|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-230 |
1.79e-161 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 450.77 E-value: 1.79e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00156 126 GQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNI 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00156 206 DKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALV 285
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFIIN 230
Cdd:MTH00156 286 MSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-229 |
2.38e-69 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 218.12 E-value: 2.38e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGN 79
Cdd:COG1290 147 DQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERK 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 80 IEK----IPFHPYFTFKDLITVVLMtsLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIP--NKL 153
Cdd:COG1290 227 KTEkvdgVPFHPYYTVKDGFGFFVF--LGVFALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKL 304
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 179283191 154 GGVIALFLSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPveEPYIMTGQILTVIYFTYFII 229
Cdd:COG1290 305 GGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
72-218 |
5.55e-50 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 160.50 E-value: 5.55e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 72 NPLGLNGNIEKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPN 151
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 179283191 152 KLGGVIALFLSISILMILPFYNKTPFRGiQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQI 218
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
123-223 |
1.67e-44 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 144.93 E-value: 1.67e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 123 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTW 202
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 179283191 203 IGKRPVEEPYIMTGQILTVIY 223
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
97-204 |
1.91e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 54.80 E-value: 1.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 97 VVLMTSL--LIMLCLINPYLLGDPdnfvpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYN- 173
Cdd:TIGR01156 42 VVILGTIacVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEn 116
|
90 100 110
....*....|....*....|....*....|....*
gi 179283191 174 ----KTPFRgiqfYPINQVLFWIMVVVVcllTWIG 204
Cdd:TIGR01156 117 vnkfQNPFR----RPVATTVFLFGTVVA---LWLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-230 |
1.79e-161 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 450.77 E-value: 1.79e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00156 126 GQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNI 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00156 206 DKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALV 285
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFIIN 230
Cdd:MTH00156 286 MSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-241 |
1.37e-138 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 393.89 E-value: 1.37e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00145 137 GQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDG 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00145 217 DKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALV 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFIINVHVANMWDKL 240
Cdd:MTH00145 297 MSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNI 376
|
.
gi 179283191 241 I 241
Cdd:MTH00145 377 L 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-242 |
5.10e-131 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 374.78 E-value: 5.10e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00016 137 GQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNS 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00016 217 DKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMF 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFIINVHVANMWDKL 240
Cdd:MTH00016 297 ASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKL 376
|
..
gi 179283191 241 IK 242
Cdd:MTH00016 377 LK 378
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-229 |
7.06e-130 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 371.17 E-value: 7.06e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00191 133 GQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDS 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00191 213 DKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALV 292
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFII 229
Cdd:MTH00191 293 MSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-229 |
1.42e-128 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 368.46 E-value: 1.42e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00119 137 GQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNT 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00119 217 DKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALA 296
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFII 229
Cdd:MTH00119 297 ASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-229 |
7.79e-127 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 363.97 E-value: 7.79e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00131 136 GQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDA 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00131 216 DKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALL 295
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFII 229
Cdd:MTH00131 296 FSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-242 |
1.24e-125 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 360.92 E-value: 1.24e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00074 137 GQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNP 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00074 217 DKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALL 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFIINVHVANMWD-K 239
Cdd:MTH00074 297 ASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEnK 376
|
...
gi 179283191 240 LIK 242
Cdd:MTH00074 377 LLK 379
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-236 |
8.43e-125 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 358.95 E-value: 8.43e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00100 136 GQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDS 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00100 216 DKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALL 295
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFIINVHVANM 236
Cdd:MTH00100 296 LSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASL 371
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-229 |
2.84e-113 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 329.74 E-value: 2.84e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00034 136 GQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNY 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00034 216 DKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALV 295
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFII 229
Cdd:MTH00034 296 AAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-242 |
1.53e-108 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 317.63 E-value: 1.53e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00224 137 GQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADS 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00224 217 ARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALF 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFIINVHVANMWDKL 240
Cdd:MTH00224 297 AAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDL 376
|
..
gi 179283191 241 IK 242
Cdd:MTH00224 377 LN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-229 |
6.73e-107 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 313.56 E-value: 6.73e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00022 135 GQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSV 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00022 215 DKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMF 294
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFII 229
Cdd:MTH00022 295 FSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-242 |
5.97e-105 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 308.56 E-value: 5.97e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00053 137 GQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDI 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00053 217 DKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALV 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 161 LSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFIINVHVANMWD-K 239
Cdd:MTH00053 297 FSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEnK 376
|
...
gi 179283191 240 LIK 242
Cdd:MTH00053 377 LLK 379
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-229 |
8.73e-78 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 238.30 E-value: 8.73e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00086 125 AQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDY 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTsLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALF 160
Cdd:MTH00086 205 DKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALL 283
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 179283191 161 LSISILMILPFYNktpFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVIYFTYFII 229
Cdd:MTH00086 284 MSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-243 |
2.29e-75 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 233.29 E-value: 2.29e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI 80
Cdd:MTH00033 133 GQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLS 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLClINPY---LLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVI 157
Cdd:MTH00033 213 DRTAFHVYFTIKDILGFLILFGVFVIIG-IEPRietLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 158 ALFLSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPV-EEPYIMTGQILTVIYFTYFIINVHVANM 236
Cdd:MTH00033 292 ALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGY 371
|
....*..
gi 179283191 237 WDKLIKE 243
Cdd:MTH00033 372 LSNLFYE 378
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-229 |
2.38e-69 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 218.12 E-value: 2.38e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGN 79
Cdd:COG1290 147 DQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERK 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 80 IEK----IPFHPYFTFKDLITVVLMtsLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIP--NKL 153
Cdd:COG1290 227 KTEkvdgVPFHPYYTVKDGFGFFVF--LGVFALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKL 304
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 179283191 154 GGVIALFLSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTWIGKRPveEPYIMTGQILTVIYFTYFII 229
Cdd:COG1290 305 GGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
2-222 |
3.70e-51 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 170.16 E-value: 3.70e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 2 QMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPLGLNGNI- 80
Cdd:MTH00046 128 QMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYs 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 81 EKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIaLF 160
Cdd:MTH00046 208 DVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LV 286
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 179283191 161 LSISILMILPFYNKTPFRGIqfypINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQILTVI 222
Cdd:MTH00046 287 LSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
72-218 |
5.55e-50 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 160.50 E-value: 5.55e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 72 NPLGLNGNIEKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRSIPN 151
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 179283191 152 KLGGVIALFLSISILMILPFYNKTPFRGiQFYPINQVLFWIMVVVVCLLTWIGKRPVEEPYIMTGQI 218
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
123-223 |
1.67e-44 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 144.93 E-value: 1.67e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 123 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQVLFWIMVVVVCLLTW 202
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 179283191 203 IGKRPVEEPYIMTGQILTVIY 223
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-118 |
1.83e-29 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 108.48 E-value: 1.83e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHF-VLPFVIAAMAAIHLFFLHQTGSNNPLGLNGN 79
Cdd:pfam13631 51 DLLSGTGLRIGLGILSSIPVVGTWLVWLLFGGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKN 130
|
90 100 110
....*....|....*....|....*....|....*....
gi 179283191 80 IEKIPFHPYFTFKDLITVVLMTSLLIMLCLINPYLLGDP 118
Cdd:pfam13631 131 VVGVPFWPVFAVKMLLFFLITVALLIGLAQINPIWLGGP 169
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-71 |
1.27e-27 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 104.76 E-value: 1.27e-27
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSN 71
Cdd:cd00284 130 GQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-69 |
7.13e-25 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 97.07 E-value: 7.13e-25
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 179283191 1 GQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTG 69
Cdd:pfam00033 121 GQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
96-171 |
7.72e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 58.65 E-value: 7.72e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 179283191 96 TVVLMT-SLLIMLCLINPYLLGDPdnfvpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF 171
Cdd:COG5679 43 VVILGTiALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPF 114
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
97-200 |
4.57e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 56.55 E-value: 4.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 97 VVLMT-SLLIMLCLINPYLLGDPdnfvpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF---Y 172
Cdd:CHL00058 43 VILGTiACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFlenV 117
|
90 100 110
....*....|....*....|....*....|
gi 179283191 173 NK--TPFRgiqfYPINQVLFWIMVVVVCLL 200
Cdd:CHL00058 118 NKfqNPFR----RPVATTVFLIGTAVALWL 143
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
97-204 |
1.91e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 54.80 E-value: 1.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 179283191 97 VVLMTSL--LIMLCLINPYLLGDPdnfvpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYN- 173
Cdd:TIGR01156 42 VVILGTIacVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEn 116
|
90 100 110
....*....|....*....|....*....|....*
gi 179283191 174 ----KTPFRgiqfYPINQVLFWIMVVVVcllTWIG 204
Cdd:TIGR01156 117 vnkfQNPFR----RPVATTVFLFGTVVA---LWLG 144
|
|
| petB |
CHL00070 |
cytochrome b6 |
2-74 |
9.74e-08 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 50.87 E-value: 9.74e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 179283191 2 QMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPL 74
Cdd:CHL00070 142 QIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
2-74 |
2.20e-07 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 50.10 E-value: 2.20e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 179283191 2 QMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPL 74
Cdd:PRK03735 150 QKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
|