 342 AgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-350 |
6.87e-122 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 356.79 E-value: 6.87e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 3 NISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYYG 82
Cdd:COG1290 35 NWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYG 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 83 SYlyKE----TWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAL 158
Cdd:COG1290 115 AY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 159 H-FLLPFMITSLVLIHLTFLHESGSNNPLGI----PSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNllGDPENF 233
Cdd:COG1290 193 HvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNY 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 234 TPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFI 311
Cdd:COG1290 271 GPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIV 350
|
330 340 350
....*....|....*....|....*....|....*....
gi 37574950 312 LTWVGSQPVehPFITIGQLASLTYFSIILILIPITSSLE 350
Cdd:COG1290 351 LTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
3-342 |
3.01e-117 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 343.46 E-value: 3.01e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 3 NISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYYG 82
Cdd:MTH00086 15 SLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMM 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 83 SYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLL 162
Cdd:MTH00086 95 SYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 163 PFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGfMIMFLSLSTLTLFSPNLLGDPENFTPANPLVTP 242
Cdd:MTH00086 175 PWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLGDPEMFIEADPMMSP 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 243 PHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSkqrTMTFRPISQLLFWALAANLFILTWVGSQPVEH 322
Cdd:MTH00086 254 VHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQCLVEY 330
|
330 340
....*....|....*....|
gi 37574950 323 PFITIGQLASLTYFSIILIL 342
Cdd:MTH00086 331 PFLFLSQIFSFIYFFLILLM 350
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-183 |
7.04e-87 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 260.38 E-value: 7.04e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:cd00284 17 SNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 GSY--LYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH 159
Cdd:cd00284 97 GSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALH 176
|
170 180
....*....|....*....|....
gi 37574950 160 FLLPFMITSLVLIHLTFLHESGSN 183
Cdd:cd00284 177 FLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
4-341 |
8.95e-85 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 260.69 E-value: 8.95e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 4 ISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYYGS 83
Cdd:MTH00046 18 LNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 84 YLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLP 163
Cdd:MTH00046 98 YSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 164 FMITSLVLIHLTFLHESGSNNPLGIPSN-CDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVTP 242
Cdd:MTH00046 178 FVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTP 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 243 PHIKPEWYFLFAYAILRSIPNKLGGvLALTASVLILLLSPLLHKSKqrtmTFRPISQLLFWALAANLFILTWVGSQPVEH 322
Cdd:MTH00046 258 VSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNGSS----VYSVWRQVNFWLIVSLFFSLSYLGGCHPEY 332
|
330
....*....|....*....
gi 37574950 323 PFITIGQLASLTYFSIILI 341
Cdd:MTH00046 333 PYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
2-181 |
2.49e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 233.04 E-value: 2.49e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 2 SNISAWWNFGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYY 81
Cdd:pfam00033 8 SNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYY 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 82 G--SYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH 159
Cdd:pfam00033 88 GgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLH 167
|
170 180
....*....|....*....|..
gi 37574950 160 FLLPFMITSLVLIHLTFLHESG 181
Cdd:pfam00033 168 FLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
184-331 |
1.21e-51 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 168.21 E-value: 1.21e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 184 NPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTLFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 263
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 37574950 264 KLGGVLALTASVLILLLSPLLHKSKQRTmTFRPISQLLFWALAANLFILTWVGSQPVEHPFITIGQLA 331
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
65-230 |
5.76e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 154.32 E-value: 5.76e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 65 SLFFICIYLHIARGLYYGSYLYKE--TWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAW 142
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 143 GGFSVDNPTLTRFFALHF-LLPFMITSLVLIHLTFLHESGSNNPLGIPSNCDKIPFHPYFSLKDLLGFMIMFLSLSTLTL 221
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 37574950 222 FSPNLLGDP 230
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
235-335 |
8.59e-41 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 138.77 E-value: 8.59e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 235 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTASVLILLLSPLLHKSKQRTMTFRPISQLLFWALAANLFILTW 314
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 37574950 315 VGSQPVEHPFITIGQLASLTY 335
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
10-186 |
6.08e-33 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 122.13 E-value: 6.08e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 10 FGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYYGSYLYKE- 88
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 89 -TWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMI 166
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 37574950 167 TSLVLIHLTFLHESGSNNPL 186
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
10-186 |
1.17e-29 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 113.28 E-value: 1.17e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 10 FGSLVGICLATQILTGLLLAAHYTADTSLAFSSVANTCRNVQYGWLIHNLHANGASLFFICIYLHIARGLYYGSYLYKE- 88
Cdd:CHL00070 36 LGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRe 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37574950 89 -TWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMI 166
Cdd:CHL00070 116 lTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLT 195
|
170 180
....*....|....*....|
gi 37574950 167 TSLVLIHLTFLHESGSNNPL 186
Cdd:CHL00070 196 AVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
219-273 |
4.02e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 55.01 E-value: 4.02e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 37574950 219 LTLFSPNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTA 273
Cdd:CHL00058 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMAS 103
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
219-273 |
5.27e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 54.80 E-value: 5.27e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 37574950 219 LTLFSPNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTA 273
Cdd:COG5679 55 LAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAA 104
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
219-273 |
3.40e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.49 E-value: 3.40e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 37574950 219 LTLFSPNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTA 273
Cdd:TIGR01156 54 LAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
|
|
| |
