|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.32e-152 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 431.94 E-value: 2.32e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 1 MSPFAKLISITSLTLGTTITITSNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 81 TGQWDITQLTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPTLLTTMSMM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 241 NTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 169787753 321 INTLTSPLTSLSILLLPLSPMILLTT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
2.69e-128 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 370.67 E-value: 2.69e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 1 MSPFAKLISITSLTLGTTITITSNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 81 TGQWDITQLTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTtILLLTSHSLNPTLLTTMSMM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 241 NTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 169787753 321 INTL 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
6.55e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 367.32 E-value: 6.55e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 1 MSPFAKLISITSLTLGTTITITSNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 81 TGQWDITQLTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPTLLTTMSMM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 241 NTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*
gi 169787753 321 INTLT 325
Cdd:MTH00070 321 TNNLL 325
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
2.14e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 327.96 E-value: 2.14e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 1 MSPFAKLISITSLTLGTTITITSNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 81 TGQWDITQLTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPTLLTTMSMM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 241 NTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYCSTITLPPNPSN-KMK-QWSTK 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKwQFENT 320
|
....*.
gi 169787753 319 KPINTL 324
Cdd:MTH00105 321 KPMTLL 326
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
1.75e-94 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 284.94 E-value: 1.75e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 1 MSPFAKLISITSLTLGTTITITSNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 81 TGQWDITQLTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPTLLTTMSMM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 241 NTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....
gi 169787753 321 INTL 324
Cdd:MTH00200 321 SNLL 324
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
7-325 |
3.37e-87 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 266.41 E-value: 3.37e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 7 LISITSLTLGTTITITSNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDI 86
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 87 TQLTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPTLLTTMSMMSIALGG 166
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 167 WMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTLNTTLMI 246
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 169787753 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKKPINTLT 325
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYG 325
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
8.67e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 195.43 E-value: 8.67e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 1 MSPFAKLISITSLTLGTTITITSNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 81 TGqwditqLTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPttiLLLTSHSLNPTLLTTMSMM 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 241 NTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYcSTITLPPNPSNKMKQWSTKKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....
gi 169787753 321 INTLTSPLTSLSILLLPLSPMILL 344
Cdd:MTH00160 312 SLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
23-302 |
1.32e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 171.22 E-value: 1.32e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITqltyppscLLLTTAI 102
Cdd:MTH00144 23 SSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM--------SLLLLGL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 103 AIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPttILLLTSHSLNPTLLTT---MSMMSIALGGWMGLNQTQTRKIL 179
Cdd:MTH00144 95 CLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSALVGSIGGLNQTQVRALL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 180 AFSSISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTlMTSWTKTPTLNTTLMITLLSLAGLPPLTG 259
Cdd:MTH00144 173 AYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSLGGLPPFLG 251
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 169787753 260 FLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00144 252 FCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
23-310 |
9.31e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 158.79 E-value: 9.31e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSmtnawfTGQWDITQLTYPPSCLLLTTAI 102
Cdd:MTH00011 25 SNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLKNITALMLLVSL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 103 AIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPTLLTTMSMMSIALGGWMGLNQTQTRKILAFS 182
Cdd:MTH00011 99 MLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYS 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 183 SISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLP 262
Cdd:MTH00011 179 SIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMP 258
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 169787753 263 KWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYcSTITLPPNPSN 310
Cdd:MTH00011 259 KLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
23-313 |
4.55e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 143.66 E-value: 4.55e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMtnAWFTGQWditqlTYPPSCLLLTTAI 102
Cdd:MTH00197 17 SSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLY-----LSLLSVVLVILGL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 103 AIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPttILLLTSHSLNPTLLTTMSMMSIALGGWMGLNQTQTRKILAFS 182
Cdd:MTH00197 90 LLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMNQSNIRQLLAYS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 183 SISHLGWMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLP 262
Cdd:MTH00197 168 SIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFL 247
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 169787753 263 KWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYCSTITLPPNPSNKMK 313
Cdd:MTH00197 248 KWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
23-298 |
1.61e-34 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 131.78 E-value: 1.61e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLF-SSMTNAwFTGQWDITQL--------TYP 92
Cdd:COG1007 121 ANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIaaalaaggANS 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 93 P----SCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKL----PPTTILLLTSHSLNP---TLLTTMSMMS 161
Cdd:COG1007 200 PllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqLLLAVLAVLS 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 162 IALGGWMGLNQTQTRKILAFSSISHLGWM-TAIIVHNPK-LTLLTFYM--YTLMTTSIFLTL-----NTTNTLKLSTLMT 232
Cdd:COG1007 280 MTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLgVSAALFYLlaYLFMNLGAFAVIlllsrKGGEAEEIEDLAG 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169787753 233 SWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAY 298
Cdd:COG1007 360 LARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
23-296 |
8.77e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 117.05 E-value: 8.77e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLI-SKSHHPRAIEATTKYFLTQAAASTLLLFS-------------SMTNAWFTGQWDITQ 88
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVLNSGQSFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 89 LTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLltSHSLNPTLLTTMSMMSIALGGWM 168
Cdd:MTH00196 92 VSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGGLFSLFVGAIG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 169 GLNQTQTRKILAFSSISHLGWMTAIIVHNP----KLTLLTFYMYTLMTTSIFLTLNTTNTLK--LSTLMTSWTKTPTLNT 242
Cdd:MTH00196 170 ALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSGLSRRLPILAI 249
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 169787753 243 TLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRL 296
Cdd:MTH00196 250 TLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
23-296 |
1.15e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 115.30 E-value: 1.15e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQL--------TYPP 93
Cdd:PRK05777 122 ANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIakaladgsGNSL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 94 ----SCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKL----PPTTILLLTSHSLNPT---LLTTMSMMSI 162
Cdd:PRK05777 202 lllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqVLAIIAIASM 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 163 ALGGWMGLNQTQTRKILAFSSISHLGWM-TAIIVHNPK-LTLLTFYM--YTLMTTSIF--LTLNTTNTLKLSTLmTSWT- 235
Cdd:PRK05777 282 LVGNLAALSQTNIKRLLAYSSIAHAGYLlVGLAAGTAEgYSAVLFYLlaYLFMTLGAFgvISLLRRKGGEAESI-SDFAg 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169787753 236 ---KTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRL 296
Cdd:PRK05777 361 lskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.09e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 106.24 E-value: 2.09e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLI-SKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQL-TYPPSC----- 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 96 -----LLLTTAIAIKLGLAPFHFWFPEVLQGSSLT-TALLLSTIMKLPPTTILLLTS--HSLNPT---LLTTMSMMSIAL 164
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 165 GGWMGLNQTQTRKILAFSSISHLGWMTAII----VHNPKLTLLTFYMYTLMTTSIFL-----TLNTTNTLKLSTLMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 169787753 236 KTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
23-297 |
2.14e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 108.88 E-value: 2.14e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLTYPPSC------ 95
Cdd:TIGR01770 121 SNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNgmlnis 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 96 ------LLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILL-------LTSHSLNPTLLTTMSMMSI 162
Cdd:TIGR01770 201 llllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIFLAIIAFLSM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 163 ALGGWMGLNQTQTRKILAFSSISHLGW-MTAIIVHNP---KLTLLTFYMYTLMTTSIFLTL------NTTNTLKLSTLMT 232
Cdd:TIGR01770 281 LIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLegiKAVLFYIFIYALMSLGAFGVLsllrsyKDEWIEYISDFAG 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169787753 233 SWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLA 297
Cdd:TIGR01770 361 LFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
23-296 |
3.30e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 102.79 E-value: 3.30e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLTYPPSC----LL 97
Cdd:MTH00199 116 SINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINSILTGdvgkIL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 98 LTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPTLLTtmSMMSIALGGWMGLNQTQTRK 177
Cdd:MTH00199 196 ITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAIGALNQTKIKR 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 178 ILAFSSISHLGWMT--AIIVHNPKLTLLTFYM--YTLMTT---SIFLTLNTTNTLKLSTLMTSwTKTPTLNTTLMITLLS 250
Cdd:MTH00199 274 LLAYSGIGHMGFILfgVAIGSFESIQASLIYMiiYVIMSIcsfSIILSLKLTKGLIVEVSGLS-RKNPVIALTLALTFLS 352
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 169787753 251 LAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRL 296
Cdd:MTH00199 353 IAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-296 |
2.68e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.75 E-value: 2.68e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 30 WTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQL-----TYPPS-----CLLLT 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaELDPGlllaaFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 100 TAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIM-KLPP-------TTILLLTSHSLNPTLLTTMSMMSIALGGWMGLN 171
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrvlTLLFGADPALFLGTLLLVLGLLTMLVGALGALA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 172 QTQTRKILAFSSISHLGWMT-AIIVHNPK-LTLLTFYM--YTLMTTSIFLT----LNTTNTLKLSTLMTSWTKTPTLNTT 243
Cdd:COG0651 293 QRDLKRLLAYSSVSQIGYILlGLGLGTPLgLAGALFHLlnHALAKALLFLAagaiERATGTRDLDKLGGLGKRMPLTAAA 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 169787753 244 LMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRL 296
Cdd:COG0651 373 FLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
23-296 |
8.27e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 87.61 E-value: 8.27e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLISKSHHPRAI---------EATTKYFLTQAAASTLLLFSSMTNAWFTGQ---------- 83
Cdd:MTH00198 207 SANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNegmlgtilsa 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 84 ----WDITQLTYPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLppTTILLLTSHSLNPTLLTTMSM 159
Cdd:MTH00198 287 tletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITSKLLLSVAI 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 160 MSIALGGWMGLNQTQTRKILAFSSISHLGWM-------TAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTTNTL------- 225
Cdd:MTH00198 365 ISLVVGAFGALNQTRIKRLLAYSGIGHIGFIligvsagTYESLQASWTYAVTYLVSALASFTVICTLEEFGTRtptsrqr 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 226 -----------KLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGL---- 290
Cdd:MTH00198 445 dgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVALFAIictc 524
|
....*....
gi 169787753 291 ---FFYLRL 296
Cdd:MTH00198 525 isaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
2.18e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 76.97 E-value: 2.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 51 RAIEATTKYFLTQAAASTLLL--FSsmtnaWFTGQ-------WDI------TQLTYPPSCLL----LTTAIAIKLGLAPF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFS-----WLYGLsggeielQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 112 HFWFPEVLQGSSLTTALLLSTIMKLP----PTTILLLTSHSLNP---TLLTTMSMMSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:CHL00049 234 HQWTPDVYEGSPTPVVAFLSVTSKVAasalATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 185 SHLGW-MTAIIVHNPKLTLLTfyMYTLMTTSIFLTLNTTNTLKLSTLMT----------SWTKTPTLNTTLMITLLSLAG 253
Cdd:CHL00049 314 GQIGYvIIGIIVGDSNDGYAS--MITYMLFYIFMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSLGG 391
|
250
....*....|
gi 169787753 254 LPPLTGFLPK 263
Cdd:CHL00049 392 IPPLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-311 |
9.87e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 71.65 E-value: 9.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 38 LAIIP---LISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQW-----DITQLTYPPS-----CLLLTTAIAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 105 KLGLAPFHFWFPEVLQGSSLTTALLLSTIMK-----------LPpttILLLTSHSLNPTLLTtMSMMSIALGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 174 QTRKILAFSSISHLGWMT-AIIVHNPK-LTLLTFYM--YTLMTTSIFLTL----NTTNTLKLSTLMTSWTKTPTLNTTLM 245
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLlGIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFL 377
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 169787753 246 ITLLSLAGLPPLTGFLPKWLIIQELTKqemttTATIMALLSLLGLFF---YLRLAYCSTITLPPNPSNK 311
Cdd:COG1008 378 LAALASLGLPGTSGFVGEFLVLLGAFQ-----VNPWLAILAALGLILtaaYLLWMYQRVFFGPLKEELA 441
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
3.22e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 70.29 E-value: 3.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 33 LEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFS-SMTNAwFTGQWDITQLT--YPPSCLLLT------TAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAgaLAENPTVVTafgfvlLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 104 IKLGLAPFHFWFPEVLQG-SSLTTALLLSTIMKLPPTTILLLTSHSLNP---------TLLTTMSMMSIALGGWMGLNQT 173
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 174 QTRKILAFSSISHLGWMTAIIVHNPKLTLL--TFYM--YTLMTTSIFLTLN----TTNTLKLSTLMTSWTKTPTLNTTLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 169787753 246 ITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
3.95e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 63.92 E-value: 3.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 50 PRAIEATTKYFLTQAAASTLLLF-SSMTNAWFTGQWDIT----QLTYPPSCLLLTT------AIAIKLGLAPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSaialALITSPSLGLALAlvfviaGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 119 LQGSSLTTALLLSTIMKLPPTTI---LLLTSHSLNPT----LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMT 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 192 AIIVHNPK--LTLLTFYM--YTLMT----TSIFLTLNTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPK 263
Cdd:PRK02504 317 IGLVAGTEagYASMVFYLlaYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
2.45e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 61.71 E-value: 2.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 48 HHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQL-----------TYPPSCLLLTTAIAIKLGLAPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptilsspLLTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 117 EVLQGSSLTTALLLSTIM---------KLPPttILLLTSHSLnpTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHL 187
Cdd:COG1009 236 DAMEGPTPVSALLHAATMvkagvyllaRLSP--LFALSPVWL--TVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 188 GWMT---------AIIVHnpkltLLT--FYMYTL-MTT-SIFLTLNTTNTLKLSTLmtsWTKTPTLNTTLMITLLSLAGL 254
Cdd:COG1009 312 GYMFlalgvgayvAALFH-----LLThaFFKALLfLGAgSVIHATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGI 383
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 169787753 255 PPLTGFLPKWLIIQE-LTKQEMTTTATIMALLSLLGLFFY-LRLAY 298
Cdd:COG1009 384 PPFAGFFSKEAILEAaLEAGGLGPLLLAVALLGAFLTAFYsFRLFF 429
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
2.51e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.65 E-value: 2.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 33 LEINTLAIIPLIS-KSHHPRAIEATTKYFLTQAAASTLLLFSSmtnAWFTGQWDITQLTY-------PPSCL------LL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYlavkmseNPTVVakialaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 99 TTAIAIKLGLAPFHFWFPEVLQG--SSLTTALLLSTIMKLPPTTILLLTSHSLNPTLLTT------MSMMSIALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVgwviiiLGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 171 NQTQTRKILAFSSISHLGWM------TAIIVHNPKLT----------LLTFYMYTLMTTSIFLT-------LNTTNTLKL 227
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTagaviyeTGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*....
gi 169787753 228 STLMTSWTKTptlNTTLMITLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLARTMPKT---TIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
3.78e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.17 E-value: 3.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 34 EINTLA---IIPLISKshhpRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQ----LTYPPS-------CLLLT 99
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqgLINDTStgfalivFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 100 TAIAIKLGLAPFHFWFPE-----------VLQGS-SLTTALLLSTIMKLPPTTILLLT-----SHSLNPTLLTTMSMMSI 162
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 163 ALGGWMGLNQTQTRKILAFSSISHLGWmtaIIVHNPKLTLLTF-------YMYTLMTTSIFLTLNT----TNTLKLSTLM 231
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhvFNHALFKGLFFLIFAAviyrTGTTKISEMG 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 169787753 232 TSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAY 298
Cdd:PRK08668 361 GLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
6.53e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 60.44 E-value: 6.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 98 LTTAIAIKLGLA--------PFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSL--NPT---LLTTMSMMSIAL 164
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 165 GGWMGLNQTQTRKILAFSSISHLGW------------MTAIIVHnpklTLltfyMYTLMTTSIFLTL----NTTNTLKLS 228
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWivatigvgtpfaLTAAVVH----TL----AHALFKSSLFMLIgvvdHQAGTRDIR 357
|
170 180 190
....*....|....*....|....*....|....*
gi 169787753 229 TLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 358 RLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
8.29e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.95 E-value: 8.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 50 PRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQW----DITQLTYPPSC-----LLLTTAIAIKLGLAPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 120 QGSSLTTALLLSTIMKLPPTTILLL-------TSHSLNPtLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTA 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 193 IIVHNPKLTLL--TFYMYT--LMTTSIFLTLNT----TNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
....
gi 169787753 265 LIIQ 268
Cdd:TIGR01972 391 LILL 394
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
23-268 |
3.89e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 54.55 E-value: 3.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFL------TQAAASTLLLFSSMTNAWFTGQWDI--TQLTYPPS 94
Cdd:PRK06458 127 SNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDGEMAIlwTELLKHAS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 95 CL---LLTTAIAI-------KLGLAPFHFWFPE-----------VLQGSSLTTALLLSTIMKLppttILLLTSHSLNP-T 152
Cdd:PRK06458 207 LLdptLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYYI----LIDAAIGSDFPgR 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 153 LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMT-AIIVHNPKLT---LLTFYMYTLMTTSIFLT----LNTTNT 224
Cdd:PRK06458 283 LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAfALGIGGPLGIfaaLLHMLNHSLTKSAIFFAsgnvLQKYGT 362
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 169787753 225 LKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 363 RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-284 |
6.46e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.16 E-value: 6.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 81 TGQWDITQL-TYPPSCLLLTTAIAI-------KLGLAPFHFWFPEVLQGSSLTTALLLSTIM---------KLPPTtilL 143
Cdd:PRK12644 184 AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---F 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 144 LTSHSLNPTLLTtMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTAII---VHNPKLTLLTFYM-YTLMTTSIFLTL 219
Cdd:PRK12644 261 ADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgigTRDAALAGLAMLLaHALFKAALFLVV 339
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 169787753 220 ----NTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMAL 284
Cdd:PRK12644 340 giidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVL 408
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
96-272 |
1.91e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 52.52 E-value: 1.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 96 LLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTI-MKLPPTTILLLTSHSLNPTL-----LTTMSMMSIALGGWMG 169
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 170 LNQTQTRKILAFSSISHLG--------WMTAIIVHNPKLTLLTFY--MYTLMTTSIFLTL---------NTTNTLKLSTL 230
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKL 343
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 169787753 231 MTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
23-295 |
5.82e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 50.91 E-value: 5.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 23 SNHWAMAWTGLEINTLAIIPLISKSHHPRAIEATTKYFLTQAAA------STLLLFSSMTNAWFTGQWDITQLT-----Y 91
Cdd:PRK08676 121 SDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELAahaslL 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 92 PPSCLLLT-----TAIAIKLGLAPFHFWFPEV-LQGSSLTTALLLSTIMKLPPTTILLLTS-------HSLNPTLLTTMS 158
Cdd:PRK08676 201 SPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAEQFSNVLIGLG 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 159 MMSIALGGWMGLNQTQTRKILAFSSISHLGWM-TAIIVHNP-KLTLLTFYM--YTLMTTSIFLTLNTTNTLKLST----L 230
Cdd:PRK08676 281 IFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMlLGIGIGTPlALFWMLFHMlaHSLVKSGLFFSAGILHRQYRSDrfdrI 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 169787753 231 MTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLG---LFFYLR 295
Cdd:PRK08676 361 FDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
6.98e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.80 E-value: 6.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 34 EINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLTY-----PPSCLLLTTAIAIKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNallvnPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 109 A------PFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILL--------LTSHSLNPTLLTTMSMMSIALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 175 TRKILAFSSISHLGW------------MTAIIVHNPKLTLLTFYMYtLMTTSIFLTLNTTNTLKLSTLMTSwtkTPTLNT 242
Cdd:PRK06277 290 YKRLLAYHAISQGGYvaaglalgtplgIVAGIFHAINHVIYKSALF-LGAGIVSYRTKTSNLRKLGGLLPV---MPVVAF 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169787753 243 TLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.12e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 50.21 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 48 HHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLTYPPSC--------LLLTTAIAIKLGLA------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 114 WFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPT-----LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 189 WMTAI----IVHNPKLTLL--TFYMYTLMTTSIFLTL---------NTTNTLKLSTLMTSWTKTPTLNTtlmITLLSLAG 253
Cdd:PRK12649 316 YLMTMygytTYHEPGLGVAaaTFHLLNHATFKACLFLvagivaheaATRDIRKLGGLRKEMPITFIVAS---IAALAMAG 392
|
250
....*....|
gi 169787753 254 LPPLTGFLPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
1.16e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 49.95 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 103 AIKLGLAPFHFWFPEVLQG-----SSLTTALL----LSTIMKlpptTILLLTSHSLNPT--LLTTMSMMSIALGGWMGLN 171
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAppiaiAALFGALLtkvgVYAIAR----TFTLFFSHDTSFThyLILILALLTIIFGVIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 172 QTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYT----LMTTSIFLTL-------NTTNTLKLSTLMTSWtktPTL 240
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLLIgimikitGTTDLKKMGGLIKRY---PVL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 169787753 241 NTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRL 296
Cdd:PRK07691 373 GWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
6.35e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 47.89 E-value: 6.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 50 PRAIEATTKYFLTQAAASTLLLFSSMTNAWF----TGQWDITQLTYPPSCLLLTT--------AIAIKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 118 VLQ-----GSSLTTALLLST-------IMkLPpttILLLTSHSLNPtLLTTMSMMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMgaygllrFS-LP---LFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 186 HLGWMT-AIIVHNPK-LTLLTFYM--YTLMTTSIFLTLNT----TNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPL 257
Cdd:PRK05846 312 HMGFVTlGIFAGNQLgIQGAIFQMisHGLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
|
250
....*....|
gi 169787753 258 TGFLPKWLII 267
Cdd:PRK05846 392 SGFVGEFLIL 401
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-289 |
6.47e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 47.99 E-value: 6.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 91 YPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLS-TIMKLpptTILLLTShsLNPTLLTTMSMMSIAL----- 164
Cdd:PRK12647 194 YLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSaTMVKA---GIYLLAR--LNPVLGGTPLWQTILPlfggl 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 165 ----GGWMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMY----TLMTTSIFLTLNT----TNTLKLSTLMT 232
Cdd:PRK12647 269 tmltGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGG 348
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 169787753 233 SWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTkqEMTTTATIMALLSLLG 289
Cdd:PRK12647 349 LRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
7.27e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 47.64 E-value: 7.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 33 LEINTLAIIPLISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQL-TYPPSCL-LLTTAIAIKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLaTADPEAFaLIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 111 FHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPT--LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 189 WmtaiIVHNPKLTLLTFYMYTLMTTSIFL---TLNTTNTLKL-STLMTSWTKTPtlnttLMITLLSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 F----ILAAPLVGGLYALAHGLVKSTLFLcagALPSRNFTELiSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 169787753 265 LIIQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
3.00e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 45.73 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 96 LLLTTAIAIKLGLAPFHFWFPEVL-QGSSLTTALLLSTIMK-----LPPTTILLLTSHSLNpTLLTTMSMMSIALGGWMG 169
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVFAGLLTKvgvyaIIRTHTLLFPGGGLD-TLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 170 LNQTQTRKILAFSSISHLGWMT-AIIVHNPK-LTLLTFYM--YTLMTTSIFLTLN-------TTNTLKLSTLMTSwtkTP 238
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVfGIALSTVAgLSGAIYYVahHITVQTTLFLVVGlierqagSSSLRRLGGLAKA---SP 368
|
170 180 190
....*....|....*....|....*....|
gi 169787753 239 TLNTTLMITLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-325 |
6.02e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.56 E-value: 6.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 96 LLLTTAIAIKLGLAPFhFWFPEVLQGSSLTTALLLSTIMK-------LPPTTILLLTSHSLNPTLLTTMSMMSIALGGWM 168
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 169 GLNQTQTRKILAFSSISHLGWMTA-IIVHNPK-LTLLTFYMYTLMT--TSIFLTLNTTNTL----KLSTLMTSWTKTPTL 240
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLF 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 241 NTTLMITLLSLAGLPPLTGFLPKWLIIQ-ELTKQEMTTTATIMA--LLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWsT 317
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLY-R 448
|
....*...
gi 169787753 318 KKPINTLT 325
Cdd:PRK12663 449 KLPLSILA 456
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
7.26e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.56 E-value: 7.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 111 FHFWFPEVLQGSSLTTALLLSTIMKLPPTTIL-----LLTSHSLNPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 186 HLGWMTAII----VHNPKLTLLTFYMY--TLMTTSIFLTLNTTNT-----LKLSTLMTSwtkTPTLNTTLMITLLSLAGL 254
Cdd:MTH00032 324 QLGYMVLIIgiegSHNVGLFHLVNHAFfkALLFLSAGSVIHSTTVdeqdmRKMGGLIHS---IPFTYTMMLIGSFSIMGL 400
|
170
....*....|....
gi 169787753 255 PPLTGFLPKWLIIQ 268
Cdd:MTH00032 401 PYLTGFYSKDLILE 414
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-305 |
7.70e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 44.30 E-value: 7.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 95 CLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTS--HSLNPTLL---TTMSMMSIALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplFEQAPLALiivTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 170 LNQTQTRKILAFSSISHLGWMTAIIvhnpKLTLLTFYMYTLMTTSIFLTL-------------NTTNTLKLSTLMTSwtk 236
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFKALlflsagsvihalsDEQDMRKMGGLISF--- 365
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 237 TPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLS-LLGLFFYLRLAYCSTITLP 305
Cdd:MTH00020 366 LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNT 435
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-296 |
8.00e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 44.34 E-value: 8.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 96 LLLTTAIAIKLGLAPFHFWFPEVLQG---------SSLTTALLLSTIMKLPPT---TILLLTSHSLNpTLLTTMSMMSIA 163
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDvfkANFVFTTLPFN-NVFMILAALAIV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 164 LGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMY----TLMTTSIFLTLNTT----NTLKLSTLMTSWT 235
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCLNLWK 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 169787753 236 KTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSLLGLFFYLRL 296
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
30-270 |
1.07e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.01 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 30 WTGLEINTLAIIPLISKSHHPRAIeattkyFLTQAAASTLLLFSSMTNAWF-TGQWDITQLTYPPSCLLLTTAIAIKLGL 108
Cdd:PRK06459 101 WEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLPSPVPLILASFGFIIKMGM 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 109 APFHF--WFPEVLQGSSLTTALLLSTIMKLPP----TTILLLTSHSLNPTL---LTTMSMMSIALGGWMGLNQTQTRKIL 179
Cdd:PRK06459 175 MPFLVseWLPIAHGNAPSNFSAILSATMTLMGvygiLKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLL 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 180 AFSSISHLGWMTA-----IIVHNPKLTLLTFYMYTLMT---------TSIFLTLNTTNTLKLSTLMTSWTKTPTLNTTLM 245
Cdd:PRK06459 255 AFSTIENNGAILValglyMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSGLQEKQSITYSKKIRNRWIELGLTLL 334
|
250 260
....*....|....*....|....*
gi 169787753 246 ItlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 335 A--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-272 |
1.13e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 43.98 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 91 YPPSCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTIL-----LLTSHSLNPTLLTTMSMMSIALG 165
Cdd:PRK12646 209 FIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFG 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 166 GWMGLNQTQTRKILAFSSISHLGWMTAII------VHNPKLTLLTFY-------MYTLMTTSIF---------LTLNTTN 223
Cdd:PRK12646 289 SITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAG 368
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 169787753 224 TLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 369 TRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
1.60e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.15 E-value: 1.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 38 LAIIPL---ISKSHHPRAIEATTKYFLTQAAASTLLLFSSMTNAWFTG--QWDITQL---TYPPSCLLLTTA-----IAI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 105 KLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLNPTL-------LTTMSMMSIALGGWMGLNQTQTRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAwvylapwLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 178 ILAFSSISHLGWMTAIIVHNPKLTLL--TFYM--YTLMTTSIFLTL-------NTTNTLKLSTLMTSWTKTPTLNTTLMI 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILaaVFQMisHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 169787753 247 TLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-284 |
2.09e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.88 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 104 IKLGLAPFHFWFPEVLQGSSLTTALLLSTIM----KLPPTTILLLTSHSLNPTLLTTMS-------MMSIALGGWMGLNQ 172
Cdd:PRK06589 222 AKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEFnwlifipIVSIFYSSLKALKT 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 173 TQTRKILAFSSISHLGW--MTAIIVHNPKLTLLTFYMYTLMTTSI--FLTLNTTNTLK----LSTLMTSWTKTPTLNTTL 244
Cdd:PRK06589 302 DNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVSHSFAKIclFYSMGSIYSLKkedqVDKLHGTSKSFPLISFII 381
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 169787753 245 MITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMAL 284
Cdd:PRK06589 382 SISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
3.09e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.60 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 101 AIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTI-MKLP-------PTTILLLTSHSLNPTLLtTMSMMSIALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGgyglvrlSWPILPLGAQNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 173 TQTRKILAFSSISHLGWMTAIIVHNPKLTLLTFYMYTL---MTTSIFLTLNTTNTLKLSTLMTSWTK-----TPTLNTTL 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 169787753 245 MITLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
3.10e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.33 E-value: 3.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 55 ATTKYFLTQAAASTLLLFSSMTNAWFTGQ--WDITQLT---YPPSCLLLT-----TAIAIKLGLAPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 124 LTTALLLSTIMKLPPTTI------LLLTSHSLNPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWM------- 190
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVllgiaaf 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 191 TAIIVHNPKLTLLTfymYTLMTTSIFL----TLNTTNTL---KLSTLMTSWTKTPTLNTTlmITLLSLAgLPPLTGFLPK 263
Cdd:PRK12561 298 TDLGISGAMLQMIS---HGLIAAALFFltgvTYERTHTLsipNMGGLAKVMPKTFALFTA--SSMASLA-LPGMSGFVSE 371
|
250 260
....*....|....*....|....*....
gi 169787753 264 WLIIQELTKQEMTTTA--TIMALLSLLGL 290
Cdd:PRK12561 372 LTVFLGITSSDVYSSTfrTITILLAAVGL 400
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
5.49e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 41.67 E-value: 5.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 82 GQWDITQLTYPPSCLLLTTAIAI----KLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILL-----LTSHSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIrfypfLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 153 LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLG-WMTAIIVHNPKLTLLTFYMYTLMTTSIFLTLNTT-----NTLK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 169787753 227 LSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
6.53e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.64 E-value: 6.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 59 YFLTQAAASTLLLFSSMTNAWF-TGQWDITQLTYPP-----SCLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIqTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 133 IM-KLPPTTILLLTSHSLNP-----TLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLG--------WMTAIIVHNP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 199 KLTLLTF-------YMYTLMTTSIFLT----LNTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK08667 326 TLALLALggalfhsLNHALFKSLLFLTagsvVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
250 260
....*....|....*....|....*
gi 169787753 268 QELTKQEMTTTATIMALL-SLLGLF 291
Cdd:PRK08667 406 ESFFQSFSVADPLIKILLfSVLAIF 430
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.79e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.08 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 55 ATTKYFLTQAAASTLLLFSSMTNAWFTGQWD------ITQLTYPPSCLLLTTAI----AIKLGLAPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 125 TTALLLSTIMKLPPTTILLLTSHSLNPTL-------LTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQLFPQTwslvapgLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 198 PKLTLLTfYMYTLMTTSIFLTL------------NTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07363 318 TQLSLLG-AVAQMISHGLILALlfhlvgiverkvGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
...
gi 169787753 266 IIQ 268
Cdd:PRK07363 397 VFQ 399
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
75-285 |
4.76e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 38.74 E-value: 4.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 75 MTNAWF---TGQWDITQ--LTYPPSCLLL---TTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPpTTILLLTS 146
Cdd:MTH00066 182 LSMAWLamnTNSWELQQifLLNDNSTLPLlglILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVA-GIFLLIRF 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 147 HSL---NPTLLTT---MSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHN-PKLTLL-----TFY--MYTLMT 212
Cdd:MTH00066 261 HPLlenNQTALTIclcLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPQLAFFhicthAFFkaMLFLCS 340
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169787753 213 TSIFLTLNTTNTLKLstlMTSWTKT-PTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALL 285
Cdd:MTH00066 341 GSIIHSLNDEQDIRK---MGGLQKAlPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLI 411
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
78-300 |
6.26e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.47 E-value: 6.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 78 AWFT--GQWDITQLTYPPS-----CLLLTTAIAIKLGLAPFHFWFPEVLQGSSLTTALLLSTIMKLPPTTILLLTSHSLN 150
Cdd:MTH00209 154 AWMLmhGNWNIFYLNFNSNlgsviSVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 151 PTLLTTMSMMSIA-----LGGWMGLNQTQTRKILAFSSISHLGWMTAIIVHN-PKLTLLTFYMYTLMTTSIFLTL----- 219
Cdd:MTH00209 234 SSPFFSMSLLLLGslttlMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAgniih 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787753 220 NTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIMALLSL-LGLFFYLRLAY 298
Cdd:MTH00209 314 SHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSY 393
|
..
gi 169787753 299 CS 300
Cdd:MTH00209 394 FS 395
|
|
| |
