|
Name |
Accession |
Description |
Interval |
E-value |
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
158-287 |
8.15e-37 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 142.02 E-value: 8.15e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 158 KDKVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTP 237
Cdd:COG0666 77 GADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTP 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 42767029 238 LHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 287
Cdd:COG0666 157 LHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAaenGHLEIVKLLLEAG 209
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
161-287 |
1.64e-36 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 141.24 E-value: 1.64e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHD 240
Cdd:COG0666 113 VNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHL 192
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 42767029 241 AANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 287
Cdd:COG0666 193 AAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAaenGNLEIVKLLLEAG 242
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
161-275 |
1.31e-28 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 118.13 E-value: 1.31e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHD 240
Cdd:COG0666 146 VNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDL 225
|
90 100 110
....*....|....*....|....*....|....*
gi 42767029 241 AANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVAN 275
Cdd:COG0666 226 AAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAA 260
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
158-287 |
1.01e-27 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 115.82 E-value: 1.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 158 KDKVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTP 237
Cdd:COG0666 44 LLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETP 123
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 42767029 238 LHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 287
Cdd:COG0666 124 LHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAaanGNLEIVKLLLEAG 176
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
172-264 |
2.88e-21 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 90.18 E-value: 2.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 172 LHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLA-AGAEVNTKGlddDTPLHDAANNGHYKVV 250
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEhADVNLKDNG---RTALHYAARSGHLEIV 77
|
90
....*....|....
gi 42767029 251 KLLLRYGGNPQQSN 264
Cdd:pfam12796 78 KLLLEKGADINVKD 91
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
161-271 |
5.43e-19 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 90.01 E-value: 5.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHD 240
Cdd:COG0666 179 VNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLL 258
|
90 100 110
....*....|....*....|....*....|.
gi 42767029 241 AANNGHYKVVKLLLRYGGNPQQSNRKGETPL 271
Cdd:COG0666 259 AAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
160-274 |
1.14e-17 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 88.48 E-value: 1.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 160 KVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLH 239
Cdd:PHA02874 116 DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLH 195
|
90 100 110
....*....|....*....|....*....|....*
gi 42767029 240 DAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA 274
Cdd:PHA02874 196 NAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNA 230
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
205-287 |
6.34e-16 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 75.15 E-value: 6.34e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 205 LHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYggNPQQSNRKGETPLKVA---NSPTMVN 281
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH--ADVNLKDNGRTALHYAarsGHLEIVK 78
|
....*.
gi 42767029 282 LLLGKG 287
Cdd:pfam12796 79 LLLEKG 84
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
694-1308 |
1.95e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 83.65 E-value: 1.95e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 694 FKKEEKLSKMKLEEKEwlfKDEKSLKRIKDTNKDISRSFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKSkDRP 773
Cdd:PTZ00121 1208 AEEERKAEEARKAEDA---KKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKA-DEL 1283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 774 SKLEKKNDLKEDKISKEKEKIFKEDKEKLKKEKVYREDSAFDEYCNKNQFLENEDTKFSLSDDQRDRWFSDLSDSSFDFK 853
Cdd:PTZ00121 1284 KKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAE 1363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 854 GEDSWDSPVTDYRDMKSDSVAKLILETVKEDSKERRRDSRAREKRDYREPFFRKKDRDYLDKNSE-KRKEQTEKHKSVPG 932
Cdd:PTZ00121 1364 EKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEeKKKADEAKKKAEEA 1443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 933 YLSEKDKKRRESAEAGRDRKDALESCKERRDGRAKPEEVHR-EELKECGCESgfKDKSDgDFGKGLEPWERHHPAREKEK 1011
Cdd:PTZ00121 1444 KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKaDEAKKKAEEA--KKKAD-EAKKAAEAKKKADEAKKAEE 1520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1012 KdgpdKERKEKTKPERYKEKSSDKDKSEKSILEKCQKDKEFDKCFKEKKDTKEKHKDTHGKDKERKAS-LDQGKEKKEKA 1090
Cdd:PTZ00121 1521 A----KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEeAKKAEEARIEE 1596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1091 FPGIISEDFSEKKDDKKGKEKSWYIADIFTDESEDDRDScmgSGFKMGEASDLPRTDGLQEKEEGREAYASDRHRKSSDK 1170
Cdd:PTZ00121 1597 VMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKV---EQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEED 1673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1171 QHPERQKDKEPRDRRKDRGAADAGRDKKEKVfekhKEKKDKESTEKYKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAED 1250
Cdd:PTZ00121 1674 KKKAEEAKKAEEDEKKAAEALKKEAEEAKKA----EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEA 1749
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 42767029 1251 KAKSKHKEKSDKEHSKERKSSRSADAEKSLLEKLEEEALHEYREDSNDKISEVSSDSF 1308
Cdd:PTZ00121 1750 KKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNF 1807
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
158-287 |
6.34e-15 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 78.07 E-value: 6.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 158 KDKVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTP 237
Cdd:COG0666 11 LLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTL 90
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 42767029 238 LHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 287
Cdd:COG0666 91 LHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAaynGNLEIVKLLLEAG 143
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
161-287 |
4.00e-14 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 77.76 E-value: 4.00e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLH---RAAIRGDARRIKELISEGADVNVKDFAGWTALH-EACNRGYYDVAKQLLAAGAEVNTKGLDDDT 236
Cdd:PHA03095 40 VNFRGEYGKTPLHlylHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHlYLYNATTLDVIKLLIKAGADVNAKDKVGRT 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 42767029 237 PLHD-AAN-NGHYKVVKLLLRYGGNPQQSNRKGETPLKV----AN-SPTMVNLLLGKG 287
Cdd:PHA03095 120 PLHVyLSGfNINPKVIRLLLRKGADVNALDLYGMTPLAVllksRNaNVELLRLLIDAG 177
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1691-2354 |
6.44e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 78.44 E-value: 6.44e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1691 ASPRPDQSRPTGVPTPTSVLSCPSYEEVmhTPRT-------PSCSADDYADLVFDCA-DSQHSTPVPTAPTSACSPsffd 1762
Cdd:PHA03247 2502 GPPDPDAPPAPSRLAPAILPDEPVGEPV--HPRMltwirglEELASDDAGDPPPPLPpAAPPAAPDRSVPPPRPAP---- 2575
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1763 RFSVASSGLSENASQAPARPLSTnlyrsvsvdirRTPeeefsVGDKlfrqqSVPAASSYDSPMPPsmEDRAPLPPVPAEK 1842
Cdd:PHA03247 2576 RPSEPAVTSRARRPDAPPQSARP-----------RAP-----VDDR-----GDPRGPAPPSPLPP--DTHAPDPPPPSPS 2632
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1843 FACLSPGYYSPDYGLPSPKVDALHCPPAAVVTVTPSPEGVFSSLQAKPS-PSPRAellVPSLEGALPpDLDTSEDQQATA 1921
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQrPRRRA---ARPTVGSLT-SLADPPPPPPTP 2708
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1922 AIIPPEPSYLEPLDEGPFSAVITEEPVEWAHPSEQALASSLIGGTSENPVSWPVGSDLLLKSPQRFPES-PKRFCPADPL 2000
Cdd:PHA03247 2709 EPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAgPPRRLTRPAV 2788
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2001 HSAAPgpfsASEAPYPAPPASPAPYALPVAEPGLEDVKDGVDAVPAAISTSEAAPYAPPSGLESFFSNCKSLpeAPL-DV 2079
Cdd:PHA03247 2789 ASLSE----SRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV--APGgDV 2862
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2080 APEPACVAAVAQVEAlgplensfldgsrglshlgqvEPVPWADAFAGPEDDLDLGPFSLPELPLQTKDAADGEAEPVEES 2159
Cdd:PHA03247 2863 RRRPPSRSPAAKPAA---------------------PARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQP 2921
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2160 LAPPEEMPPGAPgvinggdvstvvaeEPPALPPDQASTRLPAELEPEPSGEPKlDVALEAAVEAEtVPEERARGDPDSSV 2239
Cdd:PHA03247 2922 QPPPPPQPQPPP--------------PPPPRPQPPLAPTTDPAGAGEPSGAVP-QPWLGALVPGR-VAVPRFRVPQPAPS 2985
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2240 EPAPVPPEQRPLGSGDQGAEAEgppAASLCAPDGPAPNTVAQAQAADgagPEDDTEASRAAAPAEGPPGGIQPEAAEPKP 2319
Cdd:PHA03247 2986 REAPASSTPPLTGHSLSRVSSW---ASSLALHEETDPPPVSLKQTLW---PPDDTEDSDADSLFDSDSERSDLEALDPLP 3059
|
650 660 670
....*....|....*....|....*....|....*
gi 42767029 2320 taEAPKAPRVEEiPQRMTRNRAQMLANQSKQGPPP 2354
Cdd:PHA03247 3060 --PEPHDPFAHE-PDPATPEAGARESPSSQFGPPP 3091
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
180-288 |
1.04e-12 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 73.38 E-value: 1.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 180 DARRIKELISEGADVNVKD-FAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGG 258
Cdd:PHA02878 146 EAEITKLLLSYGADINMKDrHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGA 225
|
90 100 110
....*....|....*....|....*....|....
gi 42767029 259 NPQQSNRKGETPLKVANSP----TMVNLLLGKGT 288
Cdd:PHA02878 226 STDARDKCGNTPLHISVGYckdyDILKLLLEHGV 259
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
161-230 |
3.04e-12 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 64.75 E-value: 3.04e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDARRIKELISEgADVNVKDFaGWTALHEACNRGYYDVAKQLLAAGAEVNTK 230
Cdd:pfam12796 23 ANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKDN-GRTALHYAARSGHLEIVKLLLEKGADINVK 90
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
161-287 |
3.13e-12 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 71.23 E-value: 3.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIR--GDARRIKELISEGADVNVKDFAGWTALHEA--CNRGYYDVAKQLLAAGAEVN-------- 228
Cdd:PHA03100 99 VNAPDNNGITPLLYAISKksNSYSIVEYLLDNGANVNIKNSDGENLLHLYleSNKIDLKILKLLIDKGVDINaknrvnyl 178
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 229 -TKGLDDD-------TPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 287
Cdd:PHA03100 179 lSYGVPINikdvygfTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAilnNNKEIFKLLLNNG 248
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
130-287 |
3.77e-12 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 72.02 E-value: 3.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 130 NSPVDTTPKHPSQSTVCQKGTPNSASktkdkVNKRNERGETRLHRAAIRG-DARRIKELISEGADVNVKDFAGWTALHEA 208
Cdd:PHA02876 274 NTPLHHASQAPSLSRLVPKLLERGAD-----VNAKNIKGETPLYLMAKNGyDTENIRTLIMLGADVNAADRLYITPLHQA 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 209 CNRGYY-DVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA----NSPTMVNLL 283
Cdd:PHA02876 349 STLDRNkDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFAlcgtNPYMSVKTL 428
|
....
gi 42767029 284 LGKG 287
Cdd:PHA02876 429 IDRG 432
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1796-2354 |
8.09e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 71.51 E-value: 8.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1796 RRTPEEEFSVGDKLFRQQSVPAASSYDSPMPPSMEDRAPLP------PVPAEKFACLS--PGYYSPDYGLPSPKVDALHC 1867
Cdd:PHA03247 2481 RRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPdepvgePVHPRMLTWIRglEELASDDAGDPPPPLPPAAP 2560
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1868 PPAAVVTVTPS------PEGVFSSLQAKPSPSP-----------RAELLVPSLEGALPPDlDTSEDQQATAaiipPEPSY 1930
Cdd:PHA03247 2561 PAAPDRSVPPPrpaprpSEPAVTSRARRPDAPPqsarprapvddRGDPRGPAPPSPLPPD-THAPDPPPPS----PSPAA 2635
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1931 LEPLDEGPFSAVITEEPVEWAHPSE-----QALASSLIGGTSENPVSW-------PVGSDLLLKSPQRFPESPKRfcPAD 1998
Cdd:PHA03247 2636 NEPDPHPPPTVPPPERPRDDPAPGRvsrprRARRLGRAAQASSPPQRPrrraarpTVGSLTSLADPPPPPPTPEP--APH 2713
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1999 PLHSAAPGPFSASEAPYPAPPASPAPYALPVAEPGLEDVKDGVDAVPAAIST--SEAAPYAPPSGlesffsnckslpeaP 2076
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGppAPAPPAAPAAG--------------P 2779
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2077 LDVAPEPACVAAVAQVEALgPLENSFLDGSRGLShlgqvEPVPWADAFAGPEDDLDLGPFSLPELPLQTKdaadgeaEPV 2156
Cdd:PHA03247 2780 PRRLTRPAVASLSESRESL-PSPWDPADPPAAVL-----APAAALPPAASPAGPLPPPTSAQPTAPPPPP-------GPP 2846
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2157 EESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPD 2236
Cdd:PHA03247 2847 PPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPP 2926
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2237 SSVEPAPVPPEQRPlgsgdqgaeaegPPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPggiQPEAAE 2316
Cdd:PHA03247 2927 PQPQPPPPPPPRPQ------------PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPS---REAPAS 2991
|
570 580 590
....*....|....*....|....*....|....*...
gi 42767029 2317 PKPTAEAPKAPRVEeipqrmtrNRAQMLANQSKQGPPP 2354
Cdd:PHA03247 2992 STPPLTGHSLSRVS--------SWASSLALHEETDPPP 3021
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2148-2392 |
3.10e-11 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 69.11 E-value: 3.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2148 AADGEAEPVEESLAP-PEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKldvaleaAVEAETV 2226
Cdd:PRK07003 367 APGGGVPARVAGAVPaPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAP-------PATADRG 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2227 PEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASlcAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGP 2306
Cdd:PRK07003 440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAP--ASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2307 PGGIQPEAAEPKPTAeAPKAPRVEEIPQRMT-------------------RNRAQMLANQSKQGPPPSEKECAPTPA--- 2364
Cdd:PRK07003 518 REDAPAAAAPPAPEA-RPPTPAAAAPAARAGgaaaaldvlrnagmrvssdRGARAAAAAKPAAAPAAAPKPAAPRVAvqv 596
|
250 260
....*....|....*....|....*...
gi 42767029 2365 PVTRAKARGSEDDDAQAQHPRKRRFQRS 2392
Cdd:PRK07003 597 PTPRARAATGDAPPNGAARAEQAAESRG 624
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
106-287 |
3.77e-11 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 68.94 E-value: 3.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 106 RAGYplsERQQVALLMQMTAEESANSPVDTTPKHPSQSTVCQKGTPNSASKTKDKVNKRNERGETRLHRAAIRGDARRIK 185
Cdd:PHA02876 316 KNGY---DTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIIN 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 186 ELISEGADVNVKDFAGWTALHEA-CNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAA-NNGHYKVVKLLLRYGGNPQQS 263
Cdd:PHA02876 393 TLLDYGADIEALSQKIGTALHFAlCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACkKNCKLDVIEMLLDNGADVNAI 472
|
170 180
....*....|....*....|....*
gi 42767029 264 NRKGETPLKVA-NSPTMVNLLLGKG 287
Cdd:PHA02876 473 NIQNQYPLLIAlEYHGIVNILLHYG 497
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
183-259 |
4.41e-11 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 67.77 E-value: 4.41e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42767029 183 RIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGN 259
Cdd:PHA03100 174 RVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 250
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
180-287 |
5.66e-11 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 67.74 E-value: 5.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 180 DARRIKELISEGADVNVKDFAGWTALHEACNRG---YYDVAKQLLAAGAEVNTKGLDDDTPLHD-AANNGHYKVVKLLLR 255
Cdd:PHA03095 26 TVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSsekVKDIVRLLLEAGADVNAPERCGFTPLHLyLYNATTLDVIKLLIK 105
|
90 100 110
....*....|....*....|....*....|....*..
gi 42767029 256 YGGNPQQSNRKGETPLKV-----ANSPTMVNLLLGKG 287
Cdd:PHA03095 106 AGADVNAKDKVGRTPLHVylsgfNINPKVIRLLLRKG 142
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1896-2384 |
5.81e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 68.81 E-value: 5.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1896 AELLVPSLEGALP-PDLDTSEDQQAtaaiiPPEPSYLEPldegpfsAVITEEPV-EWAHPSEQALASSLiggtsENPVSW 1973
Cdd:PHA03247 2484 AEARFPFAAGAAPdPGGGGPPDPDA-----PPAPSRLAP-------AILPDEPVgEPVHPRMLTWIRGL-----EELASD 2546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1974 PVGSDLLLKSPQRFPESPKRFCPADPLHSAAPGPFSASEAPYPAPPASPAPYALPVAEPGledvKDGVDAVPAAISTSEA 2053
Cdd:PHA03247 2547 DAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRG----DPRGPAPPSPLPPDTH 2622
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2054 APYAPPSGLESFFSNCKSLPEAPLDVAPEPACVAAVAQV--------EALGPLENSFLDGSRGLSHLGQVEPVP-WADAF 2124
Cdd:PHA03247 2623 APDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrprrarrLGRAAQASSPPQRPRRRAARPTVGSLTsLADPP 2702
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2125 AGPEDDLDLGPFSLPELPLQTKDAADGEAEPVeeslAPPEEMPPGAP-GVINGGDVSTVVAEEPPALPPDQASTRLPAEl 2203
Cdd:PHA03247 2703 PPPPTPEPAPHALVSATPLPPGPAAARQASPA----LPAAPAPPAVPaGPATPGGPARPARPPTTAGPPAPAPPAAPAA- 2777
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2204 EPEPSGEPKLDVALEAAVEAETVPeerargdPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASLCAPDGPAPntvaqaq 2283
Cdd:PHA03247 2778 GPPRRLTRPAVASLSESRESLPSP-------WDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP------- 2843
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2284 aadgAGPEDDTEASRAAAPaeGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQ----RMTRNRAQMLANQSKQGPPPSEKEC 2359
Cdd:PHA03247 2844 ----GPPPPSLPLGGSVAP--GGDVRRRPPSRSPAAKPAAPARPPVRRLARpavsRSTESFALPPDQPERPPQPQAPPPP 2917
|
490 500
....*....|....*....|....*
gi 42767029 2360 APTPAPVTRAKARGSEDDDAQAQHP 2384
Cdd:PHA03247 2918 QPQPQPPPPPQPQPPPPPPPRPQPP 2942
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
176-256 |
5.57e-10 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 64.92 E-value: 5.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 176 AIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLR 255
Cdd:PTZ00322 90 AASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSR 169
|
.
gi 42767029 256 Y 256
Cdd:PTZ00322 170 H 170
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
161-287 |
1.08e-09 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 63.75 E-value: 1.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNE-RGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLH 239
Cdd:PHA02878 160 INMKDRhKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLH 239
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 42767029 240 DAANN-GHYKVVKLLLRYGGNPQ-QSNRKGETPLKVA-NSPTMVNLLLGKG 287
Cdd:PHA02878 240 ISVGYcKDYDILKLLLEHGVDVNaKSYILGLTALHSSiKSERKLKLLLEYG 290
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2161-2363 |
3.57e-09 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 62.56 E-value: 3.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2161 APPEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVE 2240
Cdd:PRK07003 420 ATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAP 499
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2241 PAPVPPEQrplgsgdqgAEAEGPPAASlcAPDGPAPNTvAQAQAADGAGPEDDTEASRA--AAPA--------------E 2304
Cdd:PRK07003 500 SAATPAAV---------PDARAPAAAS--REDAPAAAA-PPAPEARPPTPAAAAPAARAggAAAAldvlrnagmrvssdR 567
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42767029 2305 GPPGGIQPEAAEPKPTAEAPKAPRVE-EIPQ-RMTRNRAQMLANQSKQGPPPSEKECAPTP 2363
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPKPAAPRVAvQVPTpRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
676-1548 |
3.97e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.85 E-value: 3.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 676 NDLSTENKLKVLKHDRDHFKKEEKLskmKLEEKEWLFKDEKSLKRIKDTNKDISRSFREEKDRSNKAEKERSLKEKSPKE 755
Cdd:PTZ00121 1048 IDEDIDGNHEGKAEAKAHVGQDEGL---KPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKA 1124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 756 EKLRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKEKVYREDSAFDEYCNKNQFLENEDTKFSLSD 835
Cdd:PTZ00121 1125 EDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEA 1204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 836 DQRDRWFSDLSDSSfdfKGEDSwdspvtdyrdMKSDSVAKLilETVKEDSKERRRDSRAREKRDYRE----PFFRKKDRD 911
Cdd:PTZ00121 1205 ARKAEEERKAEEAR---KAEDA----------KKAEAVKKA--EEAKKDAEEAKKAEEERNNEEIRKfeeaRMAHFARRQ 1269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 912 YLDKNSEKRKEQT-----EKHKSVPGYLSEKDKKRRESAEAGRDRKDALESCKERRDGRAKPEEVHR--EELKECGCESG 984
Cdd:PTZ00121 1270 AAIKAEEARKADElkkaeEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKkaEEAKKAAEAAK 1349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 985 FKDKSDGDFGKglepwerhhpAREKEKKDGPDKERKEKTKPERYKEKSSDKDKSEKsILEKCQKDKEFDKCFKEKKDTKE 1064
Cdd:PTZ00121 1350 AEAEAAADEAE----------AAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE-AKKKAEEDKKKADELKKAAAAKK 1418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1065 KHKDTHGKDKERKASlDQGKEKKEKAFPgiisedfsekkddkkgkekswyiADIFTDESEDDRdscmgsgfkmgEASDLP 1144
Cdd:PTZ00121 1419 KADEAKKKAEEKKKA-DEAKKKAEEAKK-----------------------ADEAKKKAEEAK-----------KAEEAK 1463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1145 RtdglqEKEEGREAyaSDRHRKSSDKQHPERQKDKEPRDRRKDRGAADAGRDKKEKVFEKHKEKKDKESTEKYKDRKDRA 1224
Cdd:PTZ00121 1464 K-----KAEEAKKA--DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA 1536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1225 SVDSTQDKKNKQKLPEKAEKKHAAEDKAKSkhkEKSDKEHSKERKSSRSADAEKSLLEKLEEEALHEYREDSNDKISEVS 1304
Cdd:PTZ00121 1537 DEAKKAEEKKKADELKKAEELKKAEEKKKA---EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAK 1613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1305 SDSfTDRGQEPGLTAFLEVSFTEPPGDDKPRESACLPEKLKEKERHRHSSSSSKKSHDRERAKKEKAEKKEKGEDYKEGG 1384
Cdd:PTZ00121 1614 KAE-EAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE 1692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1385 SRKDSGQYEKDFLEadaygvsynMKADIEDELDKTIELFSTEKKDKNDSErEPSKKIEKELKPygSSAINILKEKKKREK 1464
Cdd:PTZ00121 1693 ALKKEAEEAKKAEE---------LKKKEAEEKKKAEELKKAEEENKIKAE-EAKKEAEEDKKK--AEEAKKDEEEKKKIA 1760
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1465 HREKWRDEKERHRDRHADGLLRHHRDELLRHHRDEQKPATRDKDSPPRVLKDKSRDEGPRLGDAKLKEkfkDGAEKEKGD 1544
Cdd:PTZ00121 1761 HLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEME---DSAIKEVAD 1837
|
....
gi 42767029 1545 PVKM 1548
Cdd:PTZ00121 1838 SKNM 1841
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
201-254 |
5.17e-09 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 54.20 E-value: 5.17e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 42767029 201 GWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLL 254
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
160-274 |
1.59e-08 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 59.89 E-value: 1.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 160 KVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGY-YDVAKQLLAAGAEVNTK----GLdd 234
Cdd:PHA02878 193 NVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKdYDILKLLLEHGVDVNAKsyilGL-- 270
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 42767029 235 dTPLHDAANNGhyKVVKLLLRYGGNPQQSNRKGETPLKVA 274
Cdd:PHA02878 271 -TALHSSIKSE--RKLKLLLEYGADINSLNSYKLTPLSSA 307
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
184-271 |
1.76e-08 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 59.59 E-value: 1.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 184 IKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQS 263
Cdd:PHA02874 107 IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK 186
|
....*...
gi 42767029 264 NRKGETPL 271
Cdd:PHA02874 187 DNNGESPL 194
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
217-285 |
2.26e-08 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 59.91 E-value: 2.26e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 42767029 217 AKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLG 285
Cdd:PTZ00322 98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAeenGFREVVQLLSR 169
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2151-2371 |
4.95e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.73 E-value: 4.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2151 GEAEPVEESLAPPEEMPPGAPgvinggdVSTVVAEEPPALPPDQASTRLPAELEPEPSGEP-KLDVALEAAVEAETVPEE 2229
Cdd:PRK12323 370 GGAGPATAAAAPVAQPAPAAA-------APAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPaRRSPAPEALAAARQASAR 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2230 RARGDPDSSVEPAPVP-PEQRPlgsgdQGAEAEGPPAASLCAPDGPAPntvaqaqaadgagpeddtEASRAAAPAEGPPG 2308
Cdd:PRK12323 443 GPGGAPAPAPAPAAAPaAAARP-----AAAGPRPVAAAAAAAPARAAP------------------AAAPAPADDDPPPW 499
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 42767029 2309 GIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKA 2371
Cdd:PRK12323 500 EELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVA 562
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
161-274 |
1.22e-07 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 56.90 E-value: 1.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEAC--NRGyydvAKQLLAAGAEVNTKGLDDDTPL 238
Cdd:PHA02874 183 ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIihNRS----AIELLINNASINDQDIDGSTPL 258
|
90 100 110
....*....|....*....|....*....|....*..
gi 42767029 239 HDAANNGHYK-VVKLLLRYGGNPQQSNRKGETPLKVA 274
Cdd:PHA02874 259 HHAINPPCDIdIIDILLYHKADISIKDNKGENPIDTA 295
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
170-221 |
1.50e-07 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 49.97 E-value: 1.50e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 42767029 170 TRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLL 221
Cdd:pfam13637 3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
161-260 |
2.57e-07 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 55.80 E-value: 2.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDARR-IKELISEGADVNVKDFAGWTALHeACNRGY---YDVAKQLLAAGAEVNTKGLDDDT 236
Cdd:PHA03095 76 VNAPERCGFTPLHLYLYNATTLDvIKLLIKAGADVNAKDKVGRTPLH-VYLSGFninPKVIRLLLRKGADVNALDLYGMT 154
|
90 100
....*....|....*....|....*.
gi 42767029 237 PLHD--AANNGHYKVVKLLLRYGGNP 260
Cdd:PHA03095 155 PLAVllKSRNANVELLRLLIDAGADV 180
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2148-2388 |
5.06e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.38 E-value: 5.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2148 AADGEAEPVEESLAPPEEMP-PGAPGvinggdvstvvAEEPPALPPDQASTRLPAELEPEPSGEPKldvALEAAVEAETV 2226
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAArPAAPA-----------APAAPAAPAPAGAAAAPAEASAAPAPGVA---APEHHPKHVAV 659
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2227 PEERARGD--PDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASlcapdgPAPNTVAQAQAADGAGPEDDTEASRAAAPAE 2304
Cdd:PRK07764 660 PDASDGGDgwPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPA------PAPAATPPAGQADDPAAQPPQAAQGASAPSP 733
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2305 GPPGGIqPEAAEPKPTAEAPKAPRVEEIPQrmtrnraqmlanqskqgPPPSEKECAPTPAPVTRAKARGSEDDDAQAQHP 2384
Cdd:PRK07764 734 AADDPV-PLPPEPDDPPDPAGAPAQPPPPP-----------------APAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDD 795
|
....
gi 42767029 2385 RKRR 2388
Cdd:PRK07764 796 EDRR 799
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
647-1273 |
6.97e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.98 E-value: 6.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 647 SISQELKLKSFTYEYEDSKQkSDKAILLENDLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKD--EKSLKRIKDT 724
Cdd:pfam02463 163 AGSRLKRKKKEALKKLIEET-ENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLdyLKLNEERIDL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 725 NKDISRSFREEKDRSNK------AEKERSLKEKSPKEEKLRLYKEERKKKSKDRPSKLEKKNDLKEDKISK-------EK 791
Cdd:pfam02463 242 LQELLRDEQEEIESSKQeiekeeEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDeeklkesEK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 792 EKIFKEDKEKLKKEKVYREDSAFDE-------YCNKNQFLENEDTKFSLSDDQRDRWFSDLSDssfDFKGEDSWDSPVTD 864
Cdd:pfam02463 322 EKKKAEKELKKEKEEIEELEKELKEleikreaEEEEEEELEKLQEKLEQLEEELLAKKKLESE---RLSSAAKLKEEELE 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 865 YRDMKSDSVAKLI-LETVKEDSKERRRDSRAREKRDYREPFFRKKDRDYLDKNSEKRKEQTEKHKSVPGYLSEKDKKRRE 943
Cdd:pfam02463 399 LKSEEEKEAQLLLeLARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQ 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 944 SAEAGRDRKDALESCKERRDGRAKPEEVHREELKECGCESGFKDKSDGDFGKGlepwERHHPAREKEKKDGPDKERKEKT 1023
Cdd:pfam02463 479 LVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRL----GDLGVAVENYKVAISTAVIVEVS 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1024 KPERYKEKSSDKDKSEKSILEKCQKDKEFDKCFK--EKKDTKEKHKDTHGKDKERKASLD-QGKEKKEKAFPGIISEDFS 1100
Cdd:pfam02463 555 ATADEVEERQKLVRALTELPLGARKLRLLIPKLKlpLKSIAVLEIDPILNLAQLDKATLEaDEDDKRAKVVEGILKDTEL 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1101 EKKDDKKGKEKSWYIADIFTDESEDDRDSCMGSGFKMgeASDLPRTDGLQEKEEGREAYASDRHRKSSDKQHPERQKDKE 1180
Cdd:pfam02463 635 TKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSEL--TKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEEL 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1181 PRDrrkdrgaadagRDKKEKVFEKHKEKKDKESTEKYKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAEDKAKSKHKEKS 1260
Cdd:pfam02463 713 KKL-----------KLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEERE 781
|
650
....*....|...
gi 42767029 1261 DKEHSKERKSSRS 1273
Cdd:pfam02463 782 KTEKLKVEEEKEE 794
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
184-287 |
7.75e-07 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 54.29 E-value: 7.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 184 IKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHY-----KVVKLLLRYGG 258
Cdd:PHA03100 18 IKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNltdvkEIVKLLLEYGA 97
|
90 100 110
....*....|....*....|....*....|....
gi 42767029 259 NPQQSNRKGETPLKVA-----NSPTMVNLLLGKG 287
Cdd:PHA03100 98 NVNAPDNNGITPLLYAiskksNSYSIVEYLLDNG 131
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1902-2278 |
8.33e-07 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 54.58 E-value: 8.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1902 SLEGALPPDLDTSEDQQATAAIIPPEPSylePLDEGPFSAVITEEPVEWAHPSEQALAS--SLIGGTSENPVSwpvgsdl 1979
Cdd:pfam17823 43 SGDAVPRADNKSSEQ*NFCAATAAPAPV---TLTKGTSAAHLNSTEVTAEHTPHGTDLSepATREGAADGAAS------- 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1980 llkspqRFPESPKRFCP---ADPLHSAAPGPFSaseapypappaspapyaLPVAEPGLEDVKDGVDAVPAAISTSEAAPY 2056
Cdd:pfam17823 113 ------RALAAAASSSPssaAQSLPAAIAALPS-----------------EAFSAPRAAACRANASAAPRAAIAAASAPH 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2057 -APPSGLESFFSNCKSLPEAPLDVAPEPACVAAVAQVEALGPLENSFL-----DGSRGLSHLGQVEPVP-WADAFAGPED 2129
Cdd:pfam17823 170 aASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATatghpAAGTALAAVGNSSPAAgTVTAAVGTVT 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2130 DLDLGPFSLPELPLQTKDAADGEAEPVEESLAPPEEMP-------PGAP-GVINGGDVSTVVAEEP-----PALPPDQAS 2196
Cdd:pfam17823 250 PAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPsdtmarnPAAPmGAQAQGPIIQVSTDQPvhntaGEPTPSPSN 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2197 TRLPAElEPEPSGEPKLDVALEAAVE-----AETVPEERARGDPD-----SSVEPAPVPPEQRPLGSGD-QGAEAEGPPA 2265
Cdd:pfam17823 330 TTLEPN-TPKSVASTNLAVVTTTKAQakepsASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGIlLAPEQVATEA 408
|
410
....*....|...
gi 42767029 2266 ASLCAPDGPAPNT 2278
Cdd:pfam17823 409 TAGTASAGPTPRS 421
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
220-274 |
1.26e-06 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 47.34 E-value: 1.26e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 42767029 220 LLAAG-AEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA 274
Cdd:pfam13857 1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
175-287 |
1.67e-06 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 53.72 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 175 AAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKV----- 249
Cdd:PLN03192 532 VASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIfrily 611
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42767029 250 --------------------------VKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 287
Cdd:PLN03192 612 hfasisdphaagdllctaakrndltaMKELLKQGLNVDSEDHQGATALQVAmaeDHVDMVRLLIMNG 678
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2123-2340 |
1.70e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 53.73 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2123 AFAGPEDDLDLGPFSLPELPL-QTKDAADGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPA 2201
Cdd:PRK12323 362 AFRPGQSGGGAGPATAAAAPVaQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASA 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2202 ELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRplgsgdqGAEAEGPPAASLCAPDGPAPNTVAQ 2281
Cdd:PRK12323 442 RGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAP-------APADDDPPPWEELPPEFASPAPAQP 514
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 42767029 2282 AQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAePKPTAEAPKAPRVEEIPQRMTRNR 2340
Cdd:PRK12323 515 DAAPAGWVAESIPDPATADPDDAFETLAPAPAAA-PAPRAAAATEPVVAPRPPRASASG 572
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1626-2244 |
2.03e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.79 E-value: 2.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1626 PADDGRKKGLDIPAK----KPPGlDPPFKDKKLKESTPIPPAAENKLHPASGADSKDWLAGPHMKEVLPASPRPDQ-SRP 1700
Cdd:PHA03247 2580 PAVTSRARRPDAPPQsarpRAPV-DDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDdPAP 2658
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1701 TGVPTPTSVLSCPSYEEVMHTPRTPS-CSADDYADLVFDCADSQHSTPVPTAPTSACSPSFFDRFSVASSGLSENASQAP 1779
Cdd:PHA03247 2659 GRVSRPRRARRLGRAAQASSPPQRPRrRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA 2738
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1780 ARPLSTNLYRSVSVDIRRTPeeefsvgdklfrqqSVPAASSYDSPMPPSMEDRAPLPPVPAEKFACLSPGYYSpdygLPS 1859
Cdd:PHA03247 2739 PAPPAVPAGPATPGGPARPA--------------RPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRES----LPS 2800
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1860 PKVDAlhcPPAAVVTvTPSPEGVFSSLQAKPSPSPRAELLVPSlegALPPdldtsedqqataaiiPPEPSYLEPldEGpf 1939
Cdd:PHA03247 2801 PWDPA---DPPAAVL-APAAALPPAASPAGPLPPPTSAQPTAP---PPPP---------------GPPPPSLPL--GG-- 2854
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1940 sAVITEEPVEWAHPSEQALASSligGTSENPVSWPVGSDLLLKSPQRFPESPKRfcPADPlhsaaPGPFSASEAPYPAPP 2019
Cdd:PHA03247 2855 -SVAPGGDVRRRPPSRSPAAKP---AAPARPPVRRLARPAVSRSTESFALPPDQ--PERP-----PQPQAPPPPQPQPQP 2923
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2020 ASPAPYALPVAEPGLEDvkdgvdavPAAISTSEAAPYAPPSGLESFFSNCKSLP---EAPLDVAPEPAcvaavAQVEALG 2096
Cdd:PHA03247 2924 PPPPQPQPPPPPPPRPQ--------PPLAPTTDPAGAGEPSGAVPQPWLGALVPgrvAVPRFRVPQPA-----PSREAPA 2990
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2097 PLENSfldgsrgLSHLGQVEPVPWADAFAGPEDDlDLGPFSLpelpLQTkdaadgeaepveesLAPPEEMPPGAPGVING 2176
Cdd:PHA03247 2991 SSTPP-------LTGHSLSRVSSWASSLALHEET-DPPPVSL----KQT--------------LWPPDDTEDSDADSLFD 3044
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 42767029 2177 GDVSTVVAEEPPALPPDQAStrlPAELEPEPSgepkldvaleaaveaetVPEERARGDPDSSVEPAPV 2244
Cdd:PHA03247 3045 SDSERSDLEALDPLPPEPHD---PFAHEPDPA-----------------TPEAGARESPSSQFGPPPL 3092
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
159-284 |
2.27e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 53.14 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 159 DKVNKRNERgeTRLHRAAIRGDARRIKE-LISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTP 237
Cdd:PHA02876 137 DKINESIEY--MKLIKERIQQDELLIAEmLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSV 214
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 42767029 238 LHDAANNGHYKVVKLLLrygGNPQQSNRKGETPLK-VANSPTMVNLLL 284
Cdd:PHA02876 215 LECAVDSKNIDTIKAII---DNRSNINKNDLSLLKaIRNEDLETSLLL 259
|
|
| PHA02875 |
PHA02875 |
ankyrin repeat protein; Provisional |
169-287 |
3.00e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165206 [Multi-domain] Cd Length: 413 Bit Score: 52.30 E-value: 3.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 169 ETRLHRAAIRGDARRIKELISEGA---DVNVKDfaGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNG 245
Cdd:PHA02875 69 ESELHDAVEEGDVKAVEELLDLGKfadDVFYKD--GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMG 146
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 42767029 246 HYKVVKLLLRY---------------------------------GGNPQQSNRKGETPLKVA----NSPTMVNLLLGKG 287
Cdd:PHA02875 147 DIKGIELLIDHkacldiedccgctpliiamakgdiaickmlldsGANIDYFGKNGCVAALCYaienNKIDIVRLFIKRG 225
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2237-2377 |
3.59e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.41 E-value: 3.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2237 SSVEPAPVPPEQRPLGSGDQGAEAEGPPAAslcAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQ---PE 2313
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQ---AAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPaaaPA 443
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 42767029 2314 AAEPKPTAEAPKAPRVEEIPQRMTrnraqmlanqskQGPPPSEKECAPTPAPVTRAKARGSEDD 2377
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIPVRVA------------PEPAVASAAPAPAAAPAAARLTPTEEGD 495
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
164-286 |
3.69e-06 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 52.33 E-value: 3.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 164 RNERGETRLHRAA--IRGDARRIKELISEGADVNVKDFAGWTALHEA-----CNRGYYDvakQLLAAGAEVNTKGLDDDT 236
Cdd:PHA03095 183 VDDRFRSLLHHHLqsFKPRARIVRELIRAGCDPAATDMLGNTPLHSMatgssCKRSLVL---PLLIAGISINARNRYGQT 259
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 42767029 237 PLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGK 286
Cdd:PHA03095 260 PLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMvrnNNGRAVRAALAK 312
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
160-238 |
5.24e-06 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 50.72 E-value: 5.24e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 42767029 160 KVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPL 238
Cdd:COG0666 211 DVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
176-289 |
5.67e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 51.50 E-value: 5.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 176 AIR-GDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQL-----------------------LAAGAEVNTKG 231
Cdd:PHA02874 42 AIRsGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLidngvdtsilpipciekdmiktiLDCGIDVNIKD 121
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42767029 232 LDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKGTY 289
Cdd:PHA02874 122 AELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAikhNFFDIIKLLLEKGAY 182
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2157-2388 |
6.01e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.80 E-value: 6.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2157 EESLAPPE---------EMPPGAPGVINGGdvstvVAEEPPALPPDqaSTRLPAELEPEPSGEPKLDVALEAAVEAETVP 2227
Cdd:PRK12323 342 ELALAPDEyagftmtllRMLAFRPGQSGGG-----AGPATAAAAPV--AQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAA 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2228 EERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASLCAPDGPAPNtvaqaqaadgagpeddteasrAAAPAEGPP 2307
Cdd:PRK12323 415 AARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARP---------------------AAAGPRPVA 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2308 GGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGS-EDDDAQAQHPRK 2386
Cdd:PRK12323 474 AAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETlAPAPAAAPAPRA 553
|
..
gi 42767029 2387 RR 2388
Cdd:PRK12323 554 AA 555
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
161-208 |
8.08e-06 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 45.42 E-value: 8.08e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 42767029 161 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEA 208
Cdd:pfam13857 9 LNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2114-2336 |
1.14e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.14 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2114 QVEPVPWADAFAGPEDDLDLGPFS-LPELPLQTKDAADGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPP 2192
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEeAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2193 DQ--ASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARgdpdssvEPAPVPPEQRPLGSGDQGAEAEGPPAASLCA 2270
Cdd:PRK07764 667 DGwpAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAAT-------PPAGQADDPAAQPPQAAQGASAPSPAADDPV 739
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 42767029 2271 PDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGiQPEAAEPKPTAEAPKAPRVEEIPQRM 2336
Cdd:PRK07764 740 PLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSP-PSEEEEMAEDDAPSMDDEDRRDAEEV 804
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
2156-2371 |
1.18e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 51.24 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2156 VEESLAPPEEMPPGAPGVINGgdvSTVVAEEPPALPPdQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEER--ARG 2233
Cdd:PRK10263 349 VDVPPAQPTVAWQPVPGPQTG---EPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPyyAPA 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2234 DPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAAslcapdgPAPntvaqaqaadGAGPEDDTEASRAAAPAEGPPGGI-QP 2312
Cdd:PRK10263 425 PEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFA-------PQS----------TYQTEQTYQQPAAQEPLYQQPQPVeQQ 487
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 42767029 2313 EAAEPKPTAEAPKAPR-----VEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKA 2371
Cdd:PRK10263 488 PVVEPEPVVEETKPARpplyyFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAA 551
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2139-2383 |
1.22e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.94 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2139 PELPLQTKDAADGEAEPVEESLA----PPEEMPPGAPGVINGGDVStvvAEEPPALPPDQASTRLPAELEPEPSGEPKLD 2214
Cdd:PHA03307 153 PAAGASPAAVASDAASSRQAALPlsspEETARAPSSPPAEPPPSTP---PAAASPRPPRRSSPISASASSPAPAPGRSAA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2215 VALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASLCA-----------------PDGPAPN 2277
Cdd:PHA03307 230 DDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAsssssprerspspspssPGSGPAP 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2278 TVAQAQAADGAGPEDDT-------EASRAAAPAEGPPGGIQPEAAEPKPtAEAPKAPRVEEIPQRMTRNRAQmlanqskq 2350
Cdd:PHA03307 310 SSPRASSSSSSSRESSSsstssssESSRGAAVSPGPSPSRSPSPSRPPP-PADPSSPRKRPRPSRAPSSPAA-------- 380
|
250 260 270
....*....|....*....|....*....|...
gi 42767029 2351 gpppsekecapTPAPVTRAKARGSEDDDAQAQH 2383
Cdd:PHA03307 381 -----------SAGRPTRRRARAAVAGRARRRD 402
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1720-1989 |
1.47e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 50.34 E-value: 1.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1720 HTPRTPSCSADDYADLVFDCADSQhstpVPTAPTSACSPSFFDRFSVASSGL-------------SENASQAPARPLSTN 1786
Cdd:pfam17823 90 HTPHGTDLSEPATREGAADGAASR----ALAAAASSSPSSAAQSLPAAIAALpseafsapraaacRANASAAPRAAIAAA 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1787 LYRSVSVDIRRTPEEEFSVGDKLFRQQSVPAASSYDSP---MPPSMEDRAPLPPV-PAEKFACLSPGYYSPDYGLPSPKV 1862
Cdd:pfam17823 166 SAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPatlTPARGISTAATATGhPAAGTALAAVGNSSPAAGTVTAAV 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1863 DALhcPPAAVVTVTPSPEGVFSSLQAKPSPSPRAELLVPSleGALPPDldtsedqqaTAAIIPPEPSylEPLDEGPFSAV 1942
Cdd:pfam17823 246 GTV--TPAALATLAAAAGTVASAAGTINMGDPHARRLSPA--KHMPSD---------TMARNPAAPM--GAQAQGPIIQV 310
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 42767029 1943 ITEEPV----------------EWAHPSEQALASSLIGGTSENPVSWPVGSDLLLKSPQRFPE 1989
Cdd:pfam17823 311 STDQPVhntageptpspsnttlEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMIPE 373
|
|
| ANK |
smart00248 |
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ... |
233-260 |
1.61e-05 |
|
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Pssm-ID: 197603 [Multi-domain] Cd Length: 30 Bit Score: 43.73 E-value: 1.61e-05
10 20
....*....|....*....|....*...
gi 42767029 233 DDDTPLHDAANNGHYKVVKLLLRYGGNP 260
Cdd:smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
175-235 |
2.12e-05 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 50.25 E-value: 2.12e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42767029 175 AAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDD 235
Cdd:PLN03192 629 AAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDD 689
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2115-2348 |
2.44e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.87 E-value: 2.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2115 VEPVPWADAFAGPEDDLDLGPFSLPELPLQTkdAADGEAEPVEESLAPPEEMPPGAPGVinggdvstvVAEEPPALPPDQ 2194
Cdd:PRK12323 390 AAPAAAAPAPAAPPAAPAAAPAAAAAARAVA--AAPARRSPAPEALAAARQASARGPGG---------APAPAPAPAAAP 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2195 ASTRLPAELEPEPsgepkldvaleAAVEAETVPEERARGDPDSSVEPAPVPPEQRPlgsgdqGAEAEGPPAASLCAPDGP 2274
Cdd:PRK12323 459 AAAARPAAAGPRP-----------VAAAAAAAPARAAPAAAPAPADDDPPPWEELP------PEFASPAPAQPDAAPAGW 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2275 APNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRV--EEIPQRMT----RNRAQMLANQS 2348
Cdd:PRK12323 522 VAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMfdGDWPALAArlpvRGLAQQLARQS 601
|
|
| PHA02741 |
PHA02741 |
hypothetical protein; Provisional |
161-256 |
2.73e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 165108 [Multi-domain] Cd Length: 169 Bit Score: 46.96 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDA----RRIKELISEGADVNVKD-FAGWTALHEACNRGYYDVAKQLL-AAGAEVNTKGLDD 234
Cdd:PHA02741 53 LNATDDAGQMCIHIAAEKHEAqlaaEIIDHLIELGADINAQEmLEGDTALHLAAHRRDHDLAEWLCcQPGIDLHFCNADN 132
|
90 100
....*....|....*....|..
gi 42767029 235 DTPLHDAANNGHYKVVKLLLRY 256
Cdd:PHA02741 133 KSPFELAIDNEDVAMMQILREI 154
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
1947-2369 |
3.18e-05 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 49.29 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1947 PVEWAH----PSEQALASSLIGGTSEnPVSWPVGSDLLLKSPQRFPESPKRFCPADPLHSAAPGPFSASEAPYPAPPASP 2022
Cdd:COG5180 28 PELWAAanndAVSQGDRSALASSPTR-PYARKIFEPLDIKLALGKPQLPSVAEPEAYLDPAPPKSSPDTPEEQLGAPAGD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2023 APYALPVAEPGLEDVKDGVDAVPAAI---STSEAAPYAPPSGLESFFSNCKSLPEAPLDVAPEPACVAAvaqvealgple 2099
Cdd:COG5180 107 LLVLPAAKTPELAAGALPAPAAAAALpkaKVTREATSASAGVALAAALLQRSDPILAKDPDGDSASTLP----------- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2100 nsfldgsRGLSHLGQVEPVPWADAFAGPEDDLDLGPFSLPELPLQTKDAADGEAEPVEESLAPPEEMPPGAPGVINGgdv 2179
Cdd:COG5180 176 -------PPAEKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAQEEPPDLTGGADHPRPEAASSPKVDPPSTSEARSR--- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2180 STVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLgsgdQGAE 2259
Cdd:COG5180 246 PATVDAQPEMRPPADAKERRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARPIDVKGVASAPPATRPV----RPPG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2260 AEGPPAASLCAPDGPAPNTVaqaqaadgagPEddteasrAAAPAEGPPGGIQPeAAEPKPTAEAPK-APRveeiPQRMTR 2338
Cdd:COG5180 322 GARDPGTPRPGQPTERPAGV----------PE-------AASDAGQPPSAYPP-AEEAVPGKPLEQgAPR----PGSSGG 379
|
410 420 430
....*....|....*....|....*....|.
gi 42767029 2339 NRAqmlANQSKQGPPPSEKECAPTPAPVTRA 2369
Cdd:COG5180 380 DGA---PFQPPNGAPQPGLGRRGAPGPPMGA 407
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
2109-2381 |
3.30e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 49.32 E-value: 3.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2109 LSHLGQVEPVPWADAFAGPEDDL--DLGPFSLPE-LPLQTKDAADGEAEpveESLAPPE---------EMPPGAPGVING 2176
Cdd:PRK08691 289 LQQLALIQAVPSALAHDDPDSDIlhRLAQTISGEqIQLYYQIAVHGKRD---LSLAPDEyagfmmtllRMLAFAPLAAAS 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2177 GDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPkldvalEAAVEAETVPEERArgdpdssvepapVPPEQRPLGSGDQ 2256
Cdd:PRK08691 366 CDANAVIENTELQSPSAQTAEKETAAKKPQPRPEA------ETAQTPVQTASAAA------------MPSEGKTAGPVSN 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2257 GAEAEGPP------AASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAePKPTAEAPKAPRVE 2330
Cdd:PRK08691 428 QENNDVPPwedapdEAQTAAGTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSEN-PIQATPNDEAVETE 506
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 42767029 2331 EIPQRMTRNRAQMLANQSKQGPPPSEKECAPTP--APVTRAKARGSEDDDAQA 2381
Cdd:PRK08691 507 TFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDweHAAPADTAGGGADEEAEA 559
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
161-274 |
3.53e-05 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 48.87 E-value: 3.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDA--RRIKELISEGADVNVKDFAGWTALHEACN--RGYYDVAKQLLAAGAEVNTKGLDDDT 236
Cdd:PHA03095 145 VNALDLYGMTPLAVLLKSRNAnvELLRLLIDAGADVYAVDDRFRSLLHHHLQsfKPRARIVRELIRAGCDPAATDMLGNT 224
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 42767029 237 PLHDAANNGHYK--VVKLLLRYGGNPQQSNRKGETPLKVA 274
Cdd:PHA03095 225 PLHSMATGSSCKrsLVLPLLIAGISINARNRYGQTPLHYA 264
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2188-2324 |
5.14e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.56 E-value: 5.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2188 PALPPDQASTRLPAElEPEPSGEPkldVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLgSGDQGAEAEGPPAAS 2267
Cdd:PRK14951 371 EAAAPAEKKTPARPE-AAAPAAAP---VAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPA-AAAPAAAPAAAPAAV 445
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 42767029 2268 LCAPDGPAPNTVAQAQAADGAGPEDDTeASRAAAPAEGPPggiqpeAAEPKPTAEAP 2324
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAV-ASAAPAPAAAPA------AARLTPTEEGD 495
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2147-2326 |
6.87e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 6.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2147 DAADGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALP-PDQASTRLPAELEPEPSGEpklDVALEAAVeaeT 2225
Cdd:PHA03247 266 DRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPaPPDPPPPAPAGDAEEEDDE---DGAMEVVS---P 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2226 VPEERAR------------GDPDSSVEP----------APVPPEQR--------PLGSGDQGAEAEGP----PAASLCAP 2271
Cdd:PHA03247 340 LPRPRQHyplgfpkrrrptWTPPSSLEDlsagrhhpkrASLPTRKRrsarhaatPFARGPGGDDQTRPaapvPASVPTPA 419
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 42767029 2272 DGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPeAAEPKPTAEAPKA 2326
Cdd:PHA03247 420 PTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATE-PAPDDPDDATRKA 473
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
665-794 |
7.48e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.48 E-value: 7.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 665 KQKSDKAILLENDLST-ENKLKVLkhDRDHFKKEE-------KLSKMKLEEKEWLFKDEKSLKRIKDTNKDISRSFREEK 736
Cdd:TIGR04523 36 KQLEKKLKTIKNELKNkEKELKNL--DKNLNKDEEkinnsnnKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIK 113
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 42767029 737 -DRSNKAEKERSL----KEKSPKEEKLRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKI 794
Cdd:TIGR04523 114 nDKEQKNKLEVELnkleKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELN 176
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2218-2388 |
7.92e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 7.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2218 EAAVEAETVPEERARGDPDSSVEPAPVPPEQRPlgsgdqgaeAEGPPAAslcAPDGPAPNTVAQAQAADGAGPEDDTEAS 2297
Cdd:PRK07764 371 ERGLLARLERLERRLGVAGGAGAPAAAAPSAAA---------AAPAAAP---APAAAAPAAAAAPAPAAAPQPAPAPAPA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2298 RAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGSEDD 2377
Cdd:PRK07764 439 PAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPE 518
|
170
....*....|.
gi 42767029 2378 DAQAQHPRKRR 2388
Cdd:PRK07764 519 ILAAVPKRSRK 529
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
160-229 |
9.36e-05 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 47.74 E-value: 9.36e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 160 KVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNT 229
Cdd:PHA03100 184 PINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253
|
|
| TRPV5-6 |
cd22192 |
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ... |
169-258 |
1.04e-04 |
|
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.
Pssm-ID: 411976 [Multi-domain] Cd Length: 609 Bit Score: 47.70 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 169 ETRLHRAAIRGDARRIKELI-SEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAE-VNTKGLDD----DTPLHDAA 242
Cdd:cd22192 18 ESPLLLAAKENDVQAIKKLLkCPSCDLFQRGALGETALHVAALYDNLEAAVVLMEAAPElVNEPMTSDlyqgETALHIAV 97
|
90
....*....|....*.
gi 42767029 243 NNGHYKVVKLLLRYGG 258
Cdd:cd22192 98 VNQNLNLVRELIARGA 113
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
233-265 |
1.07e-04 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 41.51 E-value: 1.07e-04
10 20 30
....*....|....*....|....*....|....
gi 42767029 233 DDDTPLHDAA-NNGHYKVVKLLLRYGGNPQQSNR 265
Cdd:pfam00023 1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
|
|
| PHA03321 |
PHA03321 |
tegument protein VP11/12; Provisional |
2167-2385 |
1.28e-04 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 223041 [Multi-domain] Cd Length: 694 Bit Score: 47.65 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2167 PPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVE----PA 2242
Cdd:PHA03321 430 PPGAPAPRRDNDPPPPPRARPGSTPACARRARAQRARDAGPEYVDPLGALRRLPAGAAPPPEPAAAPSPATYYTrmggGP 509
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2243 PVPP-------EQRPLGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGP----EDDTEASRAAAPAEGP----- 2306
Cdd:PHA03321 510 PRLPprnrateTLRPDWGPPAAAPPEQMEDPYLEPDDDRFDRRDGAAAAATSHPReapaPDDDPIYEGVSDSEEPvyeei 589
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2307 --------PGGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKAR-GSEDD 2377
Cdd:PHA03321 590 ptprvyqnPLPRPMEGAGEPPDLDAPTSPWVEEENPIYGWGDSPLFSPPPAARFPPPDPALSPEPPALPAHRPRpGALAP 669
|
....*...
gi 42767029 2378 DAQAQHPR 2385
Cdd:PHA03321 670 DGPANLAA 677
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2150-2266 |
1.35e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 46.68 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2150 DGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEP---------EPSGEPKLDVALEAA 2220
Cdd:NF040712 189 DPDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarrrragveQPEDEPVGPGAAPAA 268
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 42767029 2221 VEAE--------TVPEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAA 2266
Cdd:NF040712 269 EPDEatrdagepPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAP 322
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
236-284 |
1.39e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 41.88 E-value: 1.39e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 42767029 236 TPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLL 284
Cdd:pfam13637 3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAasnGNVEVLKLLL 54
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
201-228 |
1.84e-04 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 40.74 E-value: 1.84e-04
10 20
....*....|....*....|....*....
gi 42767029 201 GWTALHEACNR-GYYDVAKQLLAAGAEVN 228
Cdd:pfam00023 2 GNTPLHLAAGRrGNLEIVKLLLSKGADVN 30
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2147-2392 |
2.64e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.70 E-value: 2.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2147 DAADGEAEPVEESLAPPEEMPP----GAPGVINggdVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAV- 2221
Cdd:PHA03307 12 EAAAEGGEFFPRPPATPGDAADdllsGSQGQLV---SDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTp 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2222 -------EAETVPEERARGDPDSSVEPAPVPPEQR--------PLGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAAD 2286
Cdd:PHA03307 89 twslstlAPASPAREGSPTPPGPSSPDPPPPTPPPaspppspaPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2287 GAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRMT------RNRAQMLANQSKQGPPPSEKECA 2360
Cdd:PHA03307 169 SRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSpapapgRSAADDAGASSSDSSSSESSGCG 248
|
250 260 270
....*....|....*....|....*....|....*..
gi 42767029 2361 P-----TPAPVTRAKARGSEDDDAQAQHPRKRRFQRS 2392
Cdd:PHA03307 249 WgpeneCPLPRPAPITLPTRIWEASGWNGPSSRPGPA 285
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
2229-2336 |
3.26e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 3.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2229 ERARGDPDSsvepapVPPEQRPLgSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGP----EDDTEASRAAAPAE 2304
Cdd:PRK12270 16 QQYLADPNS------VDPSWREF-FADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPapapPAAAAPAAPPKPAA 88
|
90 100 110
....*....|....*....|....*....|..
gi 42767029 2305 GPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRM 2336
Cdd:PRK12270 89 AAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPL 120
|
|
| ANK |
smart00248 |
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ... |
201-228 |
3.87e-04 |
|
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Pssm-ID: 197603 [Multi-domain] Cd Length: 30 Bit Score: 39.88 E-value: 3.87e-04
10 20
....*....|....*....|....*...
gi 42767029 201 GWTALHEACNRGYYDVAKQLLAAGAEVN 228
Cdd:smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2119-2500 |
4.17e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2119 PWADAFAGPEDDLD-------LG-PFSLPELplqTKDAADGEaePVEESlaPPEEMPPGAPGvinGGDVSTVVAEEPPAL 2190
Cdd:PHA03247 2439 PGGDVLAGLAADGDpffartiLGaPFSLSLL---LGELFPGA--PVYRR--PAEARFPFAAG---AAPDPGGGGPPDPDA 2508
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2191 PPdQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERArGDPdssvePAPVPPEQRPlgsgdqgaeaegPPAASLCA 2270
Cdd:PHA03247 2509 PP-APSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASDDA-GDP-----PPPLPPAAPP------------AAPDRSVP 2569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2271 PDGPAPNTVAQAQAADGAGPEDDTEASRAAAPaeGPPGGIQPEAAEPKPTAEAPKAPRveeipqrmtrnraqmlanqskq 2350
Cdd:PHA03247 2570 PPRPAPRPSEPAVTSRARRPDAPPQSARPRAP--VDDRGDPRGPAPPSPLPPDTHAPD---------------------- 2625
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2351 gPPPSEKECAPTPAPVTR-AKARGSEDDDAQAQHPRKRRFQRSTQQLQQQLNTSTQQ--TREVIQQTLAAIVDAIKLDAI 2427
Cdd:PHA03247 2626 -PPPPSPSPAANEPDPHPpPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQrpRRRAARPTVGSLTSLADPPPP 2704
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 42767029 2428 EPYHSDRANPYFEYLQIRKKIEEKRKilccITPQAPQCYAEYVTYTGSyLLDGKPLSKLHIPVIAPPPSLAEP 2500
Cdd:PHA03247 2705 PPTPEPAPHALVSATPLPPGPAAARQ----ASPALPAAPAPPAVPAGP-ATPGGPARPARPPTTAGPPAPAPP 2772
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
161-257 |
4.21e-04 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 45.40 E-value: 4.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 161 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLA----AGAEVNTkgldddt 236
Cdd:PHA03095 250 INARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAknpsAETVAAT------- 322
|
90 100
....*....|....*....|....*....
gi 42767029 237 pLHDAANNGHY--------KVVKLLLRYG 257
Cdd:PHA03095 323 -LNTASVAGGDipsdatrlCVAKVVLRGA 350
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
650-943 |
4.44e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.12 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 650 QELKLKSFTYEYEDSKQKSDKAILLENDLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKDEKSLKRIKDTNKDIS 729
Cdd:pfam02463 743 QKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQL 822
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 730 RSFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKS-KDRPSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKEKVY 808
Cdd:pfam02463 823 LIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEiTKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKEL 902
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 809 REDSAFDEYCNKNQFLENEDTKFSLSDDQRDRWFSDLSDSSFDFKGEDSWDSPVTDYRDMKSDSVAKLILETVKEDSKER 888
Cdd:pfam02463 903 EEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEE 982
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 42767029 889 rrdsrarekrdyrepfFRKKDRDYLDKNSEKRKEQTEKhKSVPGYLSEKDKKRRE 943
Cdd:pfam02463 983 ----------------FEEKEERYNKDELEKERLEEEK-KKLIRAIIEETCQRLK 1020
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
187-239 |
4.63e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 40.41 E-value: 4.63e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 42767029 187 LISEG-ADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLH 239
Cdd:pfam13857 1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALD 54
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2217-2379 |
4.68e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.75 E-value: 4.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2217 LEAAVEAETVPEERARGDPDSSVEPAPVPPEQ--RPLGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQ-AADGAGPEDD 2293
Cdd:PRK07764 580 GDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEaaRPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAaPEHHPKHVAV 659
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2294 TEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPpsekecAPTPAPVTRAKARG 2373
Cdd:PRK07764 660 PDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAA------QPPQAAQGASAPSP 733
|
....*.
gi 42767029 2374 SEDDDA 2379
Cdd:PRK07764 734 AADDPV 739
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2188-2332 |
6.31e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.76 E-value: 6.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2188 PALPPDQASTRLPAELEPEPSGEPkldVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAAS 2267
Cdd:NF040712 197 RPLATVPRLAREPADARPEEVEPA---PAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEA 273
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42767029 2268 LcAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKA--PRVEEI 2332
Cdd:NF040712 274 T-RDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRAsvPSWDDV 339
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
2173-2366 |
6.63e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.46 E-value: 6.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2173 VINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSgEPKLDVAL-EAAVEAETVPEERArgdPDSSVEPAPVPPEQRPL 2251
Cdd:PRK10263 310 LLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPP-VASVDVPPaQPTVAWQPVPGPQT---GEPVIAPAPEGYPQQSQ 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2252 GSGDQGAEAEG-----PPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAA--EPKPTAEaP 2324
Cdd:PRK10263 386 YAQPAVQYNEPlqqpvQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQStfAPQSTYQ-T 464
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 42767029 2325 KAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPV 2366
Cdd:PRK10263 465 EQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPL 506
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1720-2061 |
8.58e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 8.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1720 HTPRTPSCSADDYADLVFDcADSQHSTP--VPTAPTSACSPSFFDRFSVASSGLSENASQAPARPLSTNLYRSVSVDIRR 1797
Cdd:PHA03307 20 FFPRPPATPGDAADDLLSG-SQGQLVSDsaELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1798 TPEEEFSVGdklfrqqsvPAASSYDSPMPPSMEDRAPLPPVPAEKFACLSPGYYSPDYGLPSPKVDALHCPPAAVVTVTP 1877
Cdd:PHA03307 99 SPAREGSPT---------PPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1878 SPEGVFSSL--QAKPSPSPRAELLVPSLEGALPPDLDTSEDQQATAAIIPPEPSylePLDEGPFSAVITEEPvewAHPSE 1955
Cdd:PHA03307 170 RQAALPLSSpeETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPA---PGRSAADDAGASSSD---SSSSE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1956 QALASSliGGTSENPVswPVGSDLLLKSPQRFPESPKrfcPADPLHSAAPGPFSASEAPYPAPPASPAPYALPVAEPGLE 2035
Cdd:PHA03307 244 SSGCGW--GPENECPL--PRPAPITLPTRIWEASGWN---GPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASS 316
|
330 340
....*....|....*....|....*.
gi 42767029 2036 DVKDGVDAVPAAISTSEAAPYAPPSG 2061
Cdd:PHA03307 317 SSSSSRESSSSSTSSSSESSRGAAVS 342
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2230-2384 |
8.97e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 8.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2230 RARGDPDSSVEPAPVPPEQRPLGSGDQGAE-----AEGPPAASLcAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAE 2304
Cdd:PRK07764 585 EAVVGPAPGAAGGEGPPAPASSGPPEEAARpaapaAPAAPAAPA-PAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2305 GPPGGIQPEAAEPKPTAEAPkAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGSEDDDAQAQHP 2384
Cdd:PRK07764 664 DGGDGWPAKAGGAAPAAPPP-APAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLP 742
|
|
| TRPV5-6 |
cd22192 |
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ... |
168-271 |
9.29e-04 |
|
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.
Pssm-ID: 411976 [Multi-domain] Cd Length: 609 Bit Score: 44.62 E-value: 9.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 168 GETRLHRAAIRgDARRIKELISEGADVNVKD------FAGWTALHEACNRGYYDVAKQLLAAGAEVNT---------KGL 232
Cdd:cd22192 51 GETALHVAALY-DNLEAAVVLMEAAPELVNEpmtsdlYQGETALHIAVVNQNLNLVRELIARGADVVSpratgtffrPGP 129
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 42767029 233 DD-----DTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPL 271
Cdd:cd22192 130 KNliyygEHPLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVL 173
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
695-942 |
1.36e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 44.27 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 695 KKEEKLSKMKLEEKEW--LFKDEKSLKRIKDTNKdisrsFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKSKDR 772
Cdd:PTZ00108 1103 KVEKLNAELEKKEKELekLKNTTPKDMWLEDLDK-----FEEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKKK 1177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 773 PSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKEKVYREDSAFDEYCNKNQFLENEDTKFSLSDDQRDRWFSDLSDSSFDF 852
Cdd:PTZ00108 1178 EKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDN 1257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 853 KGEDSWDSPVTDYRD---MKSDSVAKLILETVKEDSKERRRDSRARE-------KRDYREPFFRKKDRDYLDKNSEKRKE 922
Cdd:PTZ00108 1258 DEFSSDDLSKEGKPKnapKRVSAVQYSPPPPSKRPDGESNGGSKPSSptkkkvkKRLEGSLAALKKKKKSEKKTARKKKS 1337
|
250 260
....*....|....*....|
gi 42767029 923 QTEKHKSVPGYLSEKDKKRR 942
Cdd:PTZ00108 1338 KTRVKQASASQSSRLLRRPR 1357
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2203-2343 |
1.41e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2203 LEPEPSGEP-KLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLGSGdqGAEAEGPPAASLCAPDGPAPNTVAQ 2281
Cdd:NF040712 199 LATVPRLARePADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAG--VEQPEDEPVGPGAAPAAEPDEATRD 276
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 42767029 2282 AQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPrveeiPQRMTRNRAQM 2343
Cdd:NF040712 277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAP-----KPKRRRRRASV 333
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2188-2341 |
1.86e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.82 E-value: 1.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2188 PALPPDQAStrLPAELEPEPSGEPkldVALEAAVEAETVPeeRARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAAS 2267
Cdd:PRK07764 365 PSASDDERG--LLARLERLERRLG---VAGGAGAPAAAAP--SAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAP 437
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 42767029 2268 LCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRA 2341
Cdd:PRK07764 438 APAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
2176-2364 |
1.94e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 43.66 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2176 GGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGD--PDS---------SVEPAPV 2244
Cdd:PRK14086 79 GRPIRIAITVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDqlPTArpaypayqqRPEPGAW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2245 PPEQRPLgsGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGPEDDT--EASRAAAPAEGPPGGIQPEAAEPKPTA- 2321
Cdd:PRK14086 159 PRAADDY--GWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQrrRDYDHPRPDWDRPRRDRTDRPEPPPGAg 236
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 42767029 2322 ----EAPKAPRVEEIPQRMTRNRAqmlanqskQGPPPSEKECAPTPA 2364
Cdd:PRK14086 237 hvhrGGPGPPERDDAPVVPIRPSA--------PGPLAAQPAPAPGPG 275
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
2103-2368 |
2.33e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 43.51 E-value: 2.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2103 LDGSRGLSHLGQVEPV--PWADAFAGPEDDLDLGPFSLPElPLQTKDAADGeaePVEESlappEEMPPGApgvinggdvs 2180
Cdd:PHA03379 405 LEKASEPTYGTPRPPVekPRPEVPQSLETATSHGSAQVPE-PPPVHDLEPG---PLHDQ----HSMAPCP---------- 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2181 tvVAEEPPALPPDQAstrlPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPlgsgdqgAEA 2260
Cdd:PHA03379 467 --VAQLPPGPLQDLE----PGDQLPGVVQDGRPACAPVPAPAGPIVRPWEASLSQVPGVAFAPVMPQPMP-------VEP 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2261 EGPPAASLCAPDGPAPntvaqaqaadgagpeddteaSRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPR-VEEIPQR--MT 2337
Cdd:PHA03379 534 VPVPTVALERPVCPAP--------------------PLIAMQGPGETSGIVRVRERWRPAPWTPNPPRsPSQMSVRdrLA 593
|
250 260 270
....*....|....*....|....*....|.
gi 42767029 2338 RNRAQMLANQSKQGPPPSEKECAPTPAPVTR 2368
Cdd:PHA03379 594 RLRAEAQPYQASVEVQPPQLTQVSPQQPMEY 624
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
739-1270 |
2.56e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.42 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 739 SNKAEKERS--LKEKSPKEEKLRLYKEERKKKSKdRPSKLEKKNDLKEDKIS----KEKEKIFKEDKEKLKKEKVYREDS 812
Cdd:pfam02463 148 AMMKPERRLeiEEEAAGSRLKRKKKEALKKLIEE-TENLAELIIDLEELKLQelklKEQAKKALEYYQLKEKLELEEEYL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 813 AFDEYCNKNQFLENEDTKFSLSDDQRDRWFSDLSDSSFDF----KGEDSWDSPVTDYRDMKSDSVAKLILETVKEDSKER 888
Cdd:pfam02463 227 LYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKlaqvLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLE 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 889 RRDSRAREKRDYREPFFRKKDRDYLDKN---SEKRKEQTEKHKSVPGYLSEKDKKRRESAEAGRDRKDALESCKERRDGR 965
Cdd:pfam02463 307 RRKVDDEEKLKESEKEKKKAEKELKKEKeeiEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERL 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 966 AKpEEVHREELKECGCESGFKDKSDGDFGKGLEPWERhhpAREKEKKDGPDKERKEKTKPERYKEKSSDKDKSEKSILEK 1045
Cdd:pfam02463 387 SS-AAKLKEEELELKSEEEKEAQLLLELARQLEDLLK---EEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLK 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1046 cqKDKEFDKCFKEKKDTKEKHKDTHGKDKERKASLDQGKEKKEKAFPGIISEDFSEKKDDKKGKEKSwyIADIFTDESED 1125
Cdd:pfam02463 463 --DELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISA--HGRLGDLGVAV 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1126 DRDSCMGSGFKMGEASDLPRTDGLQEKEEGREA----YASDRHRKSSDKQHPERQKDKEPRDRRKDRGAADAGRDKKEKV 1201
Cdd:pfam02463 539 ENYKVAISTAVIVEVSATADEVEERQKLVRALTelplGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADED 618
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 42767029 1202 FEKHKEKKDKESTEKYKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAEDKAKSKHKEKSDKEHSKERKS 1270
Cdd:pfam02463 619 DKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAES 687
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2239-2393 |
3.24e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.45 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2239 VEPAPVPPEqRPLGSGDQGA-----EAEGPPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPE 2313
Cdd:NF040712 188 IDPDFGRPL-RPLATVPRLArepadARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAP 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2314 AAEPKPTAEAPKAPRVEEIPQRMTRNRAqmlanqskqgPPPSEKECAPTPAPVTRAKARgsedDDAQAQHPRKRRFQRST 2393
Cdd:NF040712 267 AAEPDEATRDAGEPPAPGAAETPEAAEP----------PAPAPAAPAAPAAPEAEEPAR----PEPPPAPKPKRRRRRAS 332
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2151-2329 |
3.84e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 3.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2151 GEAEPVEESLAPPEE-----MPPGAPGVINGGDVSTVVAEEPPALPPdqastrlPAELEPEPSGEPkldvalEAAVEAET 2225
Cdd:PRK07764 365 PSASDDERGLLARLErlerrLGVAGGAGAPAAAAPSAAAAAPAAAPA-------PAAAAPAAAAAP------APAAAPQP 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2226 VPEERARGDPdssvEPAPVPPEQRPLGSGDQGAEAEGPPAAslcaPDGPAPNTVAQAQAADGAGPEDDTE--ASRAAAPA 2303
Cdd:PRK07764 432 APAPAPAPAP----PSPAGNAPAGGAPSPPPAAAPSAQPAP----APAAAPEPTAAPAPAPPAAPAPAAApaAPAAPAAP 503
|
170 180
....*....|....*....|....*.
gi 42767029 2304 EGPPGGIQPEAAEPKPTAEAPKAPRV 2329
Cdd:PRK07764 504 AGADDAATLRERWPEILAAVPKRSRK 529
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1816-1964 |
5.11e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.39 E-value: 5.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1816 PAASSYDSPMPPSMEDRAPLPPVPAEKFACLSPgyysPDYGLPSPKvdalhcPPAAVVTVTPSPEGVFSSLQAKPSPSPR 1895
Cdd:PRK14951 385 EAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAP----PAAAPPAPV------AAPAAAAPAAAPAAAPAAVALAPAPPAQ 454
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42767029 1896 AellvpSLEGALPPDLDTSEDQQATAAIIP---PEPSYLEPLDEGPF-----SAVITEEPVEwAHPSEQALASSLIG 1964
Cdd:PRK14951 455 A-----APETVAIPVRVAPEPAVASAAPAPaaaPAAARLTPTEEGDVwhatvQQLAAAEAIT-ALARELALQSELVA 525
|
|
| Ank_3 |
pfam13606 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
201-229 |
5.84e-03 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.
Pssm-ID: 463933 [Multi-domain] Cd Length: 30 Bit Score: 36.47 E-value: 5.84e-03
10 20
....*....|....*....|....*....
gi 42767029 201 GWTALHEACNRGYYDVAKQLLAAGAEVNT 229
Cdd:pfam13606 2 GNTPLHLAARNGRLEIVKLLLENGADINA 30
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2148-2271 |
6.32e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.01 E-value: 6.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2148 AADGEAEPVEESLAPPEEMPPGAPGVinggdVSTVVAEEPPALPP--DQASTRLPAELEPEPSGEPkldvALEAAVEAET 2225
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAAAPV-----AQAAAAPAPAAAPAaaASAPAAPPAAAPPAPVAAP----AAAAPAAAPA 439
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 42767029 2226 VPEERARGDPDSSVEPAP----VPPEQRP-LGSGDQGAEAEGPPAASLCAP 2271
Cdd:PRK14951 440 AAPAAVALAPAPPAQAAPetvaIPVRVAPePAVASAAPAPAAAPAAARLTP 490
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2168-2382 |
7.47e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 7.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2168 PGAPGVINGGDVSTVVAEEPPALPPDQastrlPAELEPEPSGEPKLDV---ALEAAVEAETVPEERARGDPDSSVE---- 2240
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPP-----PEAAAPNGAAAPPDGVwgaALAGAPLALPAPPDPPPPAPAGDAEeedd 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2241 ---------PAPVPPEQRPLGSGDQGAEAEGPPAA--SLCAPDGPAPNTVAQAQAADGagpeddteASRAAAP-AEGPPG 2308
Cdd:PHA03247 330 edgamevvsPLPRPRQHYPLGFPKRRRPTWTPPSSleDLSAGRHHPKRASLPTRKRRS--------ARHAATPfARGPGG 401
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 42767029 2309 GIQPEAAEPKP-TAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPApvtrAKARGSEDDDAQAQ 2382
Cdd:PHA03247 402 DDQTRPAAPVPaSVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPA----TEPAPDDPDDATRK 472
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2034-2333 |
7.82e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 7.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2034 LEDVKDGVDAVPAAISTSEAAPyAPPSGLESFFSNCKSLPEAPLDVAPEPACVAAVAQVEALGPLENSFLDGSRGLSHLG 2113
Cdd:PRK07764 574 LAEELGGDWQVEAVVGPAPGAA-GGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEH 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2114 QVEPVPWADAFAGPEDdldlgpfslpelplqtKDAADGEAEPVEESLAPPEEMPPGApgvinggdvstvvAEEPPALPPD 2193
Cdd:PRK07764 653 HPKHVAVPDASDGGDG----------------WPAKAGGAAPAAPPPAPAPAAPAAP-------------AGAAPAQPAP 703
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2194 QASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASlcapdg 2273
Cdd:PRK07764 704 APAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPS------ 777
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2274 papntvaqaqaadgaGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIP 2333
Cdd:PRK07764 778 ---------------PPSEEEEMAEDDAPSMDDEDRRDAEEVAMELLEEELGAKKIEEFA 822
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2073-2333 |
7.88e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2073 PEAPLDVAPEPACVAAVAQVEALGPlensfldGSRGLSHLGQVEPVPWADAFAGPEddLDLGPFSLPElPLQTKDAADGE 2152
Cdd:PRK07003 373 PARVAGAVPAPGARAAAAVGASAVP-------AVTAVTGAAGAALAPKAAAAAAAT--RAEAPPAAPA-PPATADRGDDA 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2153 AePVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPPDqaSTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERAR 2232
Cdd:PRK07003 443 A-DGDAPVPAKANARASADSRCDERDAQPPADSGSASAPAS--DAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASRE 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2233 GDPDSSVEPAPVPPEQRPlgSGDQGAEAEGPPAASL---------------CAPDGPAPNTVAQAQAADGAGPeddteas 2297
Cdd:PRK07003 520 DAPAAAAPPAPEARPPTP--AAAAPAARAGGAAAALdvlrnagmrvssdrgARAAAAAKPAAAPAAAPKPAAP------- 590
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 42767029 2298 RAAAPAEGPPGGIQPEAAEPKPTAEAPKA-------PRVEEIP 2333
Cdd:PRK07003 591 RVAVQVPTPRARAATGDAPPNGAARAEQAaesrgapPPWEDIP 633
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
583-789 |
7.89e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 41.96 E-value: 7.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 583 GSSVESLKPVRKRQEHRKRASLSEKKSpflSSAEGAVPKLDKEGKVVKKHKTKHKHKNKEKGQCSISQELKLKSFTYEYE 662
Cdd:PTZ00108 1164 GKASKLRKPKLKKKEKKKKKSSADKSK---KASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSV 1240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 663 DSKQKSDKAILLENDLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEW-------LFKDEKSLKRIKDTNKDISRSFREE 735
Cdd:PTZ00108 1241 KRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPskrpdgeSNGGSKPSSPTKKKVKKRLEGSLAA 1320
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 42767029 736 KDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKSkdRPSKLEKKNDLKEDKISK 789
Cdd:PTZ00108 1321 LKKKKKSEKKTARKKKSKTRVKQASASQSSRLLR--RPRKKKSDSSSEDDDDSE 1372
|
|
| CAF-1_p150 |
pfam11600 |
Chromatin assembly factor 1 complex p150 subunit, N-terminal; CAF-1_p150 is a polypeptide ... |
687-793 |
7.99e-03 |
|
Chromatin assembly factor 1 complex p150 subunit, N-terminal; CAF-1_p150 is a polypeptide subunit of CAF-1, which functions in depositing newly synthesized and acetylated histones H3/H4 into chromatin during DNA replication and repair. CAF-1_p150 includes the HP1 interaction site, the PEST, KER and ED interacting sites. CAF-1_p150 interacts directly with newly synthesized and acetylated histones through the acidic KER and ED domains. The PEST domain is associated with proteins that undergo rapid proteolysis.
Pssm-ID: 402959 [Multi-domain] Cd Length: 164 Bit Score: 39.67 E-value: 7.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 687 LKHDRDHFKKEEKLSKMKlEEKEWLFKDEKSLKRikDTNKDISRSFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERK 766
Cdd:pfam11600 18 LEKDKERLRRQLKLEAEK-EEKERLKEEAKAEKE--RAKEEARRKKEEEKELKEKERREKKEKDEKEKAEKLRLKEEKRK 94
|
90 100
....*....|....*....|....*..
gi 42767029 767 KKSKDRPSKLEKKNDLKEDKISKEKEK 793
Cdd:pfam11600 95 EKQEALEAKLEEKRKKEEEKRLKEEEK 121
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1864-2249 |
8.68e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 41.68 E-value: 8.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1864 ALHCPPAAVVTVTPSPEGVFSSLQAKPSPSPRAELLVPSLEGALPPDLDTSEDQ-----QATAAIIP---PEP-SYLEPL 1934
Cdd:pfam03154 173 VLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAphtliQQTPTLHPqrlPSPhPPLQPM 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 1935 DEGPFSAVITEEPVEWA--HPSEQALASSLIGGTSENPVSWPvgsdlllksPQRFPESPKRFCPADPLHSAAPGPFSASE 2012
Cdd:pfam03154 253 TQPPPPSQVSPQPLPQPslHGQMPPMPHSLQTGPSHMQHPVP---------PQPFPLTPQSSQSQVPPGPSPAAPGQSQQ 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2013 APYPAPPASPAPYALPVAEPGLEdvkdgvdavPAAISTSEAAPyaPPSGLESFFSNCKSLPEAPLDVAPEPACVAA-VAQ 2091
Cdd:pfam03154 324 RIHTPPSQSQLQSQQPPREQPLP---------PAPLSMPHIKP--PPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSnLPP 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2092 VEALGPLEnsfldgSRGLSHLGQVEPVPWAdaFAGPEDDLDLGPFSLPELPLQTKDAADGEAEPVEESLAPPEEMPPGAP 2171
Cdd:pfam03154 393 PPALKPLS------SLSTHHPPSAHPPPLQ--LMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQ 464
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 42767029 2172 GVINGGDVSTVVaeePPALPPDQASTRLPAeLEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQR 2249
Cdd:pfam03154 465 HPFVPGGPPPIT---PPSGPPTSTSSAMPG-IQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPR 538
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2235-2423 |
9.58e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.51 E-value: 9.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2235 PDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASlcAPDGPApntvaqaqaadgagpeddteASRAAAPAEGPPGGIQPEA 2314
Cdd:PRK07764 365 PSASDDERGLLARLERLERRLGVAGGAGAPAAA--APSAAA--------------------AAPAAAPAPAAAAPAAAAA 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42767029 2315 AEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGSEDDDAQAQHPRKRRFQRSTQ 2394
Cdd:PRK07764 423 PAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502
|
170 180
....*....|....*....|....*....
gi 42767029 2395 QlqqqlntSTQQTREVIQQTLAAIVDAIK 2423
Cdd:PRK07764 503 P-------AGADDAATLRERWPEILAAVP 524
|
|
| |
