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Conserved domains on  [gi|169648941|gb|ACA62534|]
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NADH dehydrogenase subunit 5 (mitochondrion) [Drosophila melanoloma]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND5 super family cl33362
NADH dehydrogenase subunit 5; Provisional
 2-216 3.24e-64

NADH dehydrogenase subunit 5; Provisional


The actual alignment was detected with superfamily member MTH00165:

Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 208.46  E-value: 3.24e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00165 359 YSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLS 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPYMICLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKSLLMYHISTFLGSMWFMPFMSTYGIIFYPLNLGQIV 161
Cdd:MTH00165 439 WLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLS 518

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 169648941 162 MKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILVNFLL 216
Cdd:MTH00165 519 LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 2-216 3.24e-64

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 208.46  E-value: 3.24e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00165 359 YSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLS 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPYMICLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKSLLMYHISTFLGSMWFMPFMSTYGIIFYPLNLGQIV 161
Cdd:MTH00165 439 WLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLS 518

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 169648941 162 MKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILVNFLL 216
Cdd:MTH00165 519 LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 34-212 6.72e-50

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 160.41  E-value: 6.72e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   34 YSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLNWLIFPIPYMICLPLYMKLLTLFVCIFGGLFGY 113
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  114 LVSFMKLYTLNKSlLMYHISTFLGSMWFMPFMSTYGIIFYPLNLGQIVMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMH 193
Cdd:pfam06455  81 ELSNLSNKQLKKS-LNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159

                         170
                  ....*....|....*....
gi 169648941  194 NNNLKIYLLLFVFWILILV 212
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLL 178
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 2-115 5.08e-03

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 37.44  E-value: 5.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLIS-NVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSML 80
Cdd:COG1009  390 FSKEAILEAALEAgGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLL 469

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 169648941  81 NWL---------IFPIPYMICLPLYMKLLTLFVCIFGGLFGYLV 115
Cdd:COG1009  470 PGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 2-216 3.24e-64

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 208.46  E-value: 3.24e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00165 359 YSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLS 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPYMICLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKSLLMYHISTFLGSMWFMPFMSTYGIIFYPLNLGQIV 161
Cdd:MTH00165 439 WLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLS 518

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 169648941 162 MKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILVNFLL 216
Cdd:MTH00165 519 LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 34-212 6.72e-50

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 160.41  E-value: 6.72e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   34 YSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLNWLIFPIPYMICLPLYMKLLTLFVCIFGGLFGY 113
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  114 LVSFMKLYTLNKSlLMYHISTFLGSMWFMPFMSTYGIIFYPLNLGQIVMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMH 193
Cdd:pfam06455  81 ELSNLSNKQLKKS-LNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159

                         170
                  ....*....|....*....
gi 169648941  194 NNNLKIYLLLFVFWILILV 212
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLL 178
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
 2-215 2.48e-29

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 114.17  E-value: 2.48e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00151 356 YSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQ 435

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPYMICLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKSLLMYhistFLGSMWFMPFMSTYGIIFYPLNLGQIV 161
Cdd:MTH00151 436 SLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLSF----FFSSMWFLSPLSSQPLKSLSLKLSNSS 511

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 169648941 162 MKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILVNFL 215
Cdd:MTH00151 512 MKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
 2-215 1.49e-28

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 112.05  E-value: 1.49e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00209 355 YSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMS 434

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPYMICLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKsllmYHISTFLGSMWFMPFMSTYGIIFYPLNLGQIV 161
Cdd:MTH00209 435 WVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKG----YKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTM 510

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 169648941 162 MKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILVNFL 215
Cdd:MTH00209 511 LKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
 2-212 5.87e-27

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 107.54  E-value: 5.87e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00207 359 YSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALN 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPYMICLPLYMKLLTLFVCIFGGLFGYLvsFMKLYTLNKSLLMYH--ISTFLGSMWFMPFMSTYGIIFYPLNLGQ 159
Cdd:MTH00207 439 WWLPTPQEEPILPLQYKLLPLLVVTLGALLAWL--FTTPNITKTPLLINNplSHFASCLMWFLVPLSSQFIMSTPMNLSH 516

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 169648941 160 IVMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILV 212
Cdd:MTH00207 517 NYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIII 569
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
 2-218 1.12e-21

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 92.34  E-value: 1.12e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00208 416 YSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFS 495

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPyMICLPLYMKLLTLFVCIFGGLFgylvSFMKLYTLNKSLLMYHISTFLGSMWFMPFMSTYGIIFYPLNLG-QI 160
Cdd:MTH00208 496 NFVFNLP-PLTLPLILKSLPLIVTIIGAAF----SFSFLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSlFG 570

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 169648941 161 VMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILVNFLLFL 218
Cdd:MTH00208 571 STRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLII 628
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
 2-218 1.08e-18

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 83.85  E-value: 1.08e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00211 384 FSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIIT 463

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPYMI-CLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKSLLMyhistFLGSMWFMPFMSTYGIIFYPLNLGQ- 159
Cdd:MTH00211 464 SNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTSTLS-----FSNMLGYYPPIIHRLLPKLSLKWGQt 538

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 169648941 160 IVMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILVNFLLFL 218
Cdd:MTH00211 539 LSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLLF 597
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
 2-215 5.86e-13

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 67.24  E-value: 5.86e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00066 387 FSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLII 466

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPIPYMI-CLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKSllmyHISTFLGSMWFMPFMSTYGIIFYPLNLGQ- 159
Cdd:MTH00066 467 FNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKT----KMHSFSNLLAFFPTIIHRLSPKTNLNSGQn 542

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 169648941 160 IVMKSFDQGWSEYFGGQHLY-------KKLTNYSQTLflmhnnnLKIYLLLFVFWILILVNFL 215
Cdd:MTH00066 543 IATHLTDMTWYEKSGPKGLTnqqlppiKTITNIQTGL-------IKTYLTLFLITLLLMLILL 598
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
 2-211 5.63e-12

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 64.03  E-value: 5.63e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00004 389 YSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLIS 468

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  82 WLIFPI-PYMICLPLYMKLLTLFVCIFGGLFGYLVSFMK-LYTLNKSLLMYHISTFLGSMWFMPFMSTYGIIfypLNLGQ 159
Cdd:MTH00004 469 STILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTtTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTL---LKSSQ 545

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 169648941 160 -IVMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILIL 211
Cdd:MTH00004 546 kIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLL 598
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
 2-212 1.39e-08

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 54.31  E-value: 1.39e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCS--SLNMLNDEGWIMLRGMMGLLIMSIIGGSM 79
Cdd:MTH00020 390 YSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKkaVFFHLHEGDWNLLLPLGILALGSIFVGYL 469

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  80 LNWLI--FPIPYMICLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKSLLMYH--ISTFLGSMWFMPFMSTYGIIFYPL 155
Cdd:MTH00020 470 AKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIGrnSYTFLGSAWQFNYILNYFLIKKIW 549

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 169648941 156 NLG-QIVMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILV 212
Cdd:MTH00020 550 KGGhLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFI 607
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
 2-137 6.68e-08

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 52.16  E-value: 6.68e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLN 81
Cdd:MTH00108 390 YSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLIS 469

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 169648941  82 WLIFP--IPYMIcLPLYMKLLTLFVCIFGGLFGYLVSFMKLY-TLNKSLLMYHISTFLG 137
Cdd:MTH00108 470 NNIPPttIPQMT-MPLYLKLTALAVTILGFILALELNLLTNNlKFKYPSNTFKFSNMLG 527
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
 2-217 3.80e-07

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 50.01  E-value: 3.80e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLN--DEGWIMLRGMMGLLIMSIIGGSM 79
Cdd:MTH00210 391 YSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGYL 470

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  80 LNWLIFPIPYMICLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNK-----SLLMYH-ISTFLGSMWFMPFMSTYGIIFY 153
Cdd:MTH00210 471 GKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKIsrrgvSIRLYHvIYTFLNSAWQFNYVINHFIVKN 550

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169648941 154 PLNLGQ-IVMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIY-LLLFVFWILILVNFLLF 217
Cdd:MTH00210 551 IWKFGHlITYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYaLIMIIFTTLFISGAGIE 616
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
 2-217 7.53e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 39.82  E-value: 7.53e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLISNVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSML- 80
Cdd:MTH00137 395 FSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLIt 474

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  81 -NWLIFPIPYMiCLPLYMKLLTLFVCIFGglfgyLVSFMKLYTL-NK------SLLMYHISTFLGsmwFMPFMSTYGIIF 152
Cdd:MTH00137 475 sNILPLKTPVM-TMPPLLKLAALIVTILG-----LLIALELASLtNKqfkptpTLPPHHFSNMLG---FFPAIIHRLTPK 545

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169648941 153 YPLNLGQ-IVMKSFDQGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILVNFLLF 217
Cdd:MTH00137 546 LNLTLGQtIATQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTLFLLTLALATLLLLL 611
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
 19-212 1.34e-03

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 39.17  E-value: 1.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  19 FSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSMLNWLIFPI----------- 87
Cdd:MTH00032 460 FAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdiehpivp 539

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941  88 PYMICLPLYMKLLTLFVCIFGGLFGYLVSFMKLYTLNKSLLMYHISTFLGSMWFMPFMSTYGIIFYPLNLGQI-VMKSFD 166
Cdd:MTH00032 540 PLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWgIYKTLD 619

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 169648941 167 QGWSEYFGGQHLYKKLTNYSQTLFLMHNNNLKIYLLLFVFWILILV 212
Cdd:MTH00032 620 RGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLSFTIIFL 665
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 2-115 5.08e-03

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 37.44  E-value: 5.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169648941   2 YSKDMILEIVLIS-NVNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMMGLLIMSIIGGSML 80
Cdd:COG1009  390 FSKEAILEAALEAgGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLL 469

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 169648941  81 NWL---------IFPIPYMICLPLYMKLLTLFVCIFGGLFGYLV 115
Cdd:COG1009  470 PGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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