|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 775.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYSTNPMVWINVTLHSLTISLTSLSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 81 QYHLSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 161 LVALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 241 YGMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 110433029 401 LITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILMGPTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 637.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYSTNPMVWINVTLHSLTISLTSLSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 81 QYHLSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 161 LVALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 241 YGMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 110433029 401 LITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILMGP 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 583.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYSTNPMVWINVTLHSLTISLTSLSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 81 QYHLSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 161 LVALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 241 YGMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 110433029 401 LITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
1.34e-178 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 507.57 E-value: 1.34e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYSTNPMVWINVTLHSLTISLTSLSFL-NQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLkNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 80 SQYHLSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 160 LLVALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 240 GYGMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 320 GLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 110433029 400 MLITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILMGPT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
1.65e-164 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 471.35 E-value: 1.65e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 3 KIIIPTVMLLPVTWYSTNPMVWINVTLHSLTI-SLTSLSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIaLLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 82 YHLSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 162 VALSSIQNYMGTLNLFMMNYWFQElpnSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 242 GMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 322 TSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 110433029 402 ITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKIL 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
5.21e-152 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 439.80 E-value: 5.21e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYSTNPMVWINVTLHSLTISLTSLSFL-NQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 80 SQYHLSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 160 LLVALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 240 GYGMMRITLILS-PLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 110433029 399 NMLITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
2.18e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 353.69 E-value: 2.18e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYSTNpmvWINVTLHSLTISLTSLSFLNQaDTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSL-SFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 81 QYHLSKepSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00163 77 ESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 161 LVALSSIQNYMGTLNLFMMNYwfqelpNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 241 YGMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 110433029 401 LITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILM 455
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
38-456 |
4.24e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 349.14 E-value: 4.24e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 38 SLSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMASQYhlSKEPSERKKYFLFTLISLQLFLIMTFTATELIM 117
Cdd:MTH00150 2 SLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 118 FYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWssnLMWM 197
Cdd:MTH00150 80 FYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 198 ACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICL 277
Cdd:MTH00150 157 LVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 278 RQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMST 357
Cdd:MTH00150 237 RQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 358 WWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNMLITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLM 437
Cdd:MTH00150 317 WWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
410
....*....|....*....
gi 110433029 438 SMHIFPLLMLTLNPKILMG 456
Cdd:MTH00150 397 LLHWVPLLLLILKSDLLFM 415
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
5.27e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 329.78 E-value: 5.27e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYsTNPMVWINVTLHSLTISLTSLSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLI-KYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 81 Q--YHLSKEPserkKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:MTH00014 80 FkiFQNNKAP----KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 159 PLLVALSSIQNYMGTLNLFMMNYWFqelPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKL 238
Cdd:MTH00014 156 PLLMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 239 GGYGMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIA 318
Cdd:MTH00014 233 GGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGL 398
Cdd:MTH00014 313 HGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAI 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 110433029 399 NMLITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKIL 454
Cdd:MTH00014 393 TSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
22-455 |
3.93e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 327.32 E-value: 3.93e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 22 MVWINVTLHSLTISLTSLSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMASQYHLSKEPSErkKYFLFTLIS 101
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNS--KLFTVSVIM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 102 LQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNY 181
Cdd:MTH00205 97 LLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 182 WFQelpNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAYPF 261
Cdd:MTH00205 177 LNF---SDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 262 LMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:MTH00205 254 FSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRS 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 342 MLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNMLITATYSLHMLAMTQRGKSLY 421
Cdd:MTH00205 334 MLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSS 413
|
410 420 430
....*....|....*....|....*....|....
gi 110433029 422 HMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILM 455
Cdd:MTH00205 414 QISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-458 |
2.98e-78 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 251.54 E-value: 2.98e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASqyhlSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 139 QtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWmACIMAFMIKMPLYGLHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFL-AFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 219 AHVEAPIAGSMILAAILLKLGGYGMMRITLILSPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 298 TVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 378 ELFITMATFSWSNTTIILTGLNMLITATYSLHMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILMGP 457
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDL 474
|
.
gi 110433029 458 T 458
Cdd:COG1008 475 I 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
1.57e-72 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 236.37 E-value: 1.57e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASQYHLSKepseRKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 139 QTeRLNAGLYFLFYTLIGSLPLLVALSSIqnYMGTLNLFMMNYWFQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGL--YFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 219 AHVEAPIAGSMILAAILLKLGGYGMMRITLILSP-LTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 298 TVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 378 ELFITMATFSWSNTTIILTGLNMLITATYSLHMLAMTQRG-KSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILMG 456
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGeLSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLD 468
|
...
gi 110433029 457 PTY 459
Cdd:TIGR01972 469 LTE 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-410 |
4.63e-71 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 233.17 E-value: 4.63e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASqyhlSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLAS----WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 139 QTERLNAGLYFLFYTLIGSLPLLVALSSI----QNYMGTLNLfmmNYWFQELPNSWSSNLMWMACIMAFMIKMPLYGLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDI---ADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 215 WLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 294 MALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 110433029 374 NLIGELFITMATFSWSNTTIILTGLNMLITATYSLHM 410
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
52-410 |
7.18e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 229.55 E-value: 7.18e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 52 FSSTFFS-DPLSSPLLTLTMWLLPLTIMASQ---YHLSKEpserkkyFLFTLISLQLFLIMTFTATELIMFYILFESTLI 127
Cdd:MTH00217 71 FGPVVFAvDGISIFFLILTALLTPICILISWnsiKFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILI 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 128 PTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNlfMMNYWFQELPNSWSsNLMWMACIMAFMIKM 207
Cdd:MTH00217 144 PMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD--YQALCCLKIEKELQ-YFIFLGFFLSLAIKI 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 208 PLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLI 286
Cdd:MTH00217 221 PKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEaSEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRII 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 287 AYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTN 366
Cdd:MTH00217 301 AYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLAN 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 110433029 367 LALPPSINLIGELFITMATFSWSNTTIILTGLNMLITATYSLHM 410
Cdd:MTH00217 381 ASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
56-410 |
8.21e-68 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 224.17 E-value: 8.21e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 56 FFSDPLSSPLLTLTMWLLPLTIMASQyhlsKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITR 135
Cdd:MTH00204 79 FAVDGVSLFFILLTTLLIPICILISW----KSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 136 WGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMnyWFQELPNSwSSNLMWMACIMAFMIKMPLYGLHLW 215
Cdd:MTH00204 155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL--LNIKLPLS-IQKWLLVGFFLSLAVKIPQIPFHIW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAYPF-LMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00204 232 LPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHM 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 295 ALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSIN 374
Cdd:MTH00204 312 GLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCN 391
|
330 340 350
....*....|....*....|....*....|....*.
gi 110433029 375 LIGELFITMATFSWSNTTIILTGLNMLITATYSLHM 410
Cdd:MTH00204 392 FVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
7.16e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 216.03 E-value: 7.16e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 112 ATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 192 SNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAYPFLMMCLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 272 TSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMLLARGLQS 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 110433029 351 LLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-409 |
1.56e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 210.93 E-value: 1.56e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 56 FFSDPLSSPLLTLTMWLLPLTIMASQYHLSKepseRKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 136 WGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGT---LNLFMMNYWFQELPNSWssnlMWMACIMAFMIKMPLYGL 212
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIFPF 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 213 HLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSV 291
Cdd:MTH00226 250 HIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSV 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 292 SHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:MTH00226 330 AHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
330 340 350
....*....|....*....|....*....|....*...
gi 110433029 372 SINLIGELFITMATFSWSNTTIILTGLNMLITATYSLH 409
Cdd:MTH00226 410 SGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
89-447 |
5.58e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 167.01 E-value: 5.58e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 89 SERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSsiq 168
Cdd:MTH00094 58 SEKNFNLLILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--- 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 169 nymgtLNLFMMNYWFQELPNSWSSNLMwmaCIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRitl 248
Cdd:MTH00094 135 -----KNFFFFSLCYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR--- 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 249 ILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFC 328
Cdd:MTH00094 204 ILGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFY 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 329 LANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNMLITATYSL 408
Cdd:MTH00094 284 LIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
330 340 350
....*....|....*....|....*....|....*....
gi 110433029 409 HMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLML 447
Cdd:MTH00094 364 FLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWLSLF 402
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-387 |
2.20e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 158.00 E-value: 2.20e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 52 FSSTFFSDPLSSPLLTLTMWLLPLTIMASQYHLSKEPSERKKYFLFTLisLQLFLIMTFTATELIMFYILFESTLIPTLI 131
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLL--LLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 132 IITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWSSnLMWMACIMAFMIKMPLYG 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 212 LHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSP--LTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 290 SVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLAL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330
....*....|....*...
gi 110433029 370 PPSINLIGELFITMATFS 387
Cdd:COG0651 384 PPLSGFVSKWLLLQAALE 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-455 |
2.82e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 159.04 E-value: 2.82e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASqYHLSKEPserkKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS-WKVTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 139 QtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWSSnLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALEL-LLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 219 AHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILgVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 298 TVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 378 EL--FITMA-----TFSWSNTTIILTGLNMLITATYSLHMLAMTQRGK------SLYHMHNFNPsltRENTLMSMHIFPL 444
Cdd:PRK12561 371 ELtvFLGITssdvySSTFRTITILLAAVGLILTPIYLLSMLRRVFYGPrsellpALAVVEDAKP---RELFIALSLLVPI 447
|
410
....*....|.
gi 110433029 445 LMLTLNPKILM 455
Cdd:PRK12561 448 IGIGFYPKLAT 458
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-454 |
3.49e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 145.62 E-value: 3.49e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 58 SDPLSSPLLTLTMWLLPLTIMASqYHLSKEPserkKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWG 137
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA-WPVTFKP----KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 138 NQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWSsNLMWMACIMAFMIKMPLYGLHLWLP 217
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 218 KAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLgVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 297 VTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLI 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 377 GEL--FITMATFSWSNTT-----IILTGLNMLITATYSLHMLA---MTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLM 446
Cdd:PRK02546 398 AELmvFVGFATSDAYTLPfrvvvVFLAAVGVILTPIYLLSMLReifFGPENKELVSHEKLVDAEPREVFIIACLLVPIIG 477
|
....*...
gi 110433029 447 LTLNPKIL 454
Cdd:PRK02546 478 IGLYPKLV 485
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-411 |
6.30e-36 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 138.68 E-value: 6.30e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASQyhlskEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 139 QtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSwSSNLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 219 AHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAYPFLmmCLWGMIMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWL--ATWAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 296 LVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGL---QSLLPLMSTWWLLASLTNLALPPS 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 110433029 373 INLIGELFITMATFSWSNTTIILTGLNMLITATYSLHML 411
Cdd:PRK06473 389 VGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
107-427 |
7.37e-35 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 135.84 E-value: 7.37e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 107 IMTFTATELIMFYILFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMG---TLNlfmmnywF 183
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSnepTLN-------F 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 184 QELPN-SWSSNL---MWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAY 259
Cdd:CHL00011 198 ETLANqSYPVALeilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFS 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 260 PFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIh 338
Cdd:CHL00011 278 PWLVIVgAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI- 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 339 sRTMLLAR--GLQSLLPLMSTWWLLASLTNLALPPSINLIGEL-----FITMATFSWSNTTII--LTGLNMLITATYSLH 409
Cdd:CHL00011 357 -RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELivffgIITSQKYLLMPKILItfVMAIGMILTPIYLLS 435
|
330
....*....|....*...
gi 110433029 410 MLAMTQRGKSLYHMHNFN 427
Cdd:CHL00011 436 MLRQMFYGYKLFNVPNSY 453
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-418 |
8.41e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 124.44 E-value: 8.41e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASQYHLskepsERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENT-----ERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 139 QtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSwSSNLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 219 AHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAYPFLmmCLWGMIMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGL--AIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 296 LVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSL---LPLMSTWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 110433029 373 INLIGELFITMATFSWSNTTIILTGLNMLITATYSLHMLAMTQRGK 418
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGR 434
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-387 |
8.98e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 112.28 E-value: 8.98e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 55 TFFSDPLSSPLLTLTmwlLPLTIMASQYHL-SKEPSERKKYFLFtLISLQLFLIMTFTATeLIMFYILFESTLIPTLIII 133
Cdd:PRK08375 72 ELRADSLSALFLLVT---SILAIAALLYAIgYGEHRQTRFYALF-LLLLAGLLGALLTAD-LFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 134 TRWGNQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNywfQELPNSWSSNLMWMACIMAFMIKMPLYGLH 213
Cdd:PRK08375 147 AMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA---GALAENPTVVTAFGFVLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 214 LWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKF----MAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYS 289
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 290 SVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLAL 369
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330
....*....|....*...
gi 110433029 370 PPSINLIGELFITMATFS 387
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVE 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-408 |
2.02e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 102.74 E-value: 2.02e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASQYHLSKEPSERKKYFLFTLisLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLG--LEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 139 QTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLN-----LFMMNYWFQELPNS-----WSSNLMWMACIMAFMIKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNmadlsAKIRGLSFPLTGGLagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 209 LYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-------TLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 282 LKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 110433029 362 ASLTNLALPPSINLIGELFITMATFSWSnttIILTGLNMLITATYSL 408
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISL 442
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
4.06e-20 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 85.27 E-value: 4.06e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYSTNPMVWINVTLHSLTISLTSLSFLNQADTNSNNFSSTFFS-DPLSSPLLTLTMWLLPLTIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGiDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 110433029 80 SQYHLSKEPSERKKYFLFTLISLQLFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-398 |
7.48e-20 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 91.92 E-value: 7.48e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLIL--SPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 284 SLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190
....*....|....*....|....*....|....*...
gi 110433029 364 LTNLALPPSINLIGELFITMATFS---WSNTTIILTGL 398
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLL 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
22-381 |
5.00e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 82.66 E-value: 5.00e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 22 MVWINVTLHSLTISLTSLSFLNQADTNS------NNFSSTFFSDPLSSPLLTLTMWLlpltIMASQYHLSKEPSERKKYF 95
Cdd:MTH00062 1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCcilvvnNVFNGLFIFDSLSFYLILLVLFL----GLYSQVMFYNLLSGVSRFF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 96 LFtlISLqLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLN 175
Cdd:MTH00062 77 LF--LSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 176 LFMMNYwfqelpNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTK 255
Cdd:MTH00062 154 FSDWGS------DDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 256 FMAYPFLMMCLWGMIMTSLICLrqtDLKSLIAYSSVSHMaLVTVAILIQTPWSFMGATALM-IAHGLTSSMLFCLANSNY 334
Cdd:MTH00062 228 LGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFY 303
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 110433029 335 ERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFI 381
Cdd:MTH00062 304 EVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFL 350
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
5.99e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 80.16 E-value: 5.99e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 52 FSSTFFSDPLSSPLLTLTMWLLPLTIMASQYHLSKEPSERKKYFLFTLISLQLF-LIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 131 IIITRWGNQTERLNAGLYFLFYTligslpllvALSSIQNYMGTLNLFMMNYWFQELPNSWSS---NLMWMACIMAFMIKM 207
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMT---------QLSTVFLMLGIIVLFIQTGSFELSPLGASAgilSLVFLLLFLGFGIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 208 PLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRItlILSPLTKFMAYPFLMMCLwGMIMTSL---ICLRQTDLKS 284
Cdd:PRK08667 220 GIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLA-GSISALLgviYALKEHDLKG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 285 LIAYSSVSHMALVTVAILIQTPWSFMGATALM-----------IAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLP 353
Cdd:PRK08667 297 LLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMP 376
|
330 340 350
....*....|....*....|....*....|...
gi 110433029 354 LMSTWWLLASLTNLALPPSINLIGELFITMATF 386
Cdd:PRK08667 377 YTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
94-327 |
2.57e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 78.11 E-value: 2.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 94 YFLFTLISLqLFLIMTFTATELIMFYILFESTLIPTLIIITRwGNQTERLNAGLYFLFyTLIGSLPLLVALSSIQNYMGT 173
Cdd:PRK08668 100 FNMFALMSL-AGVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGT 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 174 LNLFMMNywfQELPNSWSSNLMWMAC--IMAFMI-KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGM------M 244
Cdd:PRK08668 177 FDFADIS---QGLINDTSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvlyvL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 245 RITLILSPLTKFMAYP---FLMMCLWGM--IMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAH 319
Cdd:PRK08668 254 PGTKLFSEFGTYRGVPlfnYILAWLGNIsiIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNH 333
|
....*...
gi 110433029 320 GLTSSMLF 327
Cdd:PRK08668 334 ALFKGLFF 341
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
5.81e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.83 E-value: 5.81e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 52 FSSTFFSDPLSSPLLTLTMWLLPLTIMASQYHLSKEpseRKKYFLFTLIslqLFLIM----TFTATELIMFYILFESTLI 127
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLM 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 128 PTLIIITRWGNQTErLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWSS--NLMWMACIMAFMI 205
Cdd:PRK07691 143 ASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGliTVVAILFLFVFAT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-TLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKS 284
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 285 LIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASL 364
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAAL 381
|
330 340 350
....*....|....*....|....*....|....
gi 110433029 365 TNLALPPSINLIGELFITMATFSWSNTTIILTGL 398
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVL 415
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-394 |
6.73e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 73.65 E-value: 6.73e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 104 LFLIMTFTATELIM------FYILFESTLIpTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLF 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 178 MMNYWFQELpNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFM 257
Cdd:PRK08377 192 HIAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 258 AYPFLM--MCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYE 335
Cdd:PRK08377 271 SVLKLViiMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 110433029 336 RIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTII 394
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPV 409
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-379 |
5.24e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.77 E-value: 5.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 108 MTFTATELIMFYILFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELP 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 188 NSWSSNLMWMAcIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPlTKFMAYPFLMMCLW 267
Cdd:PRK12665 205 SGTRTALFAVL-LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 268 GMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFcLANSNYERiHSRTMLLAR- 346
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF-LVVGLIER-QAGSSSLRRl 360
|
250 260 270
....*....|....*....|....*....|....*
gi 110433029 347 -GLQSLLPLMSTWWLLASLtNLA-LPPSINLIGEL 379
Cdd:PRK12665 361 gGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
94-327 |
9.47e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 69.78 E-value: 9.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 94 YFLFTLisLQLFLIMTFTATELIMFYILFE-STLIPTLIIITRwgNQTERLNAGLYFLF-------YTLIGsLPLLVALS 165
Cdd:PRK08676 105 YLGFNL--LLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFiastamiFAFIG-LIFLFSLT 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 166 SIQNYMGTLNLFMMNYWFQELPNSWSSnLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMR 245
Cdd:PRK08676 180 RQALGTGTLNWTELAAHASLLSPSVLG-ASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 246 ITLILSPLTKFMAYPFLMMCLwGMIMTSLIC---LRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLT 322
Cdd:PRK08676 259 LSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
....*
gi 110433029 323 SSMLF 327
Cdd:PRK08676 338 KSGLF 342
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-424 |
1.30e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 69.80 E-value: 1.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 115 LIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLfmmNYWFQELPNSWSSNL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF---SELLAAAPTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 195 MWMACIMAF---MIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRitliLSPLtkFMAYPFLMMCL---- 266
Cdd:COG1009 210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----LSPL--FALSPVWLTVVaiig 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 267 -WGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQtpwSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLA 345
Cdd:COG1009 283 aITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 346 RGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNML---ITATYSLHMLAMT----QRGK 418
Cdd:COG1009 360 GGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPK 439
|
....*.
gi 110433029 419 SLYHMH 424
Cdd:COG1009 440 TPKHPH 445
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
111-401 |
2.93e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 68.46 E-value: 2.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 111 TATELIMFYILFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMnywfQELPNSW 190
Cdd:PRK06525 131 YSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAL----SGLHGSL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 191 SSnLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITLILSPLTKFMAYPFLMMCLWGM 269
Cdd:PRK06525 206 KY-LVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 270 IMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQ---TPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLAR 346
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 110433029 347 GLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNTTIILTGLNML 401
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-392 |
3.62e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 68.30 E-value: 3.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 51 NFSSTFFSDPLSSPLLTLTMWLLPLTIMASQYHLSKEPSERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 131 IIITrWGNQTERLNAGLYFLFYTLIGSLPL-LVALSSIQNYMGTLNlFMMNYWFQELPnSWSSNLMWMACImafmIKMPL 209
Cdd:PRK06589 154 FLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLD-FVSGGLFSKNQ-SIILLLMFIYGI----AKTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 210 YGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITLI---LSPLTKF--MAYPFLMMCLWGMIMTSLICLRQTDLKS 284
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 285 LIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASL 364
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
|
330 340
....*....|....*....|....*...
gi 110433029 365 TNLALPPSINLIGELFITMATFSWSNTT 392
Cdd:PRK06589 387 SLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
79-418 |
1.84e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 66.32 E-value: 1.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 79 ASQYhLSKEPSERKKYFLFtLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:PRK12646 98 ATQY-LSSRKDNLPRFYFY-LTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 159 PLLVALSSIQNYMGTLNLFMMNYWFQELPNS-WSSNLMWMACIMAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILL 236
Cdd:PRK12646 176 ALLVGFIMLYIMTGTNNITEILGQADHIKNHgLFIPMIFMFLLGAFT-KSAQFPFHIWLPRA-MAAPTPVSAYLhSATMV 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 237 KLGGYGMMRITLILSpLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAI-----LIQTPWSFMG 311
Cdd:PRK12646 254 KAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIA 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 312 ATALMIA---------HGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTnLALPPSIN--LIGELF 380
Cdd:PRK12646 333 SIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMF 411
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 110433029 381 IT-------MATFSWSNTTIILT--GLNMLITATYSLHMLAMTQRGK 418
Cdd:PRK12646 412 LDaltqtgqLSQFSLISMIIIVFigVIASIFTFTYALYMVKEVFWGK 458
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
66-430 |
2.61e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 65.83 E-value: 2.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 66 LTLTMWLLPLTIMA-----SQYHLSKEPSERKKYFLFTLISLQLFLIMTftATELIMFYILFESTLIPTLIIITRWGNQT 140
Cdd:PRK12650 80 LSLFFALLALVIGAvvfiySARYLPRKKGNTSFYLLMTAFMAAMLLLVL--ADDVVVLFVAWELVSLASFFLIARSGSGG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 141 ErlNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYwfqelPNSWSSNLMWMACI-----MAFMIKMPLYGLHLW 215
Cdd:PRK12650 158 E--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILH-----SDVWAEKPGLTTVVavliaVAAFTKSAQFPFHFW 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRITLILSPLTKFMAypFLMMClwGM---IMTSLICLRQTDLKSLIAYSSVS 292
Cdd:PRK12650 231 LPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNW--LLIIV--GMitaLMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 293 HMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPS 372
Cdd:PRK12650 307 QLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 110433029 373 INLIGE--LFITMATFSWSNTTIIL----TGLNMLITATYSLHML--AMTQRGKSLYHMHNFNPSL 430
Cdd:PRK12650 387 FGFVSKegMLTAFLEAPGGNAGVVLllvgAALGAVFTFAYSARLVlgAFVDGPRDMSHVKEAPVSL 452
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-404 |
4.52e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 64.94 E-value: 4.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 213 HLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRitliLSPLTKFMAYPFLMMCLWG---MIMTSLICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 289 SSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 110433029 369 LPPSINLIGELFITMATFSWSNTTIILTGL----NMLITA 404
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAavlgNALMVA 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-339 |
4.62e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 64.59 E-value: 4.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 89 SERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLValssiq 168
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLI------ 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 169 nymGTLNLFMMN--YWFQELPNSWSSNLMWMAciMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI 246
Cdd:PRK07234 163 ---GAVLVYQANgtFAFSGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 247 TLILSPLTKFMAYPFLMMCLWGmimtSLICLRQTDLKSLIAYSSVSHMALVTVAILIqtpwsfmgATALMIAHGLTSSML 326
Cdd:PRK07234 238 ALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTL 305
|
250
....*....|...
gi 110433029 327 FCLANSNYERIHS 339
Cdd:PRK07234 306 FLCAGALPSRNFT 318
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-398 |
1.08e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 63.69 E-value: 1.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 155 IGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPnswSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAI 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 235 LLKLGGYGMMRITLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALV-------TVAILIQTP- 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 307 ---WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITM 383
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
250
....*....|....*
gi 110433029 384 ATFSWSNTTIILTGL 398
Cdd:PRK08042 382 SFFKLSNSGAFVARL 396
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-371 |
3.12e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 62.21 E-value: 3.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 145 AGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYwfQELPNSWSSNLMWMAcIMAFMIKMPLYGLHLWLPKAHVEAP 224
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRA--AHLSPFWASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 225 IAGSMILAAILLKLGGYGMMRITL-ILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVA--- 300
Cdd:PRK06521 242 SHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlgl 321
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 110433029 301 --ILIQTPWSFMGATALMIA------HGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK06521 322 amVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
39-323 |
3.35e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 62.06 E-value: 3.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 39 LSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMASQYHLSKEPSERKKYFLFTLISLqLFLIMTFTATELIMF 118
Cdd:COG1007 49 LLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFAT-LGMMLMASANDLLTL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 119 YILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLpLLVALSSIQNYMGTLNLFMMNYWFQELPNSwsSNLMWM 197
Cdd:COG1007 128 FLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNLAGIAAALAAGGAN--SPLLLL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 198 ACIM---AFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILlKLGGYGM-MRI-TLILSPLTKFMAYPFLMMCLWGMIMT 272
Cdd:COG1007 205 GLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLlVEAFPGLAADWQLLLAVLAVLSMTVG 283
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 110433029 273 SLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTS 323
Cdd:COG1007 284 NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-387 |
3.62e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 61.67 E-value: 3.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASQYHLSKEPSERK--KYFLFTLISLQLFLIMTFTaTELIMFYILFESTLIPTLIIITRw 136
Cdd:PRK12662 75 DILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKipSFYSAFLLCLGGLLGILVS-NDVFNIYVFLEISSISSYVLVAM- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 137 GNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWL 216
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 217 PKAHVEAPIAGSMILAAILLKLGGYGMMRITL-ILSPLTKFMAYPF----LMMCLWGMIMTSLICLRQTDLKSLIAYSSV 291
Cdd:PRK12662 233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVFKANFVFTTLPFnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 292 SHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12662 313 SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
330
....*....|....*.
gi 110433029 372 SINLIGELFITMATFS 387
Cdd:PRK12662 393 TSGFVAKWYILDAFIK 408
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-371 |
8.35e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.88 E-value: 8.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 82 YHLSKEPSERKKYFLFTLIsLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:PRK08376 111 ISYMKHDTGLDKYYTLILL-LELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVL 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 162 VALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWMaCIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAIllKLGG- 240
Cdd:PRK08376 190 LGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALAL-FIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVI--KQAGl 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 241 YGMMRITLILSPLTKFMAYPFLMMCLWG---MIMTSLICLRQTDLKSLIAYSSVS---HMAL---VTVAILIQTPWSFMG 311
Cdd:PRK08376 267 YALARVLFSIYGPAINLATVGWVIIILGcltMFVGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGDPAMASYG 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 110433029 312 ATAL------MIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK08376 347 EIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-408 |
2.60e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 59.19 E-value: 2.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 52 FSSTFFSDPLSSpLLTLTMWLLPLTIMAsqYHLSKEPSERKKYFLFTLISLQLF-LIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMA--YGFGDIEHSGRRYGFPPFILLLMAgVIGSFLTGDLFNLYVWFEVMLIASF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 131 IIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSWSSNLMWMACIMAFMIKMPLY 210
Cdd:PRK12663 146 VLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 211 GLHlWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITL--------ILSPLTKFMAypflmmCLwGMIMTSLICLRQTDL 282
Cdd:PRK12663 225 PFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTllfpqereLLHPLLATMA------AI-TMVIGALGALAYKDI 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 283 KSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLA 362
Cdd:PRK12663 297 RRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLIL 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 110433029 363 SLTNLALPPSINLIGELFITMATFS----WSNTTIILTGlnmlITATYSL 408
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQGALDngayILLALMLITS----LITMYSL 422
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
31-408 |
2.47e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 53.05 E-value: 2.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 31 SLTISLTSLSFLNQADTNSNNFSSTFFSDPLSSPLLTLTMWLLPLTIMASQYHLSKEPseRKKYFLFTLISLQLFLIMTF 110
Cdd:MTH00208 78 LLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDP--NKNAFFRLLIIFLLNMLILT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 111 TATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQelPNSW 190
Cdd:MTH00208 156 SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNN--SNSF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 191 SSNLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAILLklggygMMRITLILSPLTKFmaypfLM 263
Cdd:MTH00208 234 LINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWF-----LS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 264 MCLWGMIMTSL----ICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSfmgATALMIAHGLTSSMLFCLANSnyeRIHS 339
Cdd:MTH00208 302 LCLILGSLTALfaasTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNL---ALFHICTHAFFKAMLFLCSGS---IIHS 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 340 -------RTMllaRGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELFITmatfSWSNTT-IILTGLNMLITATY 406
Cdd:MTH00208 376 lnneqdlRKM---GGLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEAGLA----SISNLLsIILALIATLLTAVY 448
|
..
gi 110433029 407 SL 408
Cdd:MTH00208 449 SF 450
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
196-327 |
1.14e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 51.05 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 196 WMACImAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRitliLSPLTKFMAYPFLMMCLWGMIMTSLi 275
Cdd:PRK12668 187 WLILI-GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR----AFPGTELLIYIGAAMAVYGVFFALL- 260
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 110433029 276 clrQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 261 ---ENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
155-371 |
1.15e-06 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 51.06 E-value: 1.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 155 IGSLPLLVALSSIQNYMGTLNLFMMNYWFQELP-NSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMILAA 233
Cdd:PRK07390 182 VGDLLLLMGVVALSPLAGTLNFSDLAAWAATANlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNS 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 234 ILLKLGGYGMMRIT--LILSPLTKFmaypfLMMCLWGM--IMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPwsf 309
Cdd:PRK07390 261 VVVATGAWVLIKLQpvLALSPVALT-----VLIVIGTVtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQP--- 332
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 110433029 310 MGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK07390 333 DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLP 394
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
1.24e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 51.08 E-value: 1.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 111 TATELIMFYILFESTLIPTLIIItrwGNQTERLN---AGLYFLFYTLIGSLPLLVALSSIQNYMGTlnlfmmnYWFQELP 187
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGT-------YRLSELL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 188 -NSWSSNLMWMA--CIMA-FMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITLILSPLTkFMAYPFL 262
Cdd:PRK12644 194 aDPPTGPAVSVAvvLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVP-VWRPTVL 271
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 110433029 263 MMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 272 VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
1.69e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 50.23 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 137 GNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELPNSwSSNLMWMACIM---AFMIKMPLYGLH 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAA-DRALLEAGAALllvVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 214 LWLPKAHVEA--PIAGsmiLAAILLKLGGYGMMRI-TLILSPLTKFMAYPFLMMCLWGMIMTSLI----CLRQTDLKSLI 286
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLA 307
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 110433029 287 AYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-323 |
1.14e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 47.51 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 1 MLKIIIPTVMLLPVTWYSTNPMVWINVTLHSLTISLTSLSFLNQADTNSNNFSSTFFSDPLSSpLLTLTMWL--LPLTIM 78
Cdd:PRK05777 14 ELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFAL-FLKGLILLasLLALLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 79 ASQYHLSKEPSErkkYFLFTLISLQLFLIMTFtATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:PRK05777 93 ARPYLEDRGRGE---FYLLVLFALLGMMVMVS-ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 159 PLLVALSSIQNYMGTLNLFMMnywFQELPNSWSSNLMWMACImAFMI-----KMPLYGLHLWLPKAHVEAPIAGSMILAA 233
Cdd:PRK05777 169 FLLYGMSLLYGATGSLSFAGI---AKALADGSGNSLLLLFGL-VFLLvglafKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 234 ILlKLGGYGM-MRI-TLILSPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMG 311
Cdd:PRK05777 245 AP-KIAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSA 323
|
330
....*....|..
gi 110433029 312 ATALMIAHGLTS 323
Cdd:PRK05777 324 VLFYLLAYLFMT 335
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-371 |
1.47e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.52 E-value: 1.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 93 KYFLFTLISLQLFLIMTFTATELIMFyILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMG 172
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 173 TLNLFMMNYWFQELPNSWSSNLMWMACIMAFM---IKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITL 248
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHP 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 249 ILSPLTKFmaypFLMMCLWGMI---MTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTP----WSFMGATALMIAHGL 321
Cdd:PRK12649 270 IFSGTEAW----FILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 110433029 322 TSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
2.68e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.49 E-value: 2.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 59 DPLSSPLLTLTMWLLPLTIMASQYHLSKEPSERKkyfLFTLISLQLFLIMTF-TATELIMFYILFESTLIPTLIIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPR---FLCYLSLFTFLMMVLvTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 138 NQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQELP---NSWSSNLMWMACIMAFMI--------- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGimdRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 206 --KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITlilsPLTKFMAYPFLMMCLWGMI---MTSLICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 281 DLKSLIAYSSVSHMALVTVAILIQTpwSFMGATALMIAHGLTSSMLFCLANSnyeRIHSRT-----MLLARGLQSLLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGS---VIHSTTvdeqdMRKMGGLIHSIPFT 386
|
330 340 350
....*....|....*....|....*....|....*...
gi 110433029 356 STWWLLASLTNLALPPSINLIGELFITMATFSWSNTTI 393
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-449 |
1.77e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 43.91 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 105 FLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLfmmNYWFQ 184
Cdd:MTH00020 123 LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF---SSVFN 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 185 ELPNSWSSNLMWMaCIMAF---MIKMPLYGLHLWLPKAhVEAPIAGS-MILAAILLKLGGYGMMRitliLSPLTKFMAYP 260
Cdd:MTH00020 200 MVVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIR----SSPLFEQAPLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 261 FLMMCLWGMI---MTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQtpwSFMGATALMIAHGLTSSMLFCLANSnyeRI 337
Cdd:MTH00020 274 LIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKALLFLSAGS---VI 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 338 HS----RTMLLARGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELfitmATFSWSNTTII-LTGLNMLITATYS 407
Cdd:MTH00020 348 HAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPyltgfYSKDLILEL----AFGQYYLIFAYwLGCFSALLTAFYS 423
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 110433029 408 LHMLAMTQRGkslyhmhnfNPSLTRENtLMSMH------IFPLLMLTL 449
Cdd:MTH00020 424 IRLIYLTFLS---------NTNLKKAV-FFHLHegdwnlLLPLGILAL 461
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
77-364 |
7.81e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.70 E-value: 7.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 77 IMASQYHLSKEPSerKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTErlnAGLYFLFYTLIG 156
Cdd:PRK06459 58 ILASLYSIEYDHY--GKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 157 SLPLLVALSSIQNYMGTLNlfmmnywFQELPNSWSSNLMwmacIMAFMIKMPLYGLHL--WLPKAHVEAPIAGSMILAAI 234
Cdd:PRK06459 133 TVLILAGFAWAFIISGTTN-------FSYLPSPVPLILA----SFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSAT 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 235 LLKLGGYGMMRITLILSPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAI--------LIQT 305
Cdd:PRK06459 202 MTLMGVYGILKMTILTQTIpIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITS 281
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 110433029 306 PWSFMGATALM--IAHGLTSSMLFC------------LANSNYERIHSRTMLLARGLQSLLPL---MSTWWLLASL 364
Cdd:PRK06459 282 IEHFSLITVILysFAHSVAKTGLFLssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
80-301 |
2.13e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 40.32 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 80 SQYHLSKEPseRKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00211 99 SLWYMSSEP--NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 160 LLVALssiqnYMGTLNLFMMNYwFQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKL 238
Cdd:MTH00211 177 LLLSM-----VWLLLNLNSWEI-SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSALLhSSTMVVA 249
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 110433029 239 GGYGMMRitliLSPLTKFMAYPFLMMCLWG---MIMTSLICLRQTDLKSLIAYSSVSHMALVTVAI 301
Cdd:MTH00211 250 GVFLLIR----LSPLFQNNQLILGAVLLLGaltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL 311
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
95-455 |
2.19e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 39.95 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 95 FLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALssiqnymgtL 174
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGL---------L 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 175 NLFMMNYWfqeLPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAIlLKLGGYgMMRITLILSPLT 254
Cdd:MTH00200 77 NAWTSGQW---GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTW-QKLAPF-ALLIQLAPALNS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 255 KFMAYPFLMMCLWGmimtSLICLRQTDLKSLIAYSSVSHMALVTVAILIQtpwSFMGATALMIAHGLTSSMLFCLANSNY 334
Cdd:MTH00200 152 NILLLLGLLSVLVG----GWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS---PNLALLYLLLYVIITLTVFLLLNLLNS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 335 ERIHSRTMLLARGlqsllPLMSTWWLLASLTNLALPPSINLIGELFITMA----TFSWSNTTIILTGLNMLITATYSLHM 410
Cdd:MTH00200 225 TKINSLSSSKTKN-----PILSMLLGLTLLSLGGLPPLTGFFPKWLILQElskqGLFIYATILLLGSLLSLFFYLRLSYL 299
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 110433029 411 LAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLMLTLNPKILM 455
Cdd:MTH00200 300 TLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
188-303 |
9.03e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 37.94 E-value: 9.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 188 NSWSSNLMWMACiMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILlKLGGYGMMriTLILSplTKFMAYPFLMMCLW 267
Cdd:MTH00144 80 LSFSWFSMSLLL-LGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLL--SNFLD--LYWLAYLLCVISVL 153
|
90 100 110
....*....|....*....|....*....|....*.
gi 110433029 268 GMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILI 303
Cdd:MTH00144 154 SALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH 189
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-327 |
9.05e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.09 E-value: 9.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 112 ATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMNYWFQEL--PNS 189
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNSGqsFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 190 WSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAaILLKLGgygmmritlILSPLTKF--MAYPFLMMCLW 267
Cdd:MTH00196 92 VSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG---------IFSILVSIglNVNILLIGGLF 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433029 268 GMIMTSLICLRQTDLKSLIAYSSVSHMALVTVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| |
