|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.19e-164 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 463.14 E-value: 1.19e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 1 MNPQAKLLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLALMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 161 STALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQTNKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 224998617 321 TSMTITTFITLSTMLLPLSPMIFTIL 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.00e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 396.48 E-value: 2.00e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 1 MNPQAKLLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSlNPTLLALMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 161 STALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQT-NK 319
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLpST 319
|
330 340
....*....|....*....|....*..
gi 224998617 320 STSMTITTFITLSTMLLPLSPMIFTIL 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.16e-136 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 391.98 E-value: 1.16e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 1 MNPQAKLLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLALMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 161 STALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQTNKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 224998617 321 TSMTITTFITLSTMLLPLSPMIFTIL 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.73e-125 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 363.78 E-value: 1.73e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 1 MNPQAKLLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLALMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 161 STALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATITLPPnSTNHMK-QWQTNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFEN 319
|
330 340
....*....|....*....|....*..
gi 224998617 320 STSMT-ITTFITLSTMLLPLSPMIFTI 345
Cdd:MTH00105 320 TKPMTlLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.27e-100 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 299.96 E-value: 2.27e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 1 MNPQAKLLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLALMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 161 STALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQTNKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 224998617 321 TSMTITTFITLSTMLLPLSPMIFTIL 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
2.54e-85 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 261.40 E-value: 2.54e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 1 MNPQAKLLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLALMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 161 STALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQTNKS 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 224998617 321 TSMTITTFITLSTMLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.33e-64 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 206.98 E-value: 2.33e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 1 MNPQAKLLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 tgqwdITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTspsLNPTLLALMAIA 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 161 STALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCAtITLPPNSTNHMKQWQTNKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 224998617 321 tSMTITTFITLSTMLLPLSPMIFTI 345
Cdd:MTH00160 312 -SLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
4.98e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 180.08 E-value: 4.98e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 5 AKLLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 85 DITqlthptscLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNP-TLLALMAIASTA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 164 LGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTiKTLKLTTMSTAWTKIPPLTAT 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 224998617 244 LMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATI 302
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-310 |
6.35e-50 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 169.58 E-value: 6.35e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 7 LLSITSLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSmtnawhTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 87 TQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLALMAIASTALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 167 WSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPLTATLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 224998617 247 MLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYcATITLPPNSTN 310
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-298 |
1.19e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 155.60 E-value: 1.19e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 12 SLFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWHTgqwditqLTH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 92 PTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPitLFLLTSPSLNPTLLALMAIASTALGGWSGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 172 QTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLTTMSTAWTKIPPLTATLMLMLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 224998617 252 AGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
15-298 |
2.23e-32 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 125.61 E-value: 2.23e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 15 LGTTIAISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQATASALLLF-SSMTNAWhTGQWDITQLTHP 92
Cdd:COG1007 113 LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 93 TS------------CLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALK----FPPITLFLLTSPSLNP---TL 153
Cdd:COG1007 192 LAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 154 LALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLL----YCLMTTPIFLTLNTIK-----T 224
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFyllaYLFMNLGAFAVILLLSrkggeA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 224998617 225 LKLTTMSTAWTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAY 298
Cdd:COG1007 352 EEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
15-296 |
2.22e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 114.53 E-value: 2.22e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 15 LGTTIAISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQATASALLL--------------FSSMTNAW 79
Cdd:PRK05777 114 LGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKAL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 80 HTGQWDITQLThpTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALK---FPPIT-LFLLTSPSLNPT--- 152
Cdd:PRK05777 194 ADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqq 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 153 LLALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCL----MTTPIF--LTLNTIKTLK 226
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLaylfMTLGAFgvISLLRRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 224998617 227 LTTMST----AWTKiPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRL 296
Cdd:PRK05777 352 AESISDfaglSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
3.70e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.47 E-value: 3.70e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 23 SNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 91 HPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLA-TALKFPPITLFLLTSPSLNPT-----LLALMAIASTAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLIRRSLLYLPSSpfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 165 GGWSGLNQTQTRKILAFSSISHLGWMTIIL----VYNPKLTLISFLLYCLMTTPIFL-----TLNTIKTLKLTTMSTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 224998617 236 KIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
4.47e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 106.65 E-value: 4.47e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 15 LGTTIAISSNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQATASALLLFS-------------SMTNAWH 80
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATAlkfPPITLF-LLTSPSLNPTLLALMAI 159
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIV---PKLGIFsILVSIGLNVNILLIGGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 160 ASTALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNP----KLTLISFLLYCLMTTPIF---LTLNTIKTLkLTTMST 232
Cdd:MTH00196 161 FSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 224998617 233 AWTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
7-297 |
5.55e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 105.03 E-value: 5.55e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 7 LLSITSLFLgttiAISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWD 85
Cdd:TIGR01770 109 LFALLGIFL----LVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 86 ITQLTHPTSC------------LLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALK----FPPITLFLLTSPSL 149
Cdd:TIGR01770 185 FEDLLLFLSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaifAVFLRLFLYILFGF 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 150 NPT---LLALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWMtIILVYNPKLTLISFLL-----YCLMTTPIFLTLNT 221
Cdd:TIGR01770 265 SEAwqiFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYI-LIGLLAGTLEGIKAVLfyifiYALMSLGAFGVLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 222 IKTLK------LTTMSTAWTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLR 295
Cdd:TIGR01770 344 LRSYKdewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
..
gi 224998617 296 LA 297
Cdd:TIGR01770 424 VV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
15-337 |
1.25e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 100.86 E-value: 1.25e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 15 LGTTIAISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDI----TQL 89
Cdd:MTH00199 108 LGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSIL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 90 THPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLAlmAIASTALGGWSG 169
Cdd:MTH00199 188 TGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAIGA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 170 LNQTQTRKILAFSSISHLGWMTIILVYNP----KLTLISFLLYCLMTTPIF---LTLNTIKTLkLTTMSTAWTKIPPLTA 242
Cdd:MTH00199 266 LNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSRKNPVIAL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 243 TLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYcaTITLPPNSTnhMKQWQT----- 317
Cdd:MTH00199 345 TLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQ--IIYFQADYS--ILIWQKvlkke 420
|
330 340
....*....|....*....|....*
gi 224998617 318 -----NKSTSMTITTFITLSTMLLP 337
Cdd:MTH00199 421 erldlSKSILIGVTFFIILFLMISP 445
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
4.69e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.37 E-value: 4.69e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 13 LFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDITQLTH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 92 ---------PTSCLLLTTAISIKLGLVPFHFWFPE-----------VLQGTSLTTGL--LLATALKFPPITLFLLTSPsl 149
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFLGT-- 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 150 nptLLALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYC----LMTTPIFLT----LNT 221
Cdd:COG0651 274 ---LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiERA 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 224998617 222 IKTLKLTTMSTAWTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRL 296
Cdd:COG0651 351 TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
2.10e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 80.29 E-value: 2.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 15 LGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAI---------EAATKYFLVQATASALLLFSSMTNAWHTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 84 --WDITQLTHPTS----------CLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFppITLFLLTSPSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 152 TLLALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWM----------------TIILVYNPKlTLISFLLYCLM---- 211
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIligvsagtyeslqaswTYAVTYLVS-ALASFTVICTLeefg 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 212 ------TTPIFLTLNTIKTLKLTTMSTAWTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMT---PIATII 282
Cdd:MTH00198 436 trtptsRQRDGSFGNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSsslSIYYLV 515
|
330
....*....|....*...
gi 224998617 283 ALLSLL----GLFFYLRL 296
Cdd:MTH00198 516 ALFAIIctciSAFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-322 |
2.15e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 73.88 E-value: 2.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 51 RAIEAATKYFLVQATASALLL--FSSM--TNAWHTGQWDI------TQLTHPTSCLL----LTTAISIKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 117 EVLQG-----------TSLTTGLLLATalkfppiTLFLLTSPSLNP---TLLALMAIASTALGGWSGLNQTQTRKILAFS 182
Cdd:CHL00049 239 DVYEGsptpvvaflsvTSKVAASALAT-------RIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYS 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 183 SISHLGWMTI-ILVYNPKLTLISFLLYclMTTPIFLTLNTIKTLKLTTMSTA----------WTKIPPLTATLMLMLLSL 251
Cdd:CHL00049 312 SIGQIGYVIIgIIVGDSNDGYASMITY--MLFYIFMNLGTFACIVLFGLRTGtdnirdyaglYTKDPFLALSLALCLLSL 389
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 224998617 252 AGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQTNKSTS 322
Cdd:CHL00049 390 GGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRS 460
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-307 |
3.83e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 66.83 E-value: 3.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFS-SMTNAwHTGQWDITQLTH--PTSCLLLT------TAIS 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTafgfvlLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 104 IKLGLVPFHFWFPEVLQGTS-LTTGLLLATALKFP--PITLFLLT--------SPSLNpTLLALMAIASTALGGWSGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPpVVTALLSGLVTKVAvyALIRIYFTvfggdfrfALGLG-WLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 173 TQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLY----CLMTTPIFLTLNTI----KTLKLTTMSTAWTKIPPLTATL 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHllhhALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAF 372
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 224998617 245 MLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAYCATITLPPN 307
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-300 |
1.16e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.42 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLVQATASALLLFS---------SMTNAWHTGQWDITQLTHPTSCL-LLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 102 ISIKLGLVPFHFWFPEVLQG--TSLTTGLLLATALKFPPI--TLFLLTSPSLNPT----LLALMAIASTALGGWSGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 174 QTRKILAFSSISHLGWMTI-----ILVY-NPKLTLISFLL----------YCLMTTPIFLT----LNTIKTLKLTTMSTA 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALgDPAMASYGEIAlaggiyhivnHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 224998617 234 WTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQelTKQEMTPIATIIALL-SLLGLFFYLRLAYCA 300
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIgSVLTLASFVKVFHTA 455
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.22e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 61.61 E-value: 2.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 50 PRAIEAATKYFLVQATASALLLF-SSMTNAWHTGQwdiTQL--------THPTSCLLLT-----TAISIKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSLGLALAlvfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 116 PEVLQGT-----------SLTTGLLLAtalkfppITLFLLTSPSLNP---TLLALMAIASTALGGWSGLNQTQTRKILAF 181
Cdd:PRK02504 234 PDVYEGSptpvvaflsvgSKAAGFALA-------IRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAY 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 182 SSISHLGWMTIILVYNPKLTLISFLLYCLM---------TTPIFLTLNTiKTLKLTTMSTAWTKIPPLTATLMLMLLSLA 252
Cdd:PRK02504 307 SSIGQAGFVMIGLVAGTEAGYASMVFYLLAylfmnlgafACVILFSLRT-GTDQISDYAGLYQKDPLLTLGLSLCLLSLG 385
|
250
....*....|.
gi 224998617 253 GLPPLTGFLPK 263
Cdd:PRK02504 386 GIPPLAGFFGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-288 |
4.16e-09 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 57.78 E-value: 4.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 49 HPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQW--DITQLTH---PTS-----CLLLTTAISIKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 119 LQ-----GTSLTTGLLLATA----LKFPpITLFLLTSPSLNPTLLALmAIASTALGGWSGLNQTQTRKILAFSSISHLGW 189
Cdd:COG1008 236 HVeaptaGSVLLAGVLLKMGgyglLRFA-LPLFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 190 MTI-ILVYNPK------LTLISFllyCLMTTPIFLTLNTI----KTLKLTTMSTAWTKIPPLTATLMLMLLSLAGLPPLT 258
Cdd:COG1008 314 VLLgIFALNPLglqgavLQMVSH---GLITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
250 260 270
....*....|....*....|....*....|
gi 224998617 259 GFLPKWLIIQELTKQemTPIATIIALLSLL 288
Cdd:COG1008 391 GFVGEFLVLLGAFQV--NPWLAILAALGLI 418
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
4.35e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 58.13 E-value: 4.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 29 AWtglEINTLAILPLISKSHhPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDITQLTHPTS-----------CLL 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 98 LTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSL--NPT---LLALMAIASTALGGWSGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 173 TQTRKILAFSSISHLGWM-TIILVYNP-KLT--LISFLLYCLMTTPIFLTLNTIK----TLKLTTMSTAWTKIPPLTATL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 224998617 245 MLMLLSLAGLPPLTGFLPKWLIiqeLTKQEMTPI--ATIIALLSLLGLFFYLRLAYCATITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGM---LTAFLEAPGgnAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
12-298 |
5.36e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.47 E-value: 5.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 12 SLFLG--TTIAISSNHWMMaWTGLEINTLAILPLISKSHH-PRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDITQ 88
Cdd:COG1009 118 LLFMAamLGLVLSDNLLLL-FVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSE 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 89 L-----THPTSCLLLTTAISI------KLGLVPFHFWFPEVLQG-----------TSLTTGL-LLAtalKFPPItlFLLT 145
Cdd:COG1009 197 LlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLPDAMEGptpvsallhaaTMVKAGVyLLA---RLSPL--FALS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 146 spslnPTLLALMAI--ASTAL-GGWSGLNQTQTRKILAFSSISHLGWMTIILVynpkLTLISFLLYCLMTTPIFLTL--- 219
Cdd:COG1009 272 -----PVWLTVVAIigAITALfAALIALAQTDIKRVLAYSTVSQLGYMFLALG----VGAYVAALFHLLTHAFFKALlfl 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 220 ------NTIKTLKLTTMSTAWTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQE-LTKQEMTPIATIIALL-SLLGLF 291
Cdd:COG1009 343 gagsviHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAF 422
|
....*..
gi 224998617 292 FYLRLAY 298
Cdd:COG1009 423 YSFRLFF 429
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
1.03e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.86 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 96 LLLTTAISiKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLN------PTLLALmAIASTALGGWSG 169
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFAdvpvwrPTVLVL-GLATMLLGGWRA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 170 LNQTQTRKILAFSSISHLGWMTIILVYNPK------LTLIsfLLYCLMTTPIFLTLNTIK----TLKLTTMSTAWTKIPP 239
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAML--LAHALFKAALFLVVGIIDhstgTRDIRKLSGLGRRQPV 363
|
170 180
....*....|....*....|....
gi 224998617 240 LTATLMLMLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 364 LAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-288 |
1.46e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 56.10 E-value: 1.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 50 PRAIEAATKYFLVQATASALLLFSSMTNAWHTGQW----DITQLTHPTSC-----LLLTTAISIKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 120 QGTSLTTGLLLATALKFPP-------ITLFLLTSPSLNPTLLALmAIASTALGGWSGLNQTQTRKILAFSSISHLGWMTI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTygflrfnLPLFPDASLYFAPVLAAL-GVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 193 ILVYNPKLTLISFLLYC----LMTTPIFLTLNTI----KTLKLTTMSTAWTKIPPLTATLMLMLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....
gi 224998617 265 LIIQELTKqeMTPIATIIALLSLL 288
Cdd:TIGR01972 391 LILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
9.79e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.77 E-value: 9.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 109 VPFHFWFPEVLQG-TSLTTGLLLATALKfPPITLFLLTSPSLNPT-----LLALMAIASTALGGWSGLNQTQTRKILAFS 182
Cdd:PRK12647 212 FPFHFWLPNAMEApTPVSAYLHSATMVK-AGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 183 SISHLGWMTIILVYNPKLTLISFLLY----CLMTTPIFLTLNTIK----TLKLTTMSTAWTKIPPLTATLMLMLLSLAGL 254
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
170 180 190
....*....|....*....|....*....|....*
gi 224998617 255 PPLTGFLPKWLIIQELTkqEMTPIATIIALLSLLG 289
Cdd:PRK12647 371 PPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-294 |
9.85e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 53.46 E-value: 9.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 34 EINTLAILPLISKSHHpRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDIT-------QLTHPTSCLLLTTAISI-- 104
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIVFLFLLAfg 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 105 --KLGLVPFHFWFPE-----------VLQGTSLTTG---LLLATALkFPPITLFL-----LTSPSLNPTLLALMAIaSTA 163
Cdd:PRK08668 207 vaKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaygFLLVLYV-LPGTKLFSefgtyRGVPLFNYILAWLGNI-SII 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 164 LGGWSGLNQTQTRKILAFSSISHLGWmtiILVYNPKLTLISF-------LLYCLMTTPIFLTLNTI----KTLKLTTMST 232
Cdd:PRK08668 285 VGTLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhvFNHALFKGLFFLIFAAViyrtGTTKISEMGG 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 224998617 233 AWTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMtPIATIIALLSLLGLFFYL 294
Cdd:PRK08668 362 LIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM-PITAFMAFFGSIGSFLYV 422
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
2.14e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 46.87 E-value: 2.14e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 224998617 291 FFYLRLAYCATITLPPNSTNHMKQWQTNKSTSMT-ITTFITLSTMLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
2.26e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 48.98 E-value: 2.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 13 LFLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATA------SALLLFSSMTNAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 87 TQLTHPT----------SCLLLTTAISIKLGLVPFHFWFPEV-LQGTSLTTGLLLATALKFPPITLFLLTS--------P 147
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaaE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 224998617 148 SLNPTLLALmAIASTALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYCL 210
Cdd:PRK08676 271 QFSNVLIGL-GIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
3.18e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.58 E-value: 3.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFS-----SMTNAWHTGqwDITQLTHP--------TSCLLLT 99
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMG--DMFLIIQDlptnraiqIGVLFIM 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 100 TAISIKLGLVPFHFWFPEV-----------LQGTSLTTGLLLATALKFPPI-TLFLLTSPSLNPTLLALMAIAsTALGGW 167
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAyseapsfisvfFSGTSTKVMIYLIIRIVYDVFkANFVFTTLPFNNVFMILAALA-IVFGSV 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 168 SGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLY----CLMTTPIFLTLNTIK----TLKLTTMSTAWTKIPP 239
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPK 375
|
250 260
....*....|....*....|....*...
gi 224998617 240 LTATLMLMLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
3.33e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 48.41 E-value: 3.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDITQLTH--PTSCLLLTTAISIKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 111 FHFWFPEVLQGTSLTTGLLLATALK----FPPITLFLLtSPSLNPtLLALMAIASTALGGWSGLNQTQTRKILAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVkagvFPLVRCALD-VPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 187 LGWmtiiLVYNPKLTLISFLLYCLMTTPIFLTLNTIKTLKLT----TMSTAWTKIPpltatLMLMLLSLAGLPPLTGFLP 262
Cdd:PRK07234 281 LGF----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFTelisQMLGIGKWIP-----LTMASFSIAGFPLLAGFVS 351
|
....*....
gi 224998617 263 KWLIIQELT 271
Cdd:PRK07234 352 KVLTLKNLL 360
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
3.18e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.41 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 34 EINTLAILPLISKSHHPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDITQ-----LTHPTSCLLLTTAISIKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 109 V------PFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLT---------SPSLNPTLLALmAIASTALGGWSGLNQT 173
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgglsyFPSAQGVLIAL-SVLAMVFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 174 QTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYC----LMTTPIFLTLNTI----KTLKLTTMSTAWTKIPPLTATLM 245
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVL 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 224998617 246 LMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRLAY 298
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-298 |
7.57e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 44.30 E-value: 7.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 95 CLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLALMAIA-----STALGGWSG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 170 LNQTQTRKILAFSSISHLGWMTIILvynpKLTLISFLLYCLMTTPIFLTL------NTIKTL----KLTTMSTAWTKIPP 239
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFKALlflsagSVIHALsdeqDMRKMGGLISFLPL 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 240 LTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLS-LLGLFFYLRLAY 298
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
8.87e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.17 E-value: 8.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 103 SIKLGLVPFHFWFPE----------VLQGTSLTTGLLLATALKFppiTLFLLTSPSLNPTLLALMAIASTALGGWSGLNQ 172
Cdd:PRK07691 220 ATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAY 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 173 TQTRKILAFSSISHLGWMTIILVYNPKLTLISFLLYC----LMTTPIFLTLNTI----KTLKLTTMSTAWTKIPPLTATL 244
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLLIGIMikitGTTDLKKMGGLIKRYPVLGWMF 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 224998617 245 MLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTPIATIIALLSLLGLFFYLRL 296
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-192 |
9.81e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 44.04 E-value: 9.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 50 PRAIEAATKYFLVQATASALLLFSSMTNAWH----TGQWDITQLTHPTSCLLLTT--------AISIKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 118 VLQ-----GTSLTTGLLLATA----LKFPpITLFLLTSPSLNPTLLALmAIASTALGGWSGLNQTQTRKILAFSSISHLG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGayglLRFS-LPLFPDASHEFAPIIITL-GVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
....
gi 224998617 189 WMTI 192
Cdd:PRK05846 315 FVTL 318
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
1.16e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 43.99 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 82 GQWDITQLTHPTSCLLLTTAISI----KLGLVPFHFWFPEVLQGTSLTTGLL----LATALKFPPITLF-LLTSPSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVhsstLVTAGVFLLIRFYpFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 153 LLALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWMTIILVYN-PKLTLISFLLYCLMTTPIFLTLNTI-----KTLK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 224998617 227 LTTMSTAWTKIPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
1.31e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.79 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 92 PTSCLLLTTAI--SIKLGLvpfHFWFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPTLLALMAI----ASTAL- 164
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgALTAFf 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 165 GGWSGLNQTQTRKILAFSSISHLGWMTIILVY--NPKLTLISFLLYCLMTTPIFLTLN------TIKTLKLTTMSTAWTK 236
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGsvihstTVDEQDMRKMGGLIHS 382
|
170 180 190
....*....|....*....|....*....|..
gi 224998617 237 IPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
12-192 |
1.87e-04 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 42.99 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 12 SLFLGTT-IAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYF---------------LVQATASALLLFSSM 75
Cdd:PRK06458 115 QLFLFTMlLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMGDGEM 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 76 TNAW-----HTGQWDITQLTHPTSCLLLttAISIKLGLVPFHFWFP----EVLQGTS-LTTGLLLATALkFPPITLFLLT 145
Cdd:PRK06458 195 AILWtellkHASLLDPTLMKLAFVFLLI--GFGTKVGLFPMHAWLPdahsEAPSPVSaLLSGVLLNVAL-YAVLRYYILI 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 224998617 146 SPSLNP----TLLALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWMTI 192
Cdd:PRK06458 272 DAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-298 |
1.93e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 43.01 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 92 PTSCLLLTTAISIKLGLVPFhFWFPEVLQGTSLTTGLLLATALK-------FPPITLFLLTSPSLNPTLLALMAIASTAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 165 GGWSGLNQTQTRKILAFSSISHLGWMTIILVYNPKLTL---ISFLLYCLMT-TPIFLTLNTIKTL----KLTTMSTAWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGIngaIFYLVHDMVVkTALFLIAGSLVRLtgyrSLQYLGGLYRK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 224998617 237 IPPLTATLMLMLLSLAGLPPLTGFLPKWLIIQ-ELTKQEMTPIATIIA--LLSLLGLFFYLRLAY 298
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAY 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-190 |
4.06e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 41.99 E-value: 4.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 55 AATKYFLVQATASALLLFSSMTNAWHTG-------QWDITQLTHPTSCLLLT---TAISIKLGLVPFHFWFPEVLQGTSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGassfdyePLRSHTLPLSTQLLLLApilVGFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 224998617 125 TTGLLLATAL---------KFPpITLFLLTSPSLNPTLlALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWM 190
Cdd:PRK06473 238 PVSVLLAGVLlklgtygllRFG-VGLFPEAWVYLAPWL-ATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-192 |
7.03e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.17 E-value: 7.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 55 AATKYFLVQATASALLLFSSMTNAWHTGQ--WDITQLTH---PTSCLLLT-----TAISIKLGLVPFHFWFPEVLQGTSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 224998617 125 TTGLLLA-TALKFPPITLFLLTSPSLNPT------LLALMAIASTALGGWSGLNQTQTRKILAFSSISHLGWMTI 192
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
7.58e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.25 E-value: 7.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 55 AATKYFLVQATASALLLFSSMTNAWHTGQWDITQLTHPT-----SCLLLTTAISIKLGLVPFHFWFPEVLQG-----TSL 124
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPAspsnvSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 125 TTGLLLATALKFPPITLFLLTSPSLNPTLLALMA-IASTALGGWSGLNQTQTRKILAFSSISHLG--------WMTIILV 195
Cdd:PRK08667 243 MSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAgSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 196 YNPKLTLISFLLYC-------LMTTPIFLTLNTI----KTLKLTTMSTAWTKIPPLTATLMLMLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 323 GLDTLALLALGGALfhslnhaLFKSLLFLTAGSVvhatGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260
....*....|....*....|....*....
gi 224998617 265 LIIQELTK--QEMTPIATIIaLLSLLGLF 291
Cdd:PRK08667 403 LLYESFFQsfSVADPLIKIL-LFSVLAIF 430
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
8.86e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 41.35 E-value: 8.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 48 HHPRAIEAATKYFLVQATASALLLFSSMTNAWHTGQWDITQLTHPTSC--------LLLTTAISIKLGLV------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 114 WFPEVLQGTSLTTGLLLATALKFPPITLFLLTSPSLNPT-----LLALMAIASTALGGWSGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 189 WMTIILVYN----PKLTLISFLLYCL----MTTPIFLTLNTI----KTLKLTTMSTAWTKIPPLTATLMLMLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTtyhePGLGVAAATFHLLnhatFKACLFLVAGIVaheaATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 224998617 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-195 |
1.22e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 40.68 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 101 AISIKLGLVPFHFWFPEV-----LQGTSLTTGLLLATA------LKFPpitLFLLTSPSLNPTLLAlMAIASTALGGWSG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLGgyglvrLSWP---ILPLGAQNLAPAVIA-MGIVGIVYGSFAT 314
|
90 100
....*....|....*....|....*.
gi 224998617 170 LNQTQTRKILAFSSISHLGWMTIILV 195
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLV 340
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
6-270 |
2.95e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.39 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 6 KLLSITSLF--LGTTIAISSNHWMM---AWTGLEINTLAILPLISKSHHPraieaATKYFLVQATASALLLFSSMTNAWH 80
Cdd:PRK06459 72 KWLSSLYILtiLGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRP-----AFVFMAFGELSTVLILAGFAWAFII 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHF--WFPE-----------VLQGTSLTTGLLLATAlkfppITLFLLTSP 147
Cdd:PRK06459 147 SGTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIahgnapsnfsaILSATMTLMGVYGILK-----MTILTQTIP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224998617 148 SLNPTLLALMAIASTAL-GGWSGLNQTQTRKILAFSSISHLGWM-----TIILVYNPKLTLISFLLYCLMT--------- 212
Cdd:PRK06459 222 IGYFGLTILAIGAFSILfGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvak 301
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 224998617 213 TPIFLTLNTIKTLKLTTMST---AWTKIppltaTLMLMLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 302 TGLFLSSGLQEKQSITYSKKirnRWIEL-----GLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| |
