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Conserved domains on  [gi|46403546|gb|AAS92816|]
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NADH dehydrogenase subunit 4 (mitochondrion) [Microcebus murinus]

Protein Classification

NADH dehydrogenase subunit 4( domain architecture ID 11475903)

NADH dehydrogenase subunit 4 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


:

Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 770.60  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00110   1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   81 QHHLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110  81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  161 LVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  241 YGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 46403546  401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGLTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
 
Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 770.60  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00110   1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   81 QHHLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110  81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  161 LVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  241 YGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 46403546  401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGLTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
59-458 1.31e-80

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 257.70  E-value: 1.31e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  59 DSLSSPLLMLTVWLLPLMIMASqhhlMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGN 138
Cdd:COG1008  81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 139 QtERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLvMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFD-IAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNP-TTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 298 IVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 378 ELFVIMASFSWSNVTITMTGLNMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGL 457
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDL 474

                .
gi 46403546 458 T 458
Cdd:COG1008 475 I 475
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
59-459 3.19e-71

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 232.91  E-value: 3.19e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    59 DSLSSPLLMLTVWLLPLMIMASQHHLMKesltRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGN 138
Cdd:TIGR01972  76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   139 QTeRLNAGLYFLFYTLIGSLPLLVALIY-VQISLGSLNYlvmNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLP 217
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGlYFLGGGTFDL---LELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLP 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNP-TTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:TIGR01972 228 DAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   297 VIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLI 376
Cdd:TIGR01972 308 VLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFV 387
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   377 GELFVIMASFSWSNVTITMTGLNMLITALYSLYMLTMTQRGKFTYHIHNIKPS-YTRENTLMSMHMLPLIMLTFNPKIIM 455
Cdd:TIGR01972 388 GEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDlNGREIAVLAPLVVLILFLGLYPNPLL 467

                  ....
gi 46403546   456 GLTY 459
Cdd:TIGR01972 468 DLTE 471
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
112-398 3.96e-62

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 203.70  E-value: 3.96e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   112 ATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWS 191
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   192 SNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFIMLCLWGMIM 271
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMLLARGLQA 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 46403546   351 FLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
 
Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 770.60  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00110   1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   81 QHHLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110  81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  161 LVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  241 YGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 46403546  401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGLTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
ND4 MTH00124
NADH dehydrogenase subunit 4; Provisional
1-456 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214427 [Multi-domain]  Cd Length: 457  Bit Score: 607.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00124   1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   81 QHHLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00124  81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  161 LVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  241 YGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 46403546  401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
1-457 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 570.70  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00068   1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   81 QHHLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00068  81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  161 LVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  241 YGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 46403546  401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGL 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
1-458 2.09e-176

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 502.18  E-value: 2.09e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFF-SDSLSSPLLMLTVWLLPLMIMA 79
Cdd:MTH00127   1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   80 SQHHLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00127  81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  160 LLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  240 GYGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  320 GLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 46403546  400 MLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGLT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
3-454 1.69e-155

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 448.62  E-value: 1.69e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    3 KIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFFS-DSLSSPLLMLTVWLLPLMIMASQ 81
Cdd:MTH00206   1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSyDPLSSPLVILSCWLLPLMFLASQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   82 HHLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:MTH00206  81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  162 VALIYVQISLGSLNYLVMNMwfqDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  242 GMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  322 TSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|...
gi 46403546  402 ITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKII 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
1-455 2.16e-150

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 435.94  E-value: 2.16e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNS-NNFSLTFFSDSLSSPLLMLTVWLLPLMIMA 79
Cdd:MTH00044   1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSwHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   80 SQHHLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00044  81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  160 LLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  240 GYGMLRLTIILN-PTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 46403546  399 NMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
1-457 3.78e-116

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 347.91  E-value: 3.78e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNStmiWINMTSCSLMINLMTLPLLNQaGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00163   1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSL-SFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   81 QhhLMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00163  77 E--SVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  161 LVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNllwlacIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLSM------ILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  241 YGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 46403546  401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGL 457
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
37-457 2.12e-113

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 339.89  E-value: 2.12e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   37 MTLPLLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHhlMKESLTRKKLYLSMLISLQMFLIMTFSATELI 116
Cdd:MTH00150   1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  117 LFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLlw 196
Cdd:MTH00150  79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGL-- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  197 lACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSIC 276
Cdd:MTH00150 157 -LVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  277 LRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMA 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  357 TWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTL 436
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
                        410       420
                 ....*....|....*....|.
gi 46403546  437 MSMHMLPLIMLTFNPKIIMGL 457
Cdd:MTH00150 396 LLLHWVPLLLLILKSDLLFMW 416
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
5-455 7.22e-104

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 316.54  E-value: 7.22e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    5 IIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHL 84
Cdd:MTH00205   2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   85 MKESltRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVAL 164
Cdd:MTH00205  82 KSNK--NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  165 IYVQISLGSLNylvMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGML 244
Cdd:MTH00205 160 FFLNSLNFSLS---MFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  245 RLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSS 324
Cdd:MTH00205 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  325 MLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNMLITA 404
Cdd:MTH00205 317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 46403546  405 LYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIM 455
Cdd:MTH00205 397 AYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
1-454 1.48e-100

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 308.21  E-value: 1.48e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    1 MLKIIIPTIMLFPVIWYSNSTmIWINMTSCSLMINLMTLPLLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00014   1 MLKLIMPLISLLLLPLIKYPW-SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   81 QHHLMKESLTrkKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00014  80 FKIFQNNKAP--KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  161 LVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWlacIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWWLIT---ILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  241 YGMLRLTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....
gi 46403546  401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKII 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
59-458 1.31e-80

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 257.70  E-value: 1.31e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  59 DSLSSPLLMLTVWLLPLMIMASqhhlMKESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGN 138
Cdd:COG1008  81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 139 QtERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLvMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFD-IAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNP-TTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 298 IVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 378 ELFVIMASFSWSNVTITMTGLNMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGL 457
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDL 474

                .
gi 46403546 458 T 458
Cdd:COG1008 475 I 475
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
59-454 1.49e-71

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 234.33  E-value: 1.49e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   59 DSLSSPLLMLTVWLLPLMIMASQHHLMKesltRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGn 138
Cdd:PRK05846  81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  139 QTERLNAGLYFLFYTLIGSLPLLVALIYV----QISLGSLNYLVmnmWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIAD---LLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNP-TTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  294 MALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  374 NLIGELFVIMASFSWSNVTITMTGLNMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKI 453
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472

                 .
gi 46403546  454 I 454
Cdd:PRK05846 473 L 473
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
59-459 3.19e-71

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 232.91  E-value: 3.19e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546    59 DSLSSPLLMLTVWLLPLMIMASQHHLMKesltRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGN 138
Cdd:TIGR01972  76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   139 QTeRLNAGLYFLFYTLIGSLPLLVALIY-VQISLGSLNYlvmNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLP 217
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGlYFLGGGTFDL---LELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLP 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNP-TTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:TIGR01972 228 DAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   297 VIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLI 376
Cdd:TIGR01972 308 VLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFV 387
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   377 GELFVIMASFSWSNVTITMTGLNMLITALYSLYMLTMTQRGKFTYHIHNIKPS-YTRENTLMSMHMLPLIMLTFNPKIIM 455
Cdd:TIGR01972 388 GEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDlNGREIAVLAPLVVLILFLGLYPNPLL 467

                  ....
gi 46403546   456 GLTY 459
Cdd:TIGR01972 468 DLTE 471
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
53-410 5.63e-65

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 216.84  E-value: 5.63e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   53 SLTFFSDSLSSPLLMLTVWLLPLMIMASQH---HLMKEsltrkklYLSMLISLQMFLIMTFSATELILFYILFEATLIPT 129
Cdd:MTH00217  73 PVVFAVDGISIFFLILTALLTPICILISWNsikFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPM 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  130 LIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNY-----LVMNMWFQdmssswssNLLWLACIMAFM 204
Cdd:MTH00217 146 FLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYqalccLKIEKELQ--------YFIFLGFFLSLA 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFIM-LCLWGMIMTSSICLRQTDLK 283
Cdd:MTH00217 218 IKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLK 297
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  284 SLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLAS 363
Cdd:MTH00217 298 RIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLV 377
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 46403546  364 LTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNMLITALYSLYM 410
Cdd:MTH00217 378 LANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
53-410 1.44e-64

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 215.70  E-value: 1.44e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   53 SLTFFSDSLSSPLLMLTVWLLPLMIMASQH---HLMKEsltrkklYLSMLISLQMFLIMTFSATELILFYILFEATLIPT 129
Cdd:MTH00204  76 PLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPM 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  130 LIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMnmwFQDMSSSWSSNLLWLACIMAFMVKMPL 209
Cdd:MTH00204 149 FLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL---LNIKLPLSIQKWLLVGFFLSLAVKIPQ 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  210 YGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFI-MLCLWGMIMTSSICLRQTDLKSLIAY 288
Cdd:MTH00204 226 IPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIvMLSVIAVIYGSLTTCRQVDFKRLIAY 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  289 SSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLA 368
Cdd:MTH00204 306 SSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMG 385
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 46403546  369 LPPFINLIGELFVIMASFSWSNVTITMTGLNMLITALYSLYM 410
Cdd:MTH00204 386 FPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
112-398 3.96e-62

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 203.70  E-value: 3.96e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   112 ATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWS 191
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   192 SNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFIMLCLWGMIM 271
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMLLARGLQA 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 46403546   351 FLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
54-409 1.30e-58

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 200.53  E-value: 1.30e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   54 LTFFSDSLSSPLLMLTVWLLPLMIMASQHHLmkeSLTRKKLYLSMLIsLQMFLIMTFSATELILFYILFEATLIPTLIII 133
Cdd:MTH00226  96 LVFAVDGISIYFIILTGFIVPCSILISWHSV---KYLTKSFLICMLI-LEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  134 TRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMnMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLH 213
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL-ASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFH 250
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTI-ILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWpILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  293 HMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPF 372
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 46403546  373 INLIGELFVIMASFSWSNVTITMTGLNMLITALYSLY 409
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
59-457 4.51e-44

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 161.35  E-value: 4.51e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   59 DSLSSPLLMLTVWLLPLMIMASQhhlmkeSLTRK-KLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWG 137
Cdd:PRK12561  58 DGLSMPLVLLSGLITTLSIFASW------KVTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWG 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  138 NQtERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDmSSSWSSNLLWLACIMAFMVKMPLYGLHLWLP 217
Cdd:PRK12561 132 GQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKS-YPLALELLLYAGFLIAFGVKLPIFPLHTWLP 209
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYP-FIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK12561 210 DAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGF 289
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  297 VIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLI 376
Cdd:PRK12561 290 VLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFV 369
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  377 GELFVIMA-------SFSWSNVTITMTGLNMLITALYSLYMLTMTQRGKFTYHIH------NIKPsytRENTLMSMHMLP 443
Cdd:PRK12561 370 SELTVFLGitssdvySSTFRTITILLAAVGLILTPIYLLSMLRRVFYGPRSELLPalavveDAKP---RELFIALSLLVP 446
                        410
                 ....*....|....
gi 46403546  444 LIMLTFNPKIIMGL 457
Cdd:PRK12561 447 IIGIGFYPKLATQL 460
ND4 MTH00094
NADH dehydrogenase subunit 4; Provisional
47-447 5.08e-44

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177157 [Multi-domain]  Cd Length: 403  Bit Score: 158.92  E-value: 5.08e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   47 NNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMasqhhlMKESLTRKKLYLSMLIslqMFLIMTFSATELILFYILFEATL 126
Cdd:MTH00094  25 NNYSWSGLFFFFDSFVFVLLIFMMVFILGLVL------LSEKNFNLLILSNLLI---LICLLFFVSSNMLMLYMFFELSM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  127 IPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYvqislgslNYLVMNMWFQDMSSSWSSNLLWlacIMAFMVK 206
Cdd:MTH00094  96 FPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCYFDFFLSWEMFFIL---SLSFMMK 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  207 MPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRltiILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLI 286
Cdd:MTH00094 165 FPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLA 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  287 AYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTN 366
Cdd:MTH00094 242 AYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSN 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  367 LALPPFINLIGELFVIMASFSWSNVTITMTGLNMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIM 446
Cdd:MTH00094 322 SGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWLSL 401

                 .
gi 46403546  447 L 447
Cdd:MTH00094 402 F 402
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
59-430 1.97e-42

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 156.78  E-value: 1.97e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   59 DSLSSPLLMLTVWLLPLMIMASQhhlmkESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK06473  78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  139 QtERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYlVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSF-DYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPD 230
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  219 AHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFimLCLWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  296 LVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGL---QAFLPLMATWWLLASLTNLALPPF 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 46403546  373 INLIGELFVIMASFswsNVTITMTGLNMLITALYSLYMLTMTQR---GKFTYHIHNIKPSY 430
Cdd:PRK06473 389 VGFIAEFLVFRGSF---PIFPVQTLLCMIGTGLTAVYFLLLVNRvffGRLTAELSNLPRVL 446
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
52-387 4.21e-39

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 146.45  E-value: 4.21e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  52 FSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLMKESltRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLI 131
Cdd:COG0651  68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 132 IITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACImAFMVKMPLYG 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLV-GFGIKAALFP 223
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFIMLCLWG--MIMTSSICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLGTLLLVLGLltMLVGALGALAQRDLKRLLAYS 303
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 290 SVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLAL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
                       330
                ....*....|....*...
gi 46403546 370 PPFINLIGELFVIMASFS 387
Cdd:COG0651 384 PPLSGFVSKWLLLQAALE 401
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
58-454 5.04e-35

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 136.76  E-value: 5.04e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   58 SDSLSSPLLMLTVWLLPLMIMASQHHLMKesltrKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWG 137
Cdd:PRK02546  85 ADGLSMPLILLTGFITTLAVLAAWPVTFK-----PKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  138 NQtERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWlACIMAFMVKMPLYGLHLWLP 217
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYA-GLLIAYGVKLPIVPLHTWLP 237
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYP-FIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  297 VIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLI 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  377 GELFVIMA-------SFSWSNVTITMTGLNMLITALYSLYMLTMTQRGK----FTYHiHNIKPSYTRENTLMSMHMLPLI 445
Cdd:PRK02546 398 AELMVFVGfatsdayTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPenkeLVSH-EKLVDAEPREVFIIACLLVPII 476

                 ....*....
gi 46403546  446 MLTFNPKII 454
Cdd:PRK02546 477 GIGLYPKLV 485
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
59-418 4.02e-33

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 130.99  E-value: 4.02e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   59 DSLSSPLLMLTVWLLPLMIMASQhhlmkESLTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK07363  78 DGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  139 QtERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWlACIMAFMVKMPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLT-GLLLGFGIKIPLVPLHTWLPD 230
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  219 AHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPfiMLCLWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  296 LVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQA---FLPLMATWWLLASLTNLALPPF 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGMASAGIPGL 388
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 46403546  373 INLIGELFVIMASFSWSNVTITMTGLNMLITALYSLYMLTMTQRGK 418
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGR 434
ndhD CHL00011
NADH dehydrogenase subunit 4
59-457 1.32e-32

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 129.29  E-value: 1.32e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   59 DSLSSPLLMLTVWLLPLMIMASQhhlmkeSLTR--KKLYLSMLI--SLQmflIMTFSATELILFYILFEATLIPTLIIIT 134
Cdd:CHL00011  83 DGLSIGPILLTGFITTLATLAAW------PVTRnsRLFYFLMLAmySGQ---IGLFSSRDLLLFFIMWELELIPVYLLLS 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  135 RWGNQtERLNAGLYFLFYTLIGSLPLLVALIyvQISLGSLNYLVMNmwFQDMSS----SWSSNLLWLACIMAFMVKMPLY 210
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVL--GMGLYGSNEPTLN--FETLANqsypVALEILFYIGFLIAYAVKLPII 228
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFIMLC-LWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVgAIQIIYAASTSLGQRNLKKRIAYS 308
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  290 SVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsRTMLLAR--GLQAFLPLMATWWLLASLTNL 367
Cdd:CHL00011 309 SVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASL 386
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  368 ALPPFINLIGELFV---IMASFSWSN-----VTITMtGLNMLITALYSLYMLTMTQRGkftYHIHNIKPSY-----TREN 434
Cdd:CHL00011 387 ALPGMSGFVAELIVffgIITSQKYLLmpkilITFVM-AIGMILTPIYLLSMLRQMFYG---YKLFNVPNSYffdsgPREL 462
                        410       420
                 ....*....|....*....|...
gi 46403546  435 TLMSMHMLPLIMLTFNPKIIMGL 457
Cdd:CHL00011 463 FISICILLPVIGIGIYPDFVLSL 485
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
53-387 6.91e-24

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 103.81  E-value: 6.91e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   53 SLTFFSDSLSSPLLMLT--VWLLPLMIMASQHHlmkeslTRKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTL 130
Cdd:PRK08375  70 GIELRADSLSALFLLVTsiLAIAALLYAIGYGE------HRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSY 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  131 IIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLwlaCIMAFMVKMPLY 210
Cdd:PRK08375 144 ALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFGF---VLLALALKAAVF 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTI----ILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLI 286
Cdd:PRK08375 220 PLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVL 299
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  287 AYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTN 366
Cdd:PRK08375 300 AYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSL 379
                        330       340
                 ....*....|....*....|.
gi 46403546  367 LALPPFINLIGELFVIMASFS 387
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVVGAVE 400
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
59-379 1.90e-22

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 100.05  E-value: 1.90e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   59 DSLSSPLLMLTVWLLPLMIMASQHHLMKESLtrKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12667  81 DLLGALLGLLTALVMFLILIYSYWYLEHESG--PEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  139 QTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLN-----YLVMNMWFQDMSSSWSSNLLWLACIMA-----FMVKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNmadlsAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTIKAA 238
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  209 LYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRL-------TIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  282 LKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
                        330
                 ....*....|....*...
gi 46403546  362 ASLTNLALPPFINLIGEL 379
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKL 416
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
206-447 1.93e-20

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 93.46  E-value: 1.93e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFIMLC--LWGMIMTSSICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfgLLSVLVAAFFLLRQRDIK 306
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  284 SLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  364 LTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNMLITALYSLYMltMTQRGKFTYHIHNIKPSYTRENTLMSMHMLP 443
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVR--RVAGMVFGEPPEAVNRGDLGWLTTSPMFVHL 464

                 ....
gi 46403546  444 LIML 447
Cdd:PRK06458 465 VLVL 468
Oxidored_q5_N pfam01059
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
1-109 3.07e-19

NADH-ubiquinone oxidoreductase chain 4, amino terminus;


Pssm-ID: 366442 [Multi-domain]  Cd Length: 110  Bit Score: 82.96  E-value: 3.07e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546     1 MLKIIIPTIMLFPVIWYSNSTMIWINMTSCSLMINLMTLPLLNQAGNNS-NNFSLTFFSDSLSSPLLMLTVWLLPLMIMA 79
Cdd:pfam01059   1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSwSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
                          90       100       110
                  ....*....|....*....|....*....|
gi 46403546    80 SQHHLMKESLTRKKLYLSMLISLQMFLIMT 109
Cdd:pfam01059  81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
ND4 MTH00062
NADH dehydrogenase subunit 4; Provisional
22-393 1.09e-17

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214413 [Multi-domain]  Cd Length: 417  Bit Score: 84.59  E-value: 1.09e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   22 MIWINMTSCSLMINLMTLPLLNQAG------NNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLMkeSLTRKKLY 95
Cdd:MTH00062   1 FYFFSVGFFLGFLLLLLFCLLYSSGvgccilVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLS--GVSRFFLF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   96 LSMLislqmFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLN 175
Cdd:MTH00062  79 LSLI-----FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  176 YLVMNmwfqdmSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTk 255
Cdd:MTH00062 154 FSDWG------SDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGS- 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  256 IMAYPFIMLCLWGMIMTSSicLRQTDLKSLIAYSSVSHMaLVIVAILMQTPWSFMGATALM-IAHGLTSSMLFCLANSNY 334
Cdd:MTH00062 227 FLGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFY 303
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 46403546  335 ERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTI 393
Cdd:MTH00062 304 EVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLL 362
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
52-412 2.33e-15

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 78.62  E-value: 2.33e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   52 FSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLMKESLTRKKLYLSMLISLQMF-LIMTFSATELILFYILFEATLIPTL 130
Cdd:PRK08667  69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  131 IIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVmnmwfqDMSSSWSSNLLWLACIMAFMVKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSP------LGASAGILSLVFLLLFLGFGIKAGII 222
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLR-LTIILNPTtkiMAYPFIMLCLwGMI---MTSSICLRQTDLKSLI 286
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRfLMDVLSPE---LWWGVLILLA-GSIsalLGVIYALKEHDLKGLL 298
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  287 AYSSVSHMALVIVAILMQTPWSFMGATALM-----------IAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLM 355
Cdd:PRK08667 299 AYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYT 378
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 46403546  356 ATWWLLASLTNLALPPFINLIGELFVIMASFswSNVTITMTGLNMLITALYSLYMLT 412
Cdd:PRK08667 379 SALFLVGAVSIAALPPFNGFASELLLYESFF--QSFSVADPLIKILLFSVLAIFALT 433
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
47-327 6.77e-15

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 76.96  E-value: 6.77e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   47 NNSNNFSLTFFSDSLSSPLLMLTvwllpLMIMASQHHLMKESLTRKKLYLSMLISLQMF-LIMTFSATELILFYILFEAT 125
Cdd:PRK08668  56 LFFGGFKLTFTLTHLSWFFAMIS-----LLVIFSVAFFMVSEKTKNDAYFNMFALMSLAgVLGVFLANDLLTLYIFWEIM 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  126 LIPTLIIITRwGNQTERLNAGLYFLFyTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMV 205
Cdd:PRK08668 131 TFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAFGVA 208
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLrLTIILNPTTKIMA------------YPFIMLCLWGMIMTS 273
Cdd:PRK08668 209 KAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKLFSefgtyrgvplfnYILAWLGNISIIVGT 287
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 46403546  274 SICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK08668 288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
102-408 9.64e-14

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 72.87  E-value: 9.64e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  102 LQMFLIMTFSATELILFYILFE-ATLIPTLIIITRwgNQTERLNAGLYFLFYTLIGSLPLLVALIYV------QISLGSL 174
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFIASTAMIFAFIGLIFLfsltrqALGTGTL 188
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  175 NYLVMNMWFQDMSSSWSSNLLWLACImAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNpTT 254
Cdd:PRK08676 189 NWTELAAHASLLSPSVLGASFLFIFI-GFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLR-QS 266
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  255 KIMAYPFIMLCLWGMIMTSSIC---LRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLAN 331
Cdd:PRK08676 267 GAAEQFSNVLIGLGIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAG 346
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 46403546  332 SNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSnVTITMTGLNMLITALYSL 408
Cdd:PRK08676 347 ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGIS-VWLVLAVLLLLLLAASSF 422
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
115-431 2.15e-13

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 72.11  E-value: 2.15e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 115 LILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTL 212
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 195 LWLACIMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTIILNPTTkiMAYPFIMLC-LWGMIMT 272
Cdd:COG1009 213 ILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFALSP--VWLTVVAIIgAITALFA 289
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 273 SSICLRQTDLKSLIAYSSVSHMALVIVAILMQtpwSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFL 352
Cdd:COG1009 290 ALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKM 366
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 353 PLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNML---ITALYSLYMLTMT----QRGKFTYHIHN 425
Cdd:COG1009 367 PITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPKTPKHPHE 446

                ....*.
gi 46403546 426 IKPSYT 431
Cdd:COG1009 447 SPWLMT 452
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
104-387 1.27e-12

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 69.41  E-value: 1.27e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  104 MFLIMTFSATELIL------FYILFEATLIpTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYL 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  178 VMNMWFQDMSSSWSSNLLWLaCIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIIL---NPTT 254
Cdd:PRK08377 192 HIAQLAGTIDPTVAQVGLAL-LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMqnaNGWS 270
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  255 KIMAYPFIMLCLwGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNY 334
Cdd:PRK08377 271 SVLKLVIIMATL-TVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVG 349
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 46403546  335 ERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFS 387
Cdd:PRK08377 350 ITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
108-384 1.42e-12

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 69.61  E-value: 1.42e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  108 MTFSATELILFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMS 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  188 SSWSSNLLWLAcIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAypFIMLC-L 266
Cdd:PRK12665 205 SGTRTALFAVL-LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDT--LLMVVaL 281
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  267 WGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLAR 346
Cdd:PRK12665 282 LTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLG 361
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 46403546  347 GLQAFLPLMATWWLLASLtNLA-LPPFINLIGELFVIMA 384
Cdd:PRK12665 362 GLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEA 399
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
51-339 1.50e-12

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 69.21  E-value: 1.50e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   51 NFSLTFFSDSLSSPLLMLT--VWLlplmimASQHHLMKESLTRkklYLSM-LISLQMFLIMTFSATELILFYILFEATLI 127
Cdd:PRK07234  58 NFGVTLRADALSGYFILTNalVTL------AVIFYCWESAKTR---FFYAqLLILHGSVNAAFVCADLISLYVALEVLSI 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  128 PTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNylvmnmwFQDMSSSWSSNLLWLAciMAFMVKM 207
Cdd:PRK07234 129 ATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFA-------FSGLATADPEAFALIA--LGLLVKG 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  208 PLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTKIMAYPFIMLCLWGmimtSSICLRQTDLKSLIA 287
Cdd:PRK07234 199 GIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLA 274
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 46403546  288 YSSVSHMALVIVAILMqtpwsfmgATALMIAHGLTSSMLFCLANSNYERIHS 339
Cdd:PRK07234 275 FSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFT 318
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
91-401 3.04e-11

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 65.00  E-value: 3.04e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   91 RKKLYLSMLISLQMFLIMTFSATELILFyILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIYVQIS 170
Cdd:PRK06525 112 TGRYYAFLLLFIGAMAGLVYSSTLLGLL-LFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQ 189
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  171 LGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAfmVKMPLyglHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTII 249
Cdd:PRK06525 190 TGTFALSALSGLHGSLKYLVFLGILFAAWGKS--AQLPF---YSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQS 263
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  250 LNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI---LMQTPWSFMGATALMIAHGLTSSML 326
Cdd:PRK06525 264 MGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLslaILGSRLALEGSIAYIFNHAFAKSLF 343
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 46403546  327 FCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNML 401
Cdd:PRK06525 344 FLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
20-412 3.35e-11

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 64.97  E-value: 3.35e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   20 STMIWINMTSCSLMINLMTL-------PLLNQAGNNSNNFSLTFFSDSLSSpLLMLTVWLLPLMIMASQHHLMKESLTRK 92
Cdd:PRK12663  30 QRYLAIGTLTILTLISLALLiyvqrhgPITLDFGGWLPPFGIQFTGDSLSA-LMVTTASFVATAIMAYGFGDIEHSGRRY 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   93 KLYlSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLG 172
Cdd:PRK12663 109 GFP-PFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFG 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  173 SLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNP 252
Cdd:PRK12663 187 TLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFP 265
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  253 TTKIMAYPFI--MLCLwGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12663 266 QERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIA 344
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  331 NSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTglnMLITALYSLYM 410
Cdd:PRK12663 345 GSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLAL---MLITSLITMYS 421

                 ..
gi 46403546  411 LT 412
Cdd:PRK12663 422 LF 423
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
213-405 4.29e-11

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 65.33  E-value: 4.29e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  213 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTIILNPTtkimAYPFIMLCLWG---MIMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLGGT----PLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  289 SSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 46403546  369 LPPFINLIGELFVIMASFSWSNVTITMTGLNMLITAL 405
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNAL 406
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
47-411 9.97e-11

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 63.68  E-value: 9.97e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   47 NNSNNFSLTFFSDSLSSPLLMLT--VWLLPLM-IMASQHHLMKESLTRKKLYLSMLISLQMFLIMTfsaTELILFYILFE 123
Cdd:PRK06589  70 MDFGNYSIGLHLEPLGLIFLLLIgfLWICALLyTPKYLAINNIDSSSRFLFFFNLTILIGVLIALS---SDLFTMFVCYE 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  124 ATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPL-LVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNllwlacIMA 202
Cdd:PRK06589 147 LLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLM------FIY 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  203 FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTII---LNPTTKI--MAYPFIMLCLWGMIMTSSICL 277
Cdd:PRK06589 220 GIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKAL 299
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  278 RQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMAT 357
Cdd:PRK06589 300 KTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISF 379
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 46403546  358 WWLLASLTNLALPPFINLIGELFVIMASFSWSNVT--ITMTGLNMLITALYSLYML 411
Cdd:PRK06589 380 IISISSLSLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYLL 435
PRK12650 PRK12650
DUF4040 family protein;
112-330 1.56e-10

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 63.52  E-value: 1.56e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  112 ATELILFYILFEATLIPTLIIITRWGNQTErlNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNY---LVMNMWFQDMSS 188
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLsgiLHSDVWAEKPGL 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  189 SWSSNLLWLaciMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTIILNPTTkIMAYPFIMLCLWG 268
Cdd:PRK12650 207 TTVVAVLIA---VAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVA-VWNWLLIIVGMIT 282
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 46403546  269 MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12650 283 ALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
63-372 1.91e-09

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 59.73  E-value: 1.91e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   63 SPLLMLTVWLLPLMIMASQHHLMKESLTRKKLY-LSMLISLQMFLIMTfsATELILFYILFEATLIPTLIIITRWGNQTE 141
Cdd:PRK08376  92 GAFMALIATIVSFLAVLYSISYMKHDTGLDKYYtLILLLELGMLGMAI--TGDLFNFFVFLEIMSIASYALVAFRNDTWE 169
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  142 RLNAGLYFLFYTLIGSLPLL--VALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLAcimAFMVKMPLYGLHLWLPKA 219
Cdd:PRK08376 170 AIEAGIKYMFVGSLASSMVLlgIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALFIA---GLAMKSGAVPVHMWLPDA 246
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  220 HVEAPIAGSMVLaaVLLKLGG-YGMLRLTI-ILNPTTKIMAYPFIMLCL--WGMIMTSSICLRQTDLKSLIAYSSVS--- 292
Cdd:PRK08376 247 YPAAPSSISAML--LVIKQAGlYALARVLFsIYGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSVSqig 324
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  293 HMAL---VIVAILMQTPWSFMGATAL------MIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLAS 363
Cdd:PRK08376 325 YMLLglgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGA 404

                 ....*....
gi 46403546  364 LTNLALPPF 372
Cdd:PRK08376 405 AAIVGLPPF 413
PRK12646 PRK12646
DUF4040 family protein;
86-419 2.03e-09

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 59.77  E-value: 2.03e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   86 KESLTRKKLYLsMLISLQMFLIMTFSATelILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALI 165
Cdd:PRK12646 106 KDNLPRFYFYL-TLFMFSMIGIVLSDNT--ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFI 182
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  166 YVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGML 244
Cdd:PRK12646 183 MLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLF 261
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  245 RLTIILNpTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI-----LMQTPWSFMGATALMIA- 318
Cdd:PRK12646 262 RFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLf 340
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  319 --------HGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTnLALPPFIN--LIGELF-------V 381
Cdd:PRK12646 341 aalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMFldaltqtG 419
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 46403546  382 IMASFSWSnVTITMTGLNM---LITALYSLYMLTMTQRGKF 419
Cdd:PRK12646 420 QLSQFSLI-SMIIIVFIGViasIFTFTYALYMVKEVFWGKY 459
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
212-372 2.41e-09

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 59.52  E-value: 2.41e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTI-ILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK06521 229 LHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  291 VSHMALVIVA-----ILMQTPWSFMGATALMIA------HGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWW 359
Cdd:PRK06521 309 IENIGIIFVGlglamVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAF 388
                        170
                 ....*....|...
gi 46403546  360 LLASLTNLALPPF 372
Cdd:PRK06521 389 LIGCLAISALPPL 401
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
52-408 3.66e-09

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 58.81  E-value: 3.66e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   52 FSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLMKEsltRKKLYLSMLIslqMFLIM----TFSATELILFYILFEATLI 127
Cdd:PRK07691  69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLM 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  128 PTLIIITRWGNQTErLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLAC--IMAFMV 205
Cdd:PRK07691 143 ASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIlfLFVFAT 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLR-LTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKS 284
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARtFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  285 LIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASL 364
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAAL 381
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 46403546  365 TNLALPPFINLIGELFVIMASFSWSNVTITMTGLNMLITALYSL 408
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
119-447 5.41e-08

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 55.13  E-value: 5.41e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  119 YILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  199 CIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTII-----LNPTTKIMAYPFIMLCLWGMIMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGS 294
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  274 SICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLP 353
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMP 374
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  354 LMATWWLLASLTNLALPPFINLIGELFV---IMASFSWSNVTITMTGlnmliTALYSLYMLTMTQRGKFtyhihniKPSY 430
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYIldaFIKSNAWIGLVVLLVG-----SGLSVIYVWKIVEALYF-------ESRM 442
                        330
                 ....*....|....*..
gi 46403546  431 TRENTLMSMHMLPLIML 447
Cdd:PRK12662 443 VESKANDKAFKTPNAMV 459
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
41-408 2.61e-07

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 52.81  E-value: 2.61e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  41 LLNQAGNNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLMKESLTRKKLYLSMLISL--QMFLImtfSATELILF 118
Cdd:COG1007  51 LLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATlgMMLMA---SANDLLTL 127
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 119 YILFEATLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLPLL-VALIYVqiSLGSLNYLVMNMWFQDMSSSWSSNLLW 196
Cdd:COG1007 128 FLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLYG--ATGSLNLAGIAAALAAGGANSPLLLLG 205
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 197 LACIMA-FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGML-R-LTIILNPTTKIMAYPFIMLCLWGMIMTS 273
Cdd:COG1007 206 LVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAALlRlLVEAFPGLAADWQLLLAVLAVLSMTVGN 284
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546 274 SICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLF-CLANSNYERIHSRTMLLARGLQAFL 352
Cdd:COG1007 285 LAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRS 364
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 46403546 353 PLMAtWWLLASLTNLA-LPPFINLIGELFVIMASFSWSNVTITMTG-LNMLITALYSL 408
Cdd:COG1007 365 PLLA-LAMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIAvLNSVISAYYYL 421
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
136-327 2.87e-06

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 49.51  E-value: 2.87e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  136 WGNQTER-LNAGL-YFLFYTLIGSLpLLVALIYVQISLGSLnylvmnmwfqDMSSSWSSNLLWLACIM-AFMVKMPLYGL 212
Cdd:PRK12668 134 WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSF----------AFGAIAGLGGTAAWLILiGFGVNAAFPPL 202
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  213 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTiilnPTTKIMAYPFIMLCLWGMIMTssicLRQTDLKSLIAYSSVS 292
Cdd:PRK12668 203 HAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF----PGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVS 274
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 46403546  293 HMALVIVAILMQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 275 QVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
155-386 3.81e-06

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 49.44  E-value: 3.81e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  155 IGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFMVKMPLYGlhlWLPKAHVEAPIAGSMVLAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHG---WVPQAHANASAPAAALFSTV 221
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  235 LLKLGGYGMLRLTIIlnpTTKIMAYPFIMLCLWGMImTSSI----CLRQTDLKSLIAYSSVSHMALV-------IVAILM 303
Cdd:PRK08042 222 VMKIGLLGILTLSLL---GGNAPLWWGVALLVLGMI-TAFVgglyALMEHNIQRLLAYHTLENIGIIllglgagVTGIAL 297
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  304 QTP----WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGEl 379
Cdd:PRK08042 298 EQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGE- 376

                 ....*..
gi 46403546  380 FVIMASF 386
Cdd:PRK08042 377 WVIYQSF 383
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
212-327 1.44e-05

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 47.61  E-value: 1.44e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  212 LHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTIILNpTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK12644 222 FHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFA-DVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGT 299
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 46403546  291 VSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 300 VSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
23-307 3.91e-05

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 46.12  E-value: 3.91e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   23 IWINMTSCSLMINLmtlplLNQAGNNSNNFSLTFFSDSLSspLLMLTVWLL-PLMIMASQHHLMKESLTRKKLYLSMLIS 101
Cdd:MTH00208  75 IWILLGCPNINISL-----SNWLSNTLFNFSLSFIFDFYF--ILFFSVALFvTWSIIEFSHYYMSNDPNKNAFFRLLIIF 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  102 LQMFLIMTfSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNylVMNM 181
Cdd:MTH00208 148 LLNMLILT-SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWN--LNEI 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  182 WFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMLRLTIILNPTT 254
Cdd:MTH00208 225 LSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSP 297
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 46403546  255 KIMAYPFIMLCLWGmIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPW 307
Cdd:MTH00208 298 WFLSLCLILGSLTA-LFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN 349
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
199-419 7.98e-05

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 45.01  E-value: 7.98e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  199 CIMAF---MVKMPLYGLHLWLPKAhVEAPI-------AGSMVLAAVLLklggygMLRLTIILNPttkimaYPFIMLCL-W 267
Cdd:PRK07376 230 CILVFlgpMAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL------VARMYPVFEQ------FPAVMTVIaW 296
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  268 GMIMTS----SICLRQTDLKSLIAYSSVSHMALVIVAilmqtpwsfMGATAL------MIAHGLTSSMLFCLANS----- 332
Cdd:PRK07376 297 TGAITAflgaSIALTQNDIKKGLAYSTISQLGYMVMA---------MGCGAYsaglfhLMTHAYFKAMLFLGSGSvihgm 367
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  333 ----NYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTITMTGLNMLITALYSL 408
Cdd:PRK07376 368 eevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMF 447
                        250
                 ....*....|.
gi 46403546  409 YMLTMTQRGKF 419
Cdd:PRK07376 448 RMYFLTFEGEF 458
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
59-393 1.05e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 44.56  E-value: 1.05e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   59 DSLSSPLLMLTVWLLPLMIMASQHHLMKES-LTRKKLYLSMLISLQMFLIMTFSATELilfYILFEATLIPTLIIITRWG 137
Cdd:MTH00032  79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLVTSDNYLQL---FIGWEGVGVCSYLLVAFWT 155
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  138 NQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWF--------------QDMSSSWSSNLLWLACIMAF 203
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSvgsgimdrgyygggAYESPLAPFAIIGILLLIGC 235
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  204 MVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTiilnPTTKIMAYPFIMLCLWGMI---MTSSICLRQT 280
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  281 DLKSLIAYSSVSHMALVIVAILMQTpwSFMGATALMIAHGLTSSMLFCLANSnyeRIHSRT-----MLLARGLQAFLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGS---VIHSTTvdeqdMRKMGGLIHSIPFT 386
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 46403546  356 ATWWLLASLTNLALPPFINLIGELFVIMASFSWSNVTI 393
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
53-371 1.23e-04

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 44.43  E-value: 1.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   53 SLTFFSDSLSSpLLMLTVWLLPLMIMASQHHLM--KESLTRKKLYLsmLISLQMFLIMTFSATELILFyILFEATLIPTL 130
Cdd:PRK12649  73 EFSIYADGLAV-LIGLIASGIGVIIMSYSNGYMshKEDLPRYYQYL--LLFMGSMIGMVFSGNTIQLF-IFWELTSITSF 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  131 IIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLVMNMWFQDMSSSWSSNLLWLACIMAFM---VKM 207
Cdd:PRK12649 149 MLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKS 228
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  208 PLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTIILNPTTKImaypFIMLCLWGMI---MTSSICLRQTDLK 283
Cdd:PRK12649 229 AQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFSGTEAW----FILVSGTGMItmvLAGFLAFRQTDIK 303
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  284 SLIAYSSVSHMALVIVAILMQTP----WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWW 359
Cdd:PRK12649 304 AILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVA 383
                        330
                 ....*....|..
gi 46403546  360 LLASLTNLALPP 371
Cdd:PRK12649 384 SIAALAMAGIPP 395
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
99-384 2.43e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 43.10  E-value: 2.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   99 LISLQMFLIMtfSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSLNYLV 178
Cdd:MTH00196   1 MVALGILCLI--SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  179 MNMWFQDMSSSWSSNLLWLAC--IMAFMVKMPLYGLHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMLRLTIILNPTTKI 256
Cdd:MTH00196  79 INLVLNSGQSFSSVSVPIGYLliIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  257 maypFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFC--LANSNY 334
Cdd:MTH00196 155 ----LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSiiLALNVY 230
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 46403546  335 erihsRTMLLA-RGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMA 384
Cdd:MTH00196 231 -----KNLIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLS 276
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
213-387 4.51e-04

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 42.50  E-value: 4.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  213 HLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-LR-LTIILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRlLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  291 VSHMALVIVAILMQTPWSFMGATALMIAHGLTS----SMLFCLANSNYERIHSRTMllaRGLQAFLPLMATWWLLASLTN 366
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTlgafGVISLLRRKGGEAESISDF---AGLSKRSPLLAAVMTIFMLSL 379
                        170       180
                 ....*....|....*....|.
gi 46403546  367 LALPPFINLIGELFVIMASFS 387
Cdd:PRK05777 380 AGIPPTAGFWGKFYVFEAAVE 400
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
262-387 4.90e-04

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 42.33  E-value: 4.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  262 IMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 46403546  342 MLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFS 387
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQ 395
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
91-327 8.72e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 41.86  E-value: 8.72e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   91 RKKLYLSMLISLQMFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQIS 170
Cdd:MTH00211 108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLN 187
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  171 LGSLNYlvmnmwFQDMSSSWSSNLLWLACIMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygM 243
Cdd:MTH00211 188 LNSWEI------SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------L 254
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  244 LRLTIILNPTTKIMAypfIMLCLWG--MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI-LMQTPWSFMgataLMIAHG 320
Cdd:MTH00211 255 IRLSPLFQNNQLILG---AVLLLGAltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLgLNQPQLAFL----HICTHA 327

                 ....*..
gi 46403546  321 LTSSMLF 327
Cdd:MTH00211 328 FFKAMLF 334
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
95-370 1.61e-03

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 40.83  E-value: 1.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546   95 YLSMLISLQMFLImtfSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQISLGSL 174
Cdd:MTH00020 116 YLSLFTFLMVVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  175 NYlvmNMWFqDMSSSWSSNLLWLACIMAF---MVKMPLYGLHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygMLR 245
Cdd:MTH00020 193 DF---SSVF-NMVVSAPSSDITLICLFLFigaVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL------LIR 262
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  246 LTIILNPTTKIMAYPFIMLCLwGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQtpwSFMGATALMIAHGLTSSM 325
Cdd:MTH00020 263 SSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKAL 338
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 46403546  326 LFCLANSnyeRIHS----RTMLLARGLQAFLPLMATWWLLASLTNLALP 370
Cdd:MTH00020 339 LFLSAGS---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP 384
PRK12666 PRK12666
putative monovalent cation/H+ antiporter subunit D; Reviewed
137-330 1.95e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237166 [Multi-domain]  Cd Length: 528  Bit Score: 40.60  E-value: 1.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  137 GNQTERLNAGLYFLFYTLIGSLPLL--VALIYVqiSLGSLNYLVMNMWFQDMSSSWSSNLLWLACIM--AFMVKMPLYGL 212
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLigVGLIYG--VTGTLNMADLAQRIAQLPAADRALLEAGAALLlvVFLIKAAMWPL 229
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46403546  213 HLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMLRL-TIILNPTTKIMAYPFIMLCLWGMIMTSSI----CLRQTDLKSL 285
Cdd:PRK12666 230 NFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRL 306
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 46403546  286 IAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12666 307 AAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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