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Conserved domains on  [gi|62288494|gb|AAX78502|]
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unknown [synthetic construct]

Protein Classification

PHA02927 family protein( domain architecture ID 11476114)

PHA02927 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 27-289 0e+00

secreted complement-binding protein; Provisional


:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 551.57  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494   27 MKVESVTFLTLLGIGCVLSCCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 106
Cdd:PHA02927   1 MKVESVTFLTLLGIGCVLSCCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  107 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHN 186
Cdd:PHA02927  81 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHN 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  187 GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKL 266
Cdd:PHA02927 161 GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKL 240

                        250       260
                 ....*....|....*....|...
gi 62288494  267 SGSSSSTCSPGNTWKPELPKCVR 289
Cdd:PHA02927 241 SGSSSSTCSPGNTWQPELPKCVR 263
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 27-289 0e+00

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 551.57  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494   27 MKVESVTFLTLLGIGCVLSCCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 106
Cdd:PHA02927   1 MKVESVTFLTLLGIGCVLSCCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  107 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHN 186
Cdd:PHA02927  81 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHN 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  187 GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKL 266
Cdd:PHA02927 161 GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKL 240

                        250       260
                 ....*....|....*....|...
gi 62288494  267 SGSSSSTCSPGNTWKPELPKCVR 289
Cdd:PHA02927 241 SGSSSSTCSPGNTWQPELPKCVR 263
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 174-228 1.64e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.24  E-value: 1.64e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 62288494 174 CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSD-PPTCQ 228
Cdd:cd00033   1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCtENGGWSPpPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 174-227 8.46e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 56.38  E-value: 8.46e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 62288494    174 CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSDP-PTC 227
Cdd:smart00032   1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITClENGTWSPPpPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
174-227 2.58e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 46.72  E-value: 2.58e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 62288494   174 CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWSDP-PTC 227
Cdd:pfam00084   1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEdGTWSPPfPEC 56
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 27-289 0e+00

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 551.57  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494   27 MKVESVTFLTLLGIGCVLSCCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 106
Cdd:PHA02927   1 MKVESVTFLTLLGIGCVLSCCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  107 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHN 186
Cdd:PHA02927  81 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHN 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  187 GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKL 266
Cdd:PHA02927 161 GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKL 240

                        250       260
                 ....*....|....*....|...
gi 62288494  267 SGSSSSTCSPGNTWKPELPKCVR 289
Cdd:PHA02927 241 SGSSSSTCSPGNTWQPELPKCVR 263
PHA02639 PHA02639
EEV host range protein; Provisional
 112-289 1.11e-26

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 105.90  E-value: 1.11e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  112 CPSPRDIDNGQLD--IGGVDFGSSITYSCNSGYHLIGESKSYCeLGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYE 189
Cdd:PHA02639  22 CDKPDDISNGFITelMEKYEIGKLIEYTCNTDYALIGDRFRTC-IKDKNNAIWSNKAPFCMLKECNDPPSIINGKIYNKR 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  190 DFYTDGSVVTYSCNS----GYSLIGNSGVLCSGGE-WS-DPPTCQIVKCPHPTISNGYLSS-GFKRSYSYNDNVDFKCKY 262
Cdd:PHA02639 101 EMYKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKsWKpDPPICKMINCRFPALQNGYINGiPSNKKFYYKTRVGFSCKS 180

                        170       180
                 ....*....|....*....|....*..
gi 62288494  263 GYKLSGSSSSTCSPGNTWKPELPKCVR 289
Cdd:PHA02639 181 GFDLVGEKYSTCNINATWFPSIPTCVR 207
PHA02831 PHA02831
EEV host range protein; Provisional
 134-289 1.91e-21

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 91.21  E-value: 1.91e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  134 ITYSCNSGYHLIGESksyCELGStgsmvWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCN----SGYSLI 209
Cdd:PHA02831  46 LEYKCNNNFDKVFVT---CNNGS-----WSTKNMCIGKRNCKDPVTILNGYIKNKKDQYSFGDSVTYACKvnklEKYSIV 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  210 GNSGVLCSGGEW-SDPPTCQIVKCPHPTISNGYLSSgFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELPKCV 288
Cdd:PHA02831 118 GNETVKCINKQWvPKYPVCKLIRCKYPALQNGFLNV-FEKKFYYGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKCV 196


                 .
gi 62288494  289 R 289
Cdd:PHA02831 197 K 197
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 27-289 1.58e-16

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 78.20  E-value: 1.58e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494   27 MKVESVTFLTLLGIGCVLSCCTIPSrpinmkFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGpiyAKCTGTGWTLFNQ 106
Cdd:PHA02954   1 MKTISVVTLLCVLPAVVYSTCTVPT------MNNAKLTSTETSFNDKQKVTFTCDSGYYSLDPN---AVCETDKWKYENP 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  107 CiKRRCpSPRDIDNGQLDIGGVDFGSSITYSCNsgyhliGESKSYCELGSTGSMVWNpEAPICESVKCQsPPSISNGRHN 186
Cdd:PHA02954  72 C-KKMC-TVSDYVSELYDKPLYEVNSTITLICK------DETKYFRCEEKNGNTSWN-DTVTCPNAECQ-PLQLEHGSCQ 141

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  187 GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQiVKCPHPTISNGYLSSGfkrSYSYNDNVDFKCKYGYKL 266
Cdd:PHA02954 142 PVKEKYSFGEHITINCDVGYEVIGASYISCTANSWNVIPSCQ-QKCDIPSLSNGLISGS---TFSIGGVIHLSCKSGFTL 217

                        250       260
                 ....*....|....*....|...
gi 62288494  267 SGSSSSTCSPGNtWKPELPKCVR 289
Cdd:PHA02954 218 TGSPSSTCIDGK-WNPVLPICVR 239
PHA02817 PHA02817
EEV Host range protein; Provisional
 169-289 1.10e-15

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 74.21  E-value: 1.10e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  169 CESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSG-----YSLIGNSGVLCS-GGEWS-DPPTCQIVKCPHPTISNGY 241
Cdd:PHA02817  19 CDLNKCCYPPSIKNGYIYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEkDGKWNkEFPVCKIIRCRFPALQNGF 98

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 62288494  242 LSS-GFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELPKCVR 289
Cdd:PHA02817  99 VNGiPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICSR 147
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 174-228 1.64e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.24  E-value: 1.64e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 62288494 174 CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSD-PPTCQ 228
Cdd:cd00033   1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCtENGGWSPpPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 174-227 8.46e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 56.38  E-value: 8.46e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 62288494    174 CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSDP-PTC 227
Cdd:smart00032   1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITClENGTWSPPpPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 112-170 2.98e-10

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 54.78  E-value: 2.98e-10
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 62288494 112 CPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYHLIGESKSYCelgsTGSMVWNPEAPICE 170
Cdd:cd00033   1 CPPPPVPENGTVTGSKGSYsyGSTVTYSCNEGYTLVGSSTITC----TENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 112-169 3.14e-09

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 52.14  E-value: 3.14e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494    112 CPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYHLIGESKSYCELGSTgsmvWNPEAPIC 169
Cdd:smart00032   1 CPPPPDIENGTVTSSSGTYsyGDTVTYSCDPGYTLIGSSTITCLENGT----WSPPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
 103-216 4.04e-08

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 52.64  E-value: 4.04e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494  103 LFNQCIKRRCPSPRDIDNGQLDIGGVDF--GSSITYSCNSG-----YHLIGESKSYCELGSTgsmvWNPEAPICESVKCQ 175
Cdd:PHA02817  15 VYSLCDLNKCCYPPSIKNGYIYNKKTEYniGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGK----WNKEFPVCKIIRCR 90

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 62288494  176 SpPSISNGRHNGYED---FYTDgSVVTYSCNSGYSLIGNSGVLC 216
Cdd:PHA02817  91 F-PALQNGFVNGIPDskkFYYE-SEVSFSCKPGFVLIGTKYSVC 132
Sushi pfam00084
Sushi repeat (SCR repeat);
174-227 2.58e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 46.72  E-value: 2.58e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 62288494   174 CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWSDP-PTC 227
Cdd:pfam00084   1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEdGTWSPPfPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
112-169 3.68e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 46.34  E-value: 3.68e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494   112 CPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYHLIGESKSYCELGSTgsmvWNPEAPIC 169
Cdd:pfam00084   1 CPPPPDIPNGKVSATKNEYnyGASVSYECDPGYRLVGSPTITCQEDGT----WSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
47-105 1.23e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 42.10  E-value: 1.23e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494    47 CTIPSRPINMKFKNSvetdaNANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTG-WTLFN 105
Cdd:pfam00084   1 CPPPPDIPNGKVSAT-----KNEYNYGASVSYECDPGYRLV--GSPTITCQEDGtWSPPF 53
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 232-287 1.33e-04

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 39.05  E-value: 1.33e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 62288494    232 CPHP-TISNGYLSSGfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELPKC 287
Cdd:smart00032   1 CPPPpDIENGTVTSS-SGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 232-288 1.37e-04

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 38.98  E-value: 1.37e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 62288494 232 CPHP-TISNGYLSSGfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELPKCV 288
Cdd:cd00033   1 CPPPpVPENGTVTGS-KGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
PHA02817 PHA02817
EEV Host range protein; Provisional
 43-169 3.08e-04

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 41.08  E-value: 3.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494   43 VLSCCTIPSRPINMKFKNSVETDANANYNIGDTIEYLC---LPGYRKQKMGPIYAKCTGTG--WTLFNQCIKRRCPSP-- 115
Cdd:PHA02817  15 VYSLCDLNKCCYPPSIKNGYIYNKKTEYNIGSNVTFFCgnnTRGVRYTLVGEKNIICEKDGkwNKEFPVCKIIRCRFPal 94

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 62288494  116 -RDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTgsmvWNPEAPIC 169
Cdd:PHA02817  95 qNGFVNGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSS----WIPKVPIC 145
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 47-102 8.47e-04

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 36.67  E-value: 8.47e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 62288494  47 CTIPSRPINMKFKNSVEtdanaNYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTG-WT 102
Cdd:cd00033   1 CPPPPVPENGTVTGSKG-----SYSYGSTVTYSCNEGYTLV--GSSTITCTENGgWS 50
PHA02831 PHA02831
EEV host range protein; Provisional
 47-169 1.77e-03

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 39.21  E-value: 1.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62288494   47 CTIPSRPINMKFKNSVEtdanaNYNIGDTIEYLCLPGY--RKQKMGPIYAKCTGTGWTLFNQ-CIKRRCPSPRdIDNGQL 123
Cdd:PHA02831  78 CKDPVTILNGYIKNKKD-----QYSFGDSVTYACKVNKleKYSIVGNETVKCINKQWVPKYPvCKLIRCKYPA-LQNGFL 151

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 62288494  124 DIGGVDF--GSSITYSCNSGYHLIGESKSYCELGStgsmVWNPEAPIC 169
Cdd:PHA02831 152 NVFEKKFyyGDIVNFKCKKGFILLGSSVSTCDINS----IWYPGIPKC 195
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 47-102 4.23e-03

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 34.81  E-value: 4.23e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 62288494     47 CTIPSRPINMKFKNSvetdaNANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTG-WT 102
Cdd:smart00032   1 CPPPPDIENGTVTSS-----SGTYSYGDTVTYSCDPGYTLI--GSSTITCLENGtWS 50
Sushi pfam00084
Sushi repeat (SCR repeat);
232-287 9.04e-03

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 34.01  E-value: 9.04e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 62288494   232 CPHPT-ISNGYLSSGfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELPKC 287
Cdd:pfam00084   1 CPPPPdIPNGKVSAT-KNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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