|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
8.99e-71 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 206.71 E-value: 8.99e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 1 MNLPLTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 110432683 81 TNNLKLMLTTALALISILAAGLAYEWLQKGLEWEE 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.86e-48 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 150.45 E-value: 1.86e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 1 MNLPLT-LAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAT 79
Cdd:MTH00136 1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 110432683 80 QTNNLKLMLTTALALISILAAGLAYEWLQKGLEWEE 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
1.05e-45 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 143.21 E-value: 1.05e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 3 LPLTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTN 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 110432683 83 NLKLMLTTALALISILAAGLAYEWLQKGLEWEE 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
1.10e-43 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 138.09 E-value: 1.10e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 1 MNLPLTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|...
gi 110432683 81 TNNLKLMLTTALALISILAAGLAYEWLQKGLEW 113
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
1.04e-36 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 120.47 E-value: 1.04e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 1 MNLPLTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 110432683 81 TNNLKLMLTTALALISILAAGLAYEWLQKGLEWEE 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
3.02e-34 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 114.22 E-value: 3.02e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 5 LTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNL 84
Cdd:MTH00203 6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL 85
|
90 100
....*....|....*....|....*....
gi 110432683 85 KLMLttALALISILAAGLAYEWLQKGLEW 113
Cdd:MTH00203 86 SLLL--AFLFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-112 |
1.44e-31 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 106.74 E-value: 1.44e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 18 VMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM-LTTALALIS 96
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78
|
90
....*....|....*.
gi 110432683 97 ILAAGLAYEWLQKGLE 112
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
5-115 |
4.76e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 96.08 E-value: 4.76e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 5 LTLAINTLMVMILVMIAFWLPQLNVYA-EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNN 83
Cdd:MTH00148 6 LSLLFALILSPVLLLLGLVLSKRSYSDrEKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSF 85
|
90 100 110
....*....|....*....|....*....|..
gi 110432683 84 LKLMLTTALALISILAAGLAYEWLQKGLEWEE 115
Cdd:MTH00148 86 SVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
8.57e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 95.23 E-value: 8.57e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 5 LTLAINTLMVMILVMIAFWL--PQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTN 82
Cdd:MTH00161 3 LIILLIILLISIILMILASLlsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTS 82
|
90 100 110
....*....|....*....|....*....|.
gi 110432683 83 NLKLMLTTALALISILAAGLAYEWLQKGLEW 113
Cdd:MTH00161 83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
1.09e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 87.74 E-value: 1.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 1 MNLPLTLAINTLMVMILVMIAFWLPQLNVYA--EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMLSFRSLMdrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*
gi 110432683 79 TQTNNLKLMLTTALALISILAAGLAYEWLQKGLEW 113
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
5-113 |
4.67e-23 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 85.94 E-value: 4.67e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 5 LTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNL 84
Cdd:COG0838 10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFREL 87
|
90 100 110
....*....|....*....|....*....|
gi 110432683 85 KLM-LTTALALISILAAGLAYEWLQKGLEW 113
Cdd:COG0838 88 GWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
1.87e-22 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 84.52 E-value: 1.87e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 1 MNLPLTLAINTLMVMILVMIAFWLPQLNVYA--EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAARSTAdrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*
gi 110432683 79 TQTNNLKLMLTTALALISILAAGLAYEWLQKGLEW 113
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
32-114 |
5.86e-22 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 83.22 E-value: 5.86e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 32 EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLMLT-TALALISILAAGLAYEWLQKG 110
Cdd:MTH00055 37 EKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFwVMYLFLIILTIGLIYEWVKGG 114
|
....
gi 110432683 111 LEWE 114
Cdd:MTH00055 115 LEWE 118
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
7-114 |
1.25e-20 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 79.91 E-value: 1.25e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 7 LAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKL 86
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92
|
90 100
....*....|....*....|....*....
gi 110432683 87 M-LTTALALISILAAGLAYEWLQKGLEWE 114
Cdd:PRK06602 93 LgFVEAMIFILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
1-114 |
6.21e-20 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 77.79 E-value: 6.21e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 1 MNLPLTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQ 80
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78
|
90 100 110
....*....|....*....|....*....|....*
gi 110432683 81 TNNLKLM-LTTALALISILAAGLAYEWLQKGLEWE 114
Cdd:MTH00018 79 YNQIAPFgFWTMVGFLFILTLGLIYEWIKGGLEWE 113
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
13-114 |
1.91e-18 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 74.58 E-value: 1.91e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 13 MVMILVMIAFWLPQLNVY-----AEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLM 87
Cdd:MTH00030 18 IILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLF 95
|
90 100
....*....|....*....|....*...
gi 110432683 88 -LTTALALISILAAGLAYEWLQKGLEWE 114
Cdd:MTH00030 96 sFWIVYTFLIVLAIGLAYEWIKGGLEWD 123
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
12-113 |
5.96e-12 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 57.69 E-value: 5.96e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 12 LMVMILVMI-AFWLPQL----NVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKL 86
Cdd:CHL00022 14 LIISSLIPIlAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91
|
90 100
....*....|....*....|....*...
gi 110432683 87 -MLTTALALISILAAGLAYEWLQKGLEW 113
Cdd:CHL00022 92 sAFIEALIFVLILIVGLVYAWRKGALEW 119
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
33-114 |
2.67e-10 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 53.52 E-value: 2.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 33 KYNPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWATQTNNLKLMLTTALAL-ISILAAGLAYEWLQK 109
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfMLTVFVAYAYVWRRG 114
|
....*
gi 110432683 110 GLEWE 114
Cdd:PRK07928 115 GLEWD 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
31-113 |
5.89e-10 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 52.44 E-value: 5.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 31 AEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWATQTNNLKLM-LTTALALISILAAGLAYEWLQK 109
Cdd:PRK07756 40 AAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLFaLIEMLIFVVMLLVGLAYAWKKK 117
|
....
gi 110432683 110 GLEW 113
Cdd:PRK07756 118 VLQW 121
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-73 |
4.51e-08 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 47.20 E-value: 4.51e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 110432683 1 MNLPLTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLL 73
Cdd:MTH00092 2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
3-114 |
7.80e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 44.66 E-value: 7.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110432683 3 LPLTLAINTLMVMILVMIAFWLPQLNVYAEKYNPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWATQTN 82
Cdd:PRK08489 17 LVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFK 93
|
90 100 110
....*....|....*....|....*....|...
gi 110432683 83 NLKLM-LTTALALISILAAGLAYEWLQKGLEWE 114
Cdd:PRK08489 94 LLGLFgLIEMLLFIVLLTIGFIYAWKKGALEWQ 126
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
34-76 |
1.27e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 38.34 E-value: 1.27e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 110432683 34 YNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|