|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 778.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 81 QYHLSKEPWERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 161 LVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 241 YGMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 321 LTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 110433054 401 LITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLNPSIIMGSTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 643.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 81 QYHLSKEPWERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 161 LVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 241 YGMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 321 LTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 110433054 401 LITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLNPSIIMG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 588.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 81 QYHLSKEPWERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 161 LVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 241 YGMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 321 LTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 110433054 401 LITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLNPSIIMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
5.52e-180 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 511.04 E-value: 5.52e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFL-NQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLkNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 80 SQYHLSKEPWERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 160 LLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 240 GYGMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 320 GLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 110433054 400 MLITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLNPSIIMG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.10e-165 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 473.66 E-value: 2.10e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 3 KIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFLNQTDSNSNNFSPTFFS-DPLSSPLLALTMWLLPLTIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSyDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 82 YHLSKEPWERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 162 VALSFIQNHMGTLNLFMMTYWSQElpnSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 242 GMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 322 TSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 110433054 402 ITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLNPSII 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
4.10e-150 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 435.17 E-value: 4.10e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFL-NQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 80 SQYHLSKEPWERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 160 LLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 240 GYGMMRITMILN-PLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 319 HGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 110433054 399 NMLITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLNPSIIM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-456 |
5.70e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 351.45 E-value: 5.70e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 37 MSLSFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQYhlSKEPWERKKYFLFTLISLQLFLIMTFTATELI 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 117 MFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWssnLMW 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 197 MACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLIC 276
Cdd:MTH00150 156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 277 LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMS 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 357 TWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTL 436
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
410 420
....*....|....*....|
gi 110433054 437 MSMHIFPLLLLTLNPSIIMG 456
Cdd:MTH00150 396 LLLHWVPLLLLILKSDLLFM 415
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
1.06e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 351.76 E-value: 1.06e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNpmvWINITLHSLTISLMSLSFLNQtDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSL-SFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 81 QYHLSKEPWerKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00163 77 ESVYKKNNY--SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 161 LVALSFIQNHMGTLNLFMMTYwsqelpNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 241 YGMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 321 LTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 110433054 401 LITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLNPSIIM 455
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
22-455 |
3.31e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 330.40 E-value: 3.31e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 22 MVWINITLHSLTISLMSLSFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQYHLSKEpwERKKYFLFTLIS 101
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 102 LQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTY 181
Cdd:MTH00205 97 LLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 182 WSQelpNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPF 261
Cdd:MTH00205 177 LNF---SDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 262 LMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRT 341
Cdd:MTH00205 254 FSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRS 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 342 MLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLVMTQRGKSLY 421
Cdd:MTH00205 334 MLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSS 413
|
410 420 430
....*....|....*....|....*....|....
gi 110433054 422 HMHNFNPSLTRENTLMSMHIFPLLLLTLNPSIIM 455
Cdd:MTH00205 414 QISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
9.43e-108 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 326.70 E-value: 9.43e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYsTNPMVWINITLHSLTISLMSLSFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLI-KYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 81 Q--YHLSKEPwerkKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:MTH00014 80 FkiFQNNKAP----KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 159 PLLVALSFIQNHMGTLNLFMMTYWSqelPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKL 238
Cdd:MTH00014 156 PLLMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 239 GGYGMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
Cdd:MTH00014 233 GGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 319 HGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGL 398
Cdd:MTH00014 313 HGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAI 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 110433054 399 NMLITATYSLYMLVMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLNPSII 454
Cdd:MTH00014 393 TSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-456 |
1.84e-77 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 249.61 E-value: 1.84e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 59 DPLSSPLLALTMWLLPLTIMASqyhlSKEPWERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 139 QtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWmACIMAFMIKMPLYGLHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFL-AFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 378 ELFITMATFSWSNMTIILTGLNMLITATYSLYML--VMT-QRGKSLYHMHNFNPsltRENTLMSMHIFPLLLLTLNPSII 454
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYqrVFFgPLKEELAELPDLNP---RELAVLAPLAALILLLGLYPQPL 471
|
..
gi 110433054 455 MG 456
Cdd:COG1008 472 LD 473
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
52-410 |
3.63e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 235.72 E-value: 3.63e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 52 FSPTFFS-DPLSSPLLALTMWLLPLTIMASqyhlskepWERKKY----FLFTLISLQLFLIMTFTATELIMFYILFESTL 126
Cdd:MTH00217 71 FGPVVFAvDGISIFFLILTALLTPICILIS--------WNSIKFlikeFLLCLLVIEILLMGVFTILDLVGFYILFEGIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 127 IPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNlfMMTYWSQELPNSWSsNLMWMACIMAFMIK 206
Cdd:MTH00217 143 IPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD--YQALCCLKIEKELQ-YFIFLGFFLSLAIK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 207 MPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMIMTSLICLRQTDLKSL 285
Cdd:MTH00217 220 IPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEaSEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRI 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 286 IAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLT 365
Cdd:MTH00217 300 IAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLA 379
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 110433054 366 NLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:MTH00217 380 NASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-416 |
6.50e-71 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 232.79 E-value: 6.50e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 59 DPLSSPLLALTMWLLPLTIMASqyhlSKEPWERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLAS----WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 139 QTERLNAGLYFLFYTLIGSLPLLVALSFI----QNHMGTLNLfmmTYWSQELPNSWSSNLMWMACIMAFMIKMPLYGLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDI---ADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 215 WLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 294 MALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 110433054 374 NLIGELFITMATFSWSNMTIILTGLNMLITAtysLYMLVMTQR 416
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAA---VYSLWLYQR 432
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
1.68e-70 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 231.37 E-value: 1.68e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 59 DPLSSPLLALTMWLLPLTIMASQYHLSKepweRKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 139 QTeRLNAGLYFLFYTLIGSLPLLVA---LSFIQNHMGTLNLFMmtywSQELPNSWSSnLMWMACIMAFMIKMPLYGLHLW 215
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAilgLYFLGGGTFDLLELL----NLPLPFGVQT-WLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNP-LTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHM 294
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 295 ALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSIN 374
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 375 LIGELFITMATFSWSNMTIILTGLNMLITAtysLYMLVMTQR----GKSLYHMHNFNPSLTRENTLMSMHIFPLLLLTLN 450
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAA---AYMLTLYKRvffgELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLY 462
|
....*....
gi 110433054 451 PSIIMGSTY 459
Cdd:TIGR01972 463 PNPLLDLTE 471
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
51-410 |
3.00e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 228.02 E-value: 3.00e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 51 NFSPTFFS-DPLSSPLLALTMWLLPLTIMASQ---YHLSKEpwerkkyFLFTLISLQLFLIMTFTATELIMFYILFESTL 126
Cdd:MTH00204 73 QWGPLVFAvDGVSLFFILLTTLLIPICILISWksiKFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGIL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 127 IPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTywSQELPNSwSSNLMWMACIMAFMIK 206
Cdd:MTH00204 146 IPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILL--NIKLPLS-IQKWLLVGFFLSLAVK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 207 MPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPF-LMLCLWGMIMTSLICLRQTDLKSL 285
Cdd:MTH00204 223 IPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 286 IAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLT 365
Cdd:MTH00204 303 IAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLA 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 110433054 366 NLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:MTH00204 383 NMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
7.08e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 210.63 E-value: 7.08e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 112 ATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 192 SNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMLCLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 272 TSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERIHNRTMLLARGLQS 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 110433054 351 LLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-409 |
2.84e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 207.47 E-value: 2.84e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 56 FFSDPLSSPLLALTMWLLPLTIMASqyhlskepWERKKY----FLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLI 131
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILIS--------WHSVKYltksFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYL 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 132 IITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYwSQELPNSWSSNLMWMACIMAFMIKMPLYG 211
Cdd:MTH00226 170 ILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAS-CSHVVSEQTQKWIFLGIFLAMAVKIPIFP 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 212 LHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSS 290
Cdd:MTH00226 249 FHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSS 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 291 VSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALP 370
Cdd:MTH00226 329 VAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*....
gi 110433054 371 PSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLY 409
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
96-447 |
1.09e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 166.24 E-value: 1.09e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 96 LFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSfiqnhmgtLN 175
Cdd:MTH00094 65 LILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KN 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 176 LFMMTYWSQELPNSWSSNLMwmaCIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRitmILNPLTK 255
Cdd:MTH00094 137 FFFFSLCYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNF 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 256 FMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYE 335
Cdd:MTH00094 211 VYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYH 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 336 RIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLVMTQ 415
Cdd:MTH00094 291 ISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSF 370
|
330 340 350
....*....|....*....|....*....|..
gi 110433054 416 RGKSLYHMHNFNPSLTRENTLMSMHIFPLLLL 447
Cdd:MTH00094 371 MGKKFSNFNNFNVGLSLPLVFMMFNMFWLSLF 402
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-387 |
1.65e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 158.39 E-value: 1.65e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 52 FSPTFFSDPLSSPLLALTMWLlplTIMASQYHLSKEPWERKKYFLFTLISLQLF-LIMTFTATELIMFYILFESTLIPTL 130
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALV---ALAVLLYSIGYMRHERRGRRFYPLFLLLLAgMNGAFLTGDLFNLFVFFEVMLLASY 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 131 IIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSnLMWMACIMAFMIKMPLY 210
Cdd:COG0651 145 GLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 211 GLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNP--LTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAY 288
Cdd:COG0651 223 PLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 289 SSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLA 368
Cdd:COG0651 303 SSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAG 382
|
330
....*....|....*....
gi 110433054 369 LPPSINLIGELFITMATFS 387
Cdd:COG0651 383 LPPLSGFVSKWLLLQAALE 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
2.28e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 159.43 E-value: 2.28e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 59 DPLSSPLLALTMWLLPLTIMASqYHLSKEPwerkKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS-WKVTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 139 QtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSnLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALEL-LLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLM-LCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAiLGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 110433054 378 EL--FITMA-----TFSWSNMTIILTGLNMLITATYSLYML 411
Cdd:PRK12561 371 ELtvFLGITssdvySSTFRTITILLAAVGLILTPIYLLSML 411
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
6.32e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 144.85 E-value: 6.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 58 SDPLSSPLLALTMWLLPLTIMASqYHLSKEPwerkKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWG 137
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA-WPVTFKP----KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 138 NQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSsNLMWMACIMAFMIKMPLYGLHLWLP 217
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 218 KAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFL-MLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 297 VIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLI 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 110433054 377 GEL--FITMATFSWSNMT-----IILTGLNMLITATYSLYML 411
Cdd:PRK02546 398 AELmvFVGFATSDAYTLPfrvvvVFLAAVGVILTPIYLLSML 439
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-416 |
5.24e-37 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 141.76 E-value: 5.24e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 59 DPLSSPLLALTMWLLPLTIMASQYHLskepwERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 139 QtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSwSSNLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFL-MLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGL---QSLLPLMSTWWLLASLTNLALPPSIN 374
Cdd:PRK06473 311 LLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 110433054 375 LIGELFITMATFswsNMTIILTGLNMLITATYSLYMLVMTQR 416
Cdd:PRK06473 391 FIAEFLVFRGSF---PIFPVQTLLCMIGTGLTAVYFLLLVNR 429
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
107-411 |
1.25e-34 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 135.07 E-value: 1.25e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 107 IMTFTATELIMFYILFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVA---LSFIQNHMGTLNlfMMTYWS 183
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGvlgMGLYGSNEPTLN--FETLAN 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 184 QELPNSWSSnLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLM 263
Cdd:CHL00011 203 QSYPVALEI-LFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLV 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 264 LC-LWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhnRTM 342
Cdd:CHL00011 282 IVgAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLV 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 110433054 343 LLAR--GLQSLLPLMSTWWLLASLTNLALPPSINLIGEL-----FITMATFSWSNMTII--LTGLNMLITATYSLYML 411
Cdd:CHL00011 360 YLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELivffgIITSQKYLLMPKILItfVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-418 |
1.23e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 123.67 E-value: 1.23e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 59 DPLSSPLLALTMWLLPLTIMASQYHLskepwERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENT-----ERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 139 QtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSwSSNLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPflMLCLWGMIMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 296 LVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSL---LPLMSTWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 110433054 373 INLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLVMTQRGK 418
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGR 434
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-406 |
7.86e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 115.36 E-value: 7.86e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 55 TFFSDPLSSPLLALTmwlLPLTIMASQYHL-SKEPWERKKYFLFtLISLQLFLIMTFTATeLIMFYILFESTLIPTLIII 133
Cdd:PRK08375 72 ELRADSLSALFLLVT---SILAIAALLYAIgYGEHRQTRFYALF-LLLLAGLLGALLTAD-LFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 134 TRWGNQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMtywSQELPNSWSSNLMWMACIMAFMIKMPLYGLH 213
Cdd:PRK08375 147 AMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADL---AGALAENPTVVTAFGFVLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 214 LWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKF----MAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYS 289
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 290 SVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLAL 369
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 110433054 370 PPSINLIGELFITMATFS---WSNMTIILTGlnMLITATY 406
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVEagqWLVLAVLLAS--SLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-449 |
7.64e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 103.90 E-value: 7.64e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 59 DPLSSPLLALTMWLLPLTIMASQYHLSKEpwERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 139 QTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNS----------WSSNLMWMACIMAFMIKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPltgglagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 209 LYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-------TMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 282 LKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 362 ASLTNLALPPSINLIGELFITMATFSWSnmtIILTGLNMLITATYSL-------YMLVMTQRGKSLYHMHnfnpsltREN 434
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLvgyfrawYSLFFGKPKSGEEVEH-------KES 468
|
410
....*....|....*
gi 110433054 435 TLMSMHIFPLLLLTL 449
Cdd:PRK12667 469 PSMSVVILVLALAVL 483
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
8.28e-20 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 84.50 E-value: 8.28e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFLNQ-TDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNpSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 110433054 80 SQYHLSKEPWERKKYFLFTLISLQLFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-398 |
5.69e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 89.22 E-value: 5.69e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMIL--NPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 284 SLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190
....*....|....*....|....*....|....*...
gi 110433054 364 LTNLALPPSINLIGELFITMATFS---WSNMTIILTGL 398
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLL 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
96-395 |
9.26e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 78.81 E-value: 9.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 96 LFTLISLqLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLN 175
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 176 LFMmtyWSQELPNSWSSNLMwmaCIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTK 255
Cdd:MTH00062 154 FSD---WGSDDSVSLIVYYV---LSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 256 FMAYPFLMLCLWGMIMTSLICLrqtDLKSLIAYSSVSHMaLVIVAILIQTPWSFMGATALM-IAHGLTSSMLFCLANSNY 334
Cdd:MTH00062 228 LGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFY 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 110433054 335 ERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIIL 395
Cdd:MTH00062 304 EVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
94-327 |
1.24e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.27 E-value: 1.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 94 YFLFTLISLqLFLIMTFTATELIMFYILFESTLIPTLIIITrWGNQTERLNAGLYFLFyTLIGSLPLLVALSFIQNHMGT 173
Cdd:PRK08668 100 FNMFALMSL-AGVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGT 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 174 LNLFMMtywSQELPNSWSSNLMWMAC--IMAFMI-KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGM------M 244
Cdd:PRK08668 177 FDFADI---SQGLINDTSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvlyvL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 245 RITMILNPLTKFM-----AYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
Cdd:PRK08668 254 PGTKLFSEFGTYRgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNH 333
|
....*...
gi 110433054 320 GLTSSMLF 327
Cdd:PRK08668 334 ALFKGLFF 341
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
3.73e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 77.85 E-value: 3.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 52 FSPTFFSDPLSSPLLALTMWLLPLTIMASQYHLSKEPWERKKYFLFTLISLQLF-LIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 131 IIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPnswssnLMWMACIMAFMIKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 211 GLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRItmILNPLTKFMAYPFLMLCLwGMIMTSL---ICLRQTDLKSLIA 287
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLA-GSISALLgviYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 288 YSSVSHMALVIVAILIQTPWSFMGATALM-----------IAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMS 356
Cdd:PRK08667 300 YSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTS 379
|
330 340 350
....*....|....*....|....*....|
gi 110433054 357 TWWLLASLTNLALPPSINLIGELFITMATF 386
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
1.30e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 75.76 E-value: 1.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 52 FSPTFFSDPLSSPLLALTMWLLPLTIMASQYHLSKEpweRKKYFLFTLIslqLFLIM----TFTATELIMFYILFESTLI 127
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLM 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 128 PTLIIITRWGNQTErLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSS--NLMWMACIMAFMI 205
Cdd:PRK07691 143 ASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGliTVVAILFLFVFAT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-TMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKS 284
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 285 LIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASL 364
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAAL 381
|
330 340 350
....*....|....*....|....*....|....
gi 110433054 365 TNLALPPSINLIGELFITMATFSWSNMTIILTGL 398
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVL 415
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-379 |
5.40e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 73.85 E-value: 5.40e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 108 MTFTATELIMFYILFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELP 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 188 NSWSSNLMWMAcIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAypFLMLC-L 266
Cdd:PRK12665 205 SGTRTALFAVL-LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDT--LLMVVaL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 267 WGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFcLANSNYERiHNRTMLLAR 346
Cdd:PRK12665 282 LTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF-LVVGLIER-QAGSSSLRR 359
|
250 260 270
....*....|....*....|....*....|....*.
gi 110433054 347 --GLQSLLPLMSTWWLLASLtNLA-LPPSINLIGEL 379
Cdd:PRK12665 360 lgGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-387 |
1.21e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 72.88 E-value: 1.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 104 LFLIMTFTATELIM------FYILFESTLIpTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLF 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 178 MMTYWSQELpNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFM 257
Cdd:PRK08377 192 HIAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 258 AYPFLMLCLWGM--IMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYE 335
Cdd:PRK08377 271 SVLKLVIIMATLtvFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 110433054 336 RIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFS 387
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
94-327 |
1.48e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.48 E-value: 1.48e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 94 YFLFTLisLQLFLIMTFTATELIMFYILFE-STLIPTLIIITRwgNQTERLNAGLYFLF-------YTLIGsLPLLVALS 165
Cdd:PRK08676 105 YLGFNL--LLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFiastamiFAFIG-LIFLFSLT 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 166 FIQNHMGTLNLFMMTYWSQELPNSWSSnLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMR 245
Cdd:PRK08676 180 RQALGTGTLNWTELAAHASLLSPSVLG-ASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 246 ITMILNPLTKFMAYPFLMLCLwGMIMTSLIC---LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLT 322
Cdd:PRK08676 259 LSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
....*
gi 110433054 323 SSMLF 327
Cdd:PRK08676 338 KSGLF 342
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-456 |
1.31e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 69.80 E-value: 1.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 115 LIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLfmmTYWSQELPNSWSSNL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF---SELLAAAPTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 195 MWMACIMAF---MIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRitmiLNPLtkFMAYPFLMLCL---- 266
Cdd:COG1009 210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----LSPL--FALSPVWLTVVaiig 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 267 -WGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLA 345
Cdd:COG1009 283 aITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 346 RGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNML---ITATYSLYMLVMT----QRGK 418
Cdd:COG1009 360 GGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPK 439
|
330 340 350
....*....|....*....|....*....|....*...
gi 110433054 419 SLYHMHNFNPSLTrentlmsmhiFPLLLLTLnPSIIMG 456
Cdd:COG1009 440 TPKHPHESPWLMT----------LPLVVLAV-LSLVLG 466
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
111-401 |
2.61e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 68.46 E-value: 2.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 111 TATELIMFYILFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELpnsw 190
Cdd:PRK06525 131 YSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL---- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 191 sSNLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITMILNPLTKFMAYPFLMLCLWGM 269
Cdd:PRK06525 206 -KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 270 IMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQ---TPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLAR 346
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 110433054 347 GLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNML 401
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-392 |
2.80e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 68.30 E-value: 2.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 16 WYSTNPMVWINITLHSL-TISLMSLSFLNQTDS-----NSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQYHLSKEPW 89
Cdd:PRK06589 33 DSFIRNFLLITISIFFFgNILLIDLLFLKGIRAqfelmDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 90 ERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPL-LVALSFIQ 168
Cdd:PRK06589 113 DSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIY 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 169 NHMGTLNLFMMTYWSQElpNSWSSNLMWMACImafmIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITM 248
Cdd:PRK06589 192 TKTGNLDFVSGGLFSKN--QSIILLLMFIYGI----AKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 249 I---LNPLTKF--MAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTS 323
Cdd:PRK06589 266 YifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAK 345
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 110433054 324 SMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMT 392
Cdd:PRK06589 346 ICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-404 |
3.10e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.79 E-value: 3.10e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 115 LIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNS-WSSN 193
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIREHpLYLA 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 194 LMWMACIMAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRitmiLNPLTKFMAYPFLMLCLWG---M 269
Cdd:PRK12647 197 ILLLVLGGAFT-KSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltM 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 270 IMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQ 349
Cdd:PRK12647 271 LTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 110433054 350 SLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGL----NMLITA 404
Cdd:PRK12647 351 RAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAavlgNALMVA 409
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
79-418 |
5.95e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 67.86 E-value: 5.95e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 79 ASQYhLSKEPWERKKYFLFtLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:PRK12646 98 ATQY-LSSRKDNLPRFYFY-LTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 159 PLLVALSFIQNHMGTLNLFMMTYWSQELPNS-WSSNLMWMACIMAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILL 236
Cdd:PRK12646 176 ALLVGFIMLYIMTGTNNITEILGQADHIKNHgLFIPMIFMFLLGAFT-KSAQFPFHIWLPRA-MAAPTPVSAYLhSATMV 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 237 KLGGYGMMRITMILNpLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAI-----LIQTPWSFMG 311
Cdd:PRK12646 254 KAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIA 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 312 ATALMIA---------HGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTnLALPPSIN--LIGELF 380
Cdd:PRK12646 333 SIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMF 411
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 110433054 381 IT-------MATFSWSNMTIILT--GLNMLITATYSLYMLVMTQRGK 418
Cdd:PRK12646 412 LDaltqtgqLSQFSLISMIIIVFigVIASIFTFTYALYMVKEVFWGK 458
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-338 |
7.01e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 67.28 E-value: 7.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 6 IPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFLNQTDsnsnNFSPTFFSDPLSSpLLALTMWLLplTIMASQYhls 85
Cdd:PRK07234 17 FAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLD----NFGVTLRADALSG-YFILTNALV--TLAVIFY--- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 86 kePWERKK--YFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLL-- 161
Cdd:PRK07234 87 --CWESAKtrFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLig 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 162 VALSFIQNHmgtlnlfmmTYWSQELPNSWSSNLMWMAciMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:PRK07234 164 AVLVYQANG---------TFAFSGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 242 GMMRITMILNPLTKFMAYPFLMLCLWGmimtSLICLRQTDLKSLIAYSSVSHMALVIVAILIqtpwsfmgATALMIAHGL 321
Cdd:PRK07234 233 PLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGL 300
|
330
....*....|....*..
gi 110433054 322 TSSMLFCLANSNYERIH 338
Cdd:PRK07234 301 VKSTLFLCAGALPSRNF 317
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-397 |
1.34e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 66.30 E-value: 1.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 119 YILFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWMA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 199 CIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITM-ILNPLTKFMAYPF----LMLCLWGMIMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVFKANFVFTTLPFnnvfMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 274 LICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLP 353
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMP 374
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 110433054 354 LMSTWWLLASLTNLALPPSINLIGELFI---TMATFSWSNMTIILTG 397
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYIldaFIKSNAWIGLVVLLVG 421
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
94-330 |
2.21e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 66.22 E-value: 2.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 94 YFLFTLISLQLFLIMTftATELIMFYILFESTLIPTLIIITRWGNQTErlNAGLYFLFYTLIGSLPLLVALSFIQNHMGT 173
Cdd:PRK12650 113 YLLMTAFMAAMLLLVL--ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 174 LNLFMM---TYWSQelpNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMIL 250
Cdd:PRK12650 189 TSLSGIlhsDVWAE---KPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 251 NPLTKFMaypfLMLCLWGM---IMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12650 266 HDVAVWN----WLLIIVGMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLF 341
|
...
gi 110433054 328 CLA 330
Cdd:PRK12650 342 MLI 344
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-371 |
2.38e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 65.68 E-value: 2.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 145 AGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTywSQELPNSWSSNLMWMAcIMAFMIKMPLYGLHLWLPKAHVEAP 224
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR--AAHLSPFWASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 225 IAGSMILAAILLKLGGYGMMRITM-ILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVA--- 300
Cdd:PRK06521 242 SHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlgl 321
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 110433054 301 --ILIQTPWSFMGATALMIA------HGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK06521 322 amVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-398 |
5.76e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 64.46 E-value: 5.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 155 IGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPnswSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAI 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 235 LLKLGGYGMMRITMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALV-------IVAILIQTP- 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 307 ---WSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITM 383
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
250
....*....|....*
gi 110433054 384 ATFSWSNMTIILTGL 398
Cdd:PRK08042 382 SFFKLSNSGAFVARL 396
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-323 |
1.68e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 62.83 E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 9 IMLLPVTWYSTNPMVWINITLHSLTISLMSLsFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQYHLSKEP 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALALL-LLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 89 WERKKYFLFTLISLqLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLpLLVALSFI 167
Cdd:COG1007 99 LLRGEFYALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 168 QNHMGTLNLFMMTYWSQELPNSwsSNLMWMACIM---AFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILlKLGGYGM- 243
Cdd:COG1007 177 YGATGSLNLAGIAAALAAGGAN--SPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAl 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 244 MRITMI-LNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLT 322
Cdd:COG1007 254 LRLLVEaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFM 333
|
.
gi 110433054 323 S 323
Cdd:COG1007 334 N 334
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-408 |
1.10e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 60.35 E-value: 1.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 52 FSPTFFSDPLSSpLLALTMWLLPLTIMAsqYHLSKEPWERKKYFLFTLISLQLF-LIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMA--YGFGDIEHSGRRYGFPPFILLLMAgVIGSFLTGDLFNLYVWFEVMLIASF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 131 IIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWMACIMAFMIKMPLY 210
Cdd:PRK12663 146 VLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 211 GLHlWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFL--MLCLwGMIMTSLICLRQTDLKSLIAY 288
Cdd:PRK12663 225 PFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 289 SSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLA 368
Cdd:PRK12663 303 QVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 110433054 369 LPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSL 408
Cdd:PRK12663 383 LPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
63-371 |
1.52e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.11 E-value: 1.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 63 SPLLALTMWLLPLTIMASQYHLSKEPWERKKYFLFTLIsLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTER 142
Cdd:PRK08376 92 GAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILL-LELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 143 LNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLMWMaCIMAFMIKMPLYGLHLWLPKAHVE 222
Cdd:PRK08376 171 IEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALAL-FIAGLAMKSGAVPVHMWLPDAYPA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 223 APIAGSMILAAIllKLGG-YGMMRITMILNPLT---KFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVS---HMA 295
Cdd:PRK08376 250 APSSISAMLLVI--KQAGlYALARVLFSIYGPAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSqigYML 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 296 L---VIVAILIQTPWSFMGATAL------MIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTN 366
Cdd:PRK08376 328 LglgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAI 407
|
....*
gi 110433054 367 LALPP 371
Cdd:PRK08376 408 VGLPP 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
5.71e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 55.32 E-value: 5.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 111 TATELIMFYILFESTLIPTLIIItrwGNQTERLN---AGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLfmmtywSQELP 187
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRL------SELLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 188 NSWSSNLMWMA--CIMA-FMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITMILNPLTkFMAYPFLM 263
Cdd:PRK12644 195 DPPTGPAVSVAvvLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVP-VWRPTVLV 272
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 110433054 264 LCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 273 LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-327 |
3.43e-07 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 52.59 E-value: 3.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 136 WGNQTER-LNAGL-YFLFYTLIGSLpLLVALSFIQNHMGTLnLFMMTYWSQELPNswssnlmWMACImAFMIKMPLYGLH 213
Cdd:PRK12668 134 WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSF-AFGAIAGLGGTAA-------WLILI-GFGVNAAFPPLH 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 214 LWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI---TMILNPLTKFMAypflmlcLWGMIMTSLiclrQTDLKSLIAYSS 290
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELLIYIGAAMA-------VYGVFFALL----ENDLRRLLSYHI 272
|
170 180 190
....*....|....*....|....*....|....*..
gi 110433054 291 VSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 273 VSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
39-408 |
3.72e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 52.67 E-value: 3.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 39 LSFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQYHLSKEPweRKKYFLFTLISLQLFLIMTFTATELIMF 118
Cdd:MTH00208 86 ISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDP--NKNAFFRLLIIFLLNMLILTSSNNLFLL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 119 YILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQelPNSWSSNLMWMA 198
Cdd:MTH00208 164 FIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNN--SNSFLINILLFG 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 199 CIMAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAILLklggygMMRITMILNPLTKFmaypfLMLCLWGMIM 271
Cdd:MTH00208 242 ILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWF-----LSLCLILGSL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 272 TSL----ICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSfmgATALMIAHGLTSSMLFCLANSnyeRIHN-------R 340
Cdd:MTH00208 310 TALfaasTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNL---ALFHICTHAFFKAMLFLCSGS---IIHSlnneqdlR 383
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 110433054 341 TMllaRGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELFITmatfSWSN-MTIILTGLNMLITATYSL 408
Cdd:MTH00208 384 KM---GGLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEAGLA----SISNlLSIILALIATLLTAVYSF 450
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
1.37e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 50.62 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 137 GNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNlfmMTYWSQELPNSWSSN--LMWMACIM---AFMIKMPLYG 211
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLN---MADLAQRIAQLPAADraLLEAGAALllvVFLIKAAMWP 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 212 LHLWLPKAHVEA--PIAGsmiLAAILLKLGGYGMMRI-TMILNPLTKFMAYPFLMLCLWGMIMTSLI----CLRQTDLKS 284
Cdd:PRK12666 229 LNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRR 305
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 110433054 285 LIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12666 306 LAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-371 |
5.82e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 48.67 E-value: 5.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 93 KYFLFTLISLQLFLIMTFTATELIMFyILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMG 172
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 173 TLNLFMMTYWSQELPNSWSSNLMWMACIMAFM---IKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITM 248
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHP 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 249 ILNPLTKFmaypFLMLCLWGMI---MTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTP----WSFMGATALMIAHGL 321
Cdd:PRK12649 270 IFSGTEAW----FILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 110433054 322 TSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-323 |
7.61e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 48.28 E-value: 7.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:PRK05777 14 ELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 81 QYHLSKEpwERKKYFLFTLISLQLFLIMTFtATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:PRK05777 94 RPYLEDR--GRGEFYLLVLFALLGMMVMVS-ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 161 LVALSFIQNHMGTLNLFMMTYWSQElpNSWSSNLMWMACIM---AFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILlK 237
Cdd:PRK05777 171 LYGMSLLYGATGSLSFAGIAKALAD--GSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-K 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 238 LGGYGM-MRI-TMILNPLTKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATAL 315
Cdd:PRK05777 248 IAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFY 327
|
....*...
gi 110433054 316 MIAHGLTS 323
Cdd:PRK05777 328 LLAYLFMT 335
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
9.57e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.03 E-value: 9.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 59 DPLSSPLLALTMWLLPLTIMASQYHLSKEPweRKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDP--HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 139 QTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMM---TYWSQELPNSWSSNLMWMACIMAFMI---------- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGAYESPLAPFAIigillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 206 -KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITmilnPLTKFMAYPFLMLCLWGMI---MTSLICLRQTD 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 282 LKSLIAYSSVSHMALVIVAILIQTpwSFMGATALMIAHGLTSSMLFCLANS--NYERIHNRTMLLARGLQSLLPLMSTWW 359
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGSviHSTTVDEQDMRKMGGLIHSIPFTYTMM 390
|
330 340 350
....*....|....*....|....*....|....
gi 110433054 360 LLASLTNLALPPSINLIGELFITMATFSWSNMTI 393
Cdd:MTH00032 391 LIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
155-371 |
3.58e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 46.06 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 155 IGSLPLLVALSFIQNHMGTLNLFMMTYWSQELP-NSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMILAA 233
Cdd:PRK07390 182 VGDLLLLMGVVALSPLAGTLNFSDLAAWAATANlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNS 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 234 ILLKLGGYGMMRITMI--LNPLTKFmaypfLMLCLWGM--IMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPwsf 309
Cdd:PRK07390 261 VVVATGAWVLIKLQPVlaLSPVALT-----VLIVIGTVtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQP--- 332
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 110433054 310 MGATALMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK07390 333 DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLP 394
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-327 |
4.78e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.32 E-value: 4.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 112 ATELIMFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLPLL-VALSFIQNHMGTLNLFMMTYWSQELPNS 189
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVLNSGQSFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 190 WSSNLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAaILLKLGgygMMRITMILNPLTKFmaypFLMLCLWGM 269
Cdd:MTH00196 92 VSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG---IFSILVSIGLNVNI----LLIGGLFSL 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 110433054 270 IMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:MTH00196 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
80-301 |
7.73e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.86 E-value: 7.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 80 SQYHLSKEPweRKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00211 99 SLWYMSSEP--NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 160 LLVALSFIQNHMGTLNLfmmtywSQELPNSWSSNLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKL 238
Cdd:MTH00211 177 LLLSMVWLLLNLNSWEI------SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSALLhSSTMVVA 249
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 110433054 239 GGYGMMRitmiLNPLTKFMAYPFLMLCLWG---MIMTSLICLRQTDLKSLIAYSSVSHMALVIVAI 301
Cdd:MTH00211 250 GVFLLIR----LSPLFQNNQLILGAVLLLGaltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL 311
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-456 |
8.71e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.60 E-value: 8.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 105 FLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLN---LFMMty 181
Cdd:MTH00020 123 LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDfssVFNM-- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 182 wsqeLPNSWSSNLMWMaCIMAF---MIKMPLYGLHLWLPKAhVEAPIAGS-MILAAILLKLGGYGMMR------------ 245
Cdd:MTH00020 201 ----VVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRssplfeqaplal 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 246 -ITMILNPLTKFMAypflmlclwgmimtSLICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSS 324
Cdd:MTH00020 275 iIVTIVGSLTVFFA--------------ATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 325 MLFCLANSNYERIHN-RTMLLARGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELFITMATFSWSnmtIILTGL 398
Cdd:MTH00020 338 LLFLSAGSVIHALSDeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPyltgfYSKDLILELAFGQYYLIFA---YWLGCF 414
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 110433054 399 NMLITATYSLYMLVMTQRGkslyhmhnfNPSLTRENtLMSMH------IFPLLLLTLNpSIIMG 456
Cdd:MTH00020 415 SALLTAFYSIRLIYLTFLS---------NTNLKKAV-FFHLHegdwnlLLPLGILALG-SIFVG 467
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
65-364 |
1.42e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 65 LLALTMWLLpltimASQYHLSKEpwERKKYFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTErln 144
Cdd:PRK06459 51 IISTIVWIL-----ASLYSIEYD--HYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR--- 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 145 AGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLfmmtywsqelpNSWSSNLMWMACIMAFMIKMPLYGLHL--WLPKAHVE 222
Cdd:PRK06459 121 PAFVFMAFGELSTVLILAGFAWAFIISGTTNF-----------SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGN 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 223 APIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIVAI 301
Cdd:PRK06459 190 APSNFSAILSATMTLMGVYGILKMTILTQTIpIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVAL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 302 --------LIQTPWSFMGATALM--IAHGLTSSMLFC------------LANSNYERIHNRTMLLARGLQSLLPL---MS 356
Cdd:PRK06459 270 glymvtkqLITSIEHFSLITVILysFAHSVAKTGLFLssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVA 349
|
....*...
gi 110433054 357 TWWLLASL 364
Cdd:PRK06459 350 SWLLLESL 357
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-456 |
2.69e-03 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 40.15 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLMSLSFL--NQTDSNSNNFSPTF---FSDPLSSPLLALTMWLLPL 75
Cdd:MTH00004 13 LLILLTPILLPLLSKNLKNSPTTIKTTVKLAFLISLIPLTLFlnSGTESITTNWPWIFtttFNIPISFKLDQYSLMFLPI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 76 ------TIMA-SQYHLSKEPwERKKYFLFTLISLQLFLIMTfTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLY 148
Cdd:MTH00004 93 alfvtwSILEfSTWYMASDP-HITKFFKYLLIFLIAMLILI-TANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQ 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 149 FLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQelpnswSSNLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGS 228
Cdd:MTH00004 171 AIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQ------TPTLPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVS 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 229 -------MILAAILLklggygMMRITMILNPlTKFMaypfLMLCLWGMIMTSL---IC-LRQTDLKSLIAYSSVSHMALV 297
Cdd:MTH00004 244 allhsstMVVAGIFL------LIRTHPLLQN-NQTA----LTICLCLGALTTLfaaTCaLTQNDIKKIIAFSTSSQLGLM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 298 IVAI-LIQTPWSFMGatalMIAHGLTSSMLFCLANSnyeRIHN-------RTMllaRGLQSLLPLMSTWWLLASLTNLAL 369
Cdd:MTH00004 313 MVTIgLNQPQLAFLH----ISTHAFFKAMLFLCSGS---IIHNlnneqdiRKM---GGLQKTLPITSSCLTIGNLALMGT 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110433054 370 P-----PSINLIGELFITMATFSWS-NMTIILTGLnmliTATYSLYMLVMTQ----RGKSLYHMHNFNPSLTRentlmsm 439
Cdd:MTH00004 383 PflsgfYSKDTIIETLNTSYLNAWAlLLTLLATSF----TAAYSLRMILLVQtgfpRTPPTTPINENTPTIIN------- 451
|
490
....*....|....*..
gi 110433054 440 hifPLLLLTLNpSIIMG 456
Cdd:MTH00004 452 ---PITRLALG-SILAG 464
|
|
| |
