|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
6.27e-70 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 204.79 E-value: 6.27e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 1 MNLPLALAMNTLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 47589201 81 TNNLKLMLATALALISILAAGLAYEWFQKGLEWEE 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
2.85e-46 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 144.68 E-value: 2.85e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 1 MNLPLA-LAMNTLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAT 79
Cdd:MTH00136 1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 47589201 80 QTNNLKLMLATALALISILAAGLAYEWFQKGLEWEE 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
5.97e-45 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 141.28 E-value: 5.97e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 3 LPLALAMNTLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTN 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 47589201 83 NLKLMLATALALISILAAGLAYEWFQKGLEWEE 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
3.15e-43 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 136.93 E-value: 3.15e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 1 MNLPLALAMNTLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|...
gi 47589201 81 TNNLKLMLATALALISILAAGLAYEWFQKGLEW 113
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
1.93e-35 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 117.39 E-value: 1.93e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 1 MNLPLALAMNTLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 47589201 81 TNNLKLMLATALALISILAAGLAYEWFQKGLEWEE 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
6.00e-34 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 113.45 E-value: 6.00e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 5 LALAMNTLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNL 84
Cdd:MTH00203 6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL 85
|
90 100
....*....|....*....|....*....
gi 47589201 85 KLMLATalALISILAAGLAYEWFQKGLEW 113
Cdd:MTH00203 86 SLLLAF--LFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-112 |
1.11e-30 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 104.43 E-value: 1.11e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 18 VMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM-LATALALIS 96
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78
|
90
....*....|....*.
gi 47589201 97 ILAAGLAYEWFQKGLE 112
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
5-115 |
9.36e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 95.31 E-value: 9.36e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 5 LALAMNTLMVMILVMIAFWLPQLNVY-TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNN 83
Cdd:MTH00148 6 LSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSF 85
|
90 100 110
....*....|....*....|....*....|..
gi 47589201 84 LKLMLATALALISILAAGLAYEWFQKGLEWEE 115
Cdd:MTH00148 86 SVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
9-113 |
1.15e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 94.84 E-value: 1.15e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 9 MNTLMVMILVMIAFWL--PQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLKL 86
Cdd:MTH00161 7 LIILLISIILMILASLlsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMS 86
|
90 100
....*....|....*....|....*..
gi 47589201 87 MLATALALISILAAGLAYEWFQKGLEW 113
Cdd:MTH00161 87 WLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
32-113 |
4.13e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 86.20 E-value: 4.13e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 32 EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLKLMLATALALISILAAGLAYEWFQKGL 111
Cdd:MTH00202 34 EKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSL 113
|
..
gi 47589201 112 EW 113
Cdd:MTH00202 114 DW 115
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
12-113 |
1.45e-22 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 84.79 E-value: 1.45e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 12 LMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM-LAT 90
Cdd:COG0838 17 GLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFgLIE 94
|
90 100
....*....|....*....|...
gi 47589201 91 ALALISILAAGLAYEWFQKGLEW 113
Cdd:COG0838 95 MLVFIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
1.72e-22 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 84.52 E-value: 1.72e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 1 MNLPLALAMNTLMVMILVMIAFWL--PQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*
gi 47589201 79 TQTNNLKLMLATALALISILAAGLAYEWFQKGLEW 113
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
31-114 |
1.02e-21 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 82.84 E-value: 1.02e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 31 TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM-LATALALISILAAGLAYEWFQK 109
Cdd:MTH00055 36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFgFWVMYLFLIILTIGLIYEWVKG 113
|
....*
gi 47589201 110 GLEWE 114
Cdd:MTH00055 114 GLEWE 118
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
32-114 |
6.97e-20 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 77.98 E-value: 6.97e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 32 EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM-LATALALISILAAGLAYEWFQKG 110
Cdd:PRK06602 40 EKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLgFVEAMIFILVLLVGLVYLWRKGA 117
|
....
gi 47589201 111 LEWE 114
Cdd:PRK06602 118 LDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
32-114 |
4.43e-19 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 75.87 E-value: 4.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 32 EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM-LATALALISILAAGLAYEWFQKG 110
Cdd:MTH00018 32 EKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYNQIAPFgFWTMVGFLFILTLGLIYEWIKGG 109
|
....
gi 47589201 111 LEWE 114
Cdd:MTH00018 110 LEWE 113
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
13-114 |
4.70e-18 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 73.43 E-value: 4.70e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 13 MVMILVMIAFWLPQLNVY-----TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM 87
Cdd:MTH00030 18 IILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLF 95
|
90 100
....*....|....*....|....*...
gi 47589201 88 -LATALALISILAAGLAYEWFQKGLEWE 114
Cdd:MTH00030 96 sFWIVYTFLIVLAIGLAYEWIKGGLEWD 123
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
12-113 |
9.25e-12 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 57.30 E-value: 9.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 12 LMVMILVMI-AFWLPQL----NVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKL 86
Cdd:CHL00022 14 LIISSLIPIlAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91
|
90 100
....*....|....*....|....*...
gi 47589201 87 -MLATALALISILAAGLAYEWFQKGLEW 113
Cdd:CHL00022 92 sAFIEALIFVLILIVGLVYAWRKGALEW 119
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
33-114 |
2.48e-10 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 53.52 E-value: 2.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 33 KYNPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWATQTNNLKL--MLATALALISILAAgLAYEWFQ 108
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfgLVEMALFMLTVFVA-YAYVWRR 113
|
....*.
gi 47589201 109 KGLEWE 114
Cdd:PRK07928 114 GGLEWD 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
32-113 |
1.50e-09 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 51.67 E-value: 1.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 32 EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWATQTNNLKLM-LATALALISILAAGLAYEWFQKG 110
Cdd:PRK07756 41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLFaLIEMLIFVVMLLVGLAYAWKKKV 118
|
...
gi 47589201 111 LEW 113
Cdd:PRK07756 119 LQW 121
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
12-113 |
6.34e-08 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 46.81 E-value: 6.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 12 LMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwatQTNNLKLMLATA 91
Cdd:MTH00092 13 LLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----LVSDFSSLISFF 88
|
90 100
....*....|....*....|..
gi 47589201 92 LALISILaAGLAYEWFQKGLEW 113
Cdd:MTH00092 89 MLMIFIF-FGFYMEWWYGKLIW 109
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
11-114 |
1.84e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 43.50 E-value: 1.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589201 11 TLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM-LA 89
Cdd:PRK08489 25 FLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLFgLI 101
|
90 100
....*....|....*....|....*
gi 47589201 90 TALALISILAAGLAYEWFQKGLEWE 114
Cdd:PRK08489 102 EMLLFIVLLTIGFIYAWKKGALEWQ 126
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
34-76 |
2.07e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 37.95 E-value: 2.07e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 47589201 34 YNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|