|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.96e-155 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 439.64 E-value: 1.96e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 1 MTPLAKLISTMSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAVM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 257786460 321 TNTLIPVLTSLSILLLPLTPLMPTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
1.41e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 369.13 E-value: 1.41e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 1 MTPLAKLISTMSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTtILLITSHSLNPSLLTLMAVM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 257786460 321 TNTL 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
5.20e-125 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 362.32 E-value: 5.20e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 1 MTPLAKLISTMSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAVM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*..
gi 257786460 321 TNTLIPV 327
Cdd:MTH00070 321 TNNLLSL 327
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
2.22e-110 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 325.26 E-value: 2.22e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 1 MTPLAKLISTMSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAVM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPN-KMKQWPPKT 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKWQFENT 320
|
....*..
gi 257786460 320 PTNTLIP 326
Cdd:MTH00105 321 KPMTLLP 327
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
1.68e-93 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 282.24 E-value: 1.68e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 1 MTPLAKLISTMSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAVM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKTP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....*..
gi 257786460 321 TNTLIPV 327
Cdd:MTH00200 321 SNLLVGL 327
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
12-307 |
2.01e-84 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 259.09 E-value: 2.01e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 12 SILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH 91
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 92 PLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAVMSIAFGGWMGLN 171
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 172 QTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 257786460 252 AGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPN 307
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-300 |
1.29e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 195.04 E-value: 1.29e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 1 MTPLAKLISTMSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 TGqwditqLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILlitSHSLNPSLLTLMAVM 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCS 300
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS 292
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-302 |
2.00e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 170.84 E-value: 2.00e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 1 MTPLAKLISTMSILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHS 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 TGQWDITqlthplacLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPT-TILLITSHSLNPSLLTLMAV 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 160 MSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINvLKLPTLMTSWTKTPM 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGD-SGSMKDLGSLKPSYK 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257786460 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-319 |
3.86e-48 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 164.95 E-value: 3.86e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 1 MTPLAKLISTMSILlGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTInahs 80
Cdd:MTH00011 4 TFPTMFLFSSTMTL-GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 tgQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPSLLTLMAVM 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 161 SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 257786460 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQWPPKT 319
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKT 315
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-302 |
1.41e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 152.90 E-value: 1.41e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 12 SILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSStinahSTGQWDItqLTH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG-----SLSFSNL--YLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 92 PLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHslNPSLLTLMAVMSIAFGGWMGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 172 QTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 257786460 252 AGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-298 |
4.28e-31 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 122.15 E-value: 4.28e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 10 TMSILLGTTITITSNHWMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQ 88
Cdd:COG1007 108 LLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAG 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 89 LTHPL------------ACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKL----PPTTILLITSHSLNPS 152
Cdd:COG1007 188 IAAALaagganspllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAD 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 153 ---LLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMII-IITYNPK-LTLLAFYL--YILMTASIFLTMNKINVL 225
Cdd:COG1007 268 wqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLLSRK 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 257786460 226 KLPTLMTS-----WTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:COG1007 348 GGEAEEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
4.98e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 120.52 E-value: 4.98e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLI-SKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 87 --------TQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLitSHSLNPSLLTLMA 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 159 VMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNP----KLTLLAFYLYILMTASIFLTMNKINVLK--LPTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 257786460 233 SWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.06e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 111.84 E-value: 2.06e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 14 LLGTTITITSNHWMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLF--------SSTIN----AHS 80
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTGSLSfagiAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 81 TGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKL----PPTTILLITSHSLNPS---L 153
Cdd:PRK05777 193 LADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 154 LTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWM---IIIITYNPkLTLLAFYL--YILMTASIF---LTMNKINVL 225
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvgLAAGTAEG-YSAVLFYLlaYLFMTLGAFgviSLLRRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786460 226 KlpTLMTSWT----KTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK05777 352 A--ESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-271 |
2.46e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.86 E-value: 2.46e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 23 SNHWMTAWAGLEINTLSILPLI-SKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 91 HPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSL-ITALLLSTMMKLPPttILLITSHSLNPS-------LLTLMAVMSI 162
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGG--YGLIRRSLLYLPsspfiqqILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 163 AFGGWMGLNQTQIRKIMAFSSISHLGWMIIII----TYNPKLTLLAFYLYILMTASIFLTMNKINVLKLPT-----LMTS 233
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirdYGGL 238
|
250 260 270
....*....|....*....|....*....|....*...
gi 257786460 234 WTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELV 271
Cdd:pfam00361 239 AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-297 |
1.12e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 106.96 E-value: 1.12e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH 91
Cdd:TIGR01770 111 ALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 92 PL------------ACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILL-------ITSHSLNPS 152
Cdd:TIGR01770 191 FLsngmlnisllllGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 153 LLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLA--FYL--YILMTASIFLTMNKINVLKLP 228
Cdd:TIGR01770 271 FLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFGVLSLLRSYKDE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786460 229 -----TLMTSWTKT-PMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 351 wieyiSDFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.08e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 102.79 E-value: 3.08e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 88 QLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNpsLLTLMAVMSIAFGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 168 MGLNQTQIRKIMAFSSISHLGWMIIIITYNP----KLTLLAFYLYILMTASIFLTMNKINVLK--LPTLMTSWTKTPMLN 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVIA 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 257786460 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
3.49e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 93.67 E-value: 3.49e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 14 LLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH-- 91
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 92 --------PLACLLLTSAIAIKLGLTPFHFWFPEVL-QGSSLITALLLSTMMKLPP----TTILLITSHSLNPSLLTLMA 158
Cdd:COG0651 197 aeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVyailRVLTLLFGADPALFLGTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 159 VM---SIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFLT----MNKINVLKL 227
Cdd:COG0651 277 VLgllTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiERATGTRDL 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 257786460 228 PTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.52e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 86.45 E-value: 1.52e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 15 LGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAV---------EAATKYFLVQATASALVLFS------------ 73
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 74 --STINAHSTGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLppTTILLITSHSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 152 SLLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI---LMTASIFLTM--------- 219
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALASFTVictleefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 220 -------------NKINVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 257786460 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
4.06e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 76.07 E-value: 4.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTHPL--------ACLLLTSAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenptvvtAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 105 KLGLTPFHFWFPEVLQG-SSLITALLLSTMMKLPPTTILLITSH------SLNPSLLTLMAV---MSIAFGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfRFALGLGWLLAVlalLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 175 IRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFL-------TMNKINVLKLPTLMTswtKTPMLNTT 243
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLaagaievTYGTRRLSELSGLGR---RMPLTAAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 257786460 244 LMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
4.19e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 63.87 E-value: 4.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 51 RAVEAATKYFLVQATASALVLFS-STINAHSTGQWDI---------TQLTHPLACLL----LTSAIAIKLGLTPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 117 EVLQGS-----------SLITALLLSTMMklppTTILLITSHSLNPSLLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSIS 185
Cdd:CHL00049 239 DVYEGSptpvvaflsvtSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 186 HLGWMII-IITYNPK------LTLLAFYlyILMT----ASIFLTMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGL 254
Cdd:CHL00049 315 QIGYVIIgIIVGDSNdgyasmITYMLFY--IFMNlgtfACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGI 392
|
....*....
gi 257786460 255 PPLTGFLPK 263
Cdd:CHL00049 393 PPLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-192 |
1.16e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.41 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 49 HPRAVEAATKYFLVQATASALVLFSSTINAHSTGQW--DITQLTH--------PLACLLLTSAIAIKLGLTPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplpltaqLLLFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 119 L-QGSSLITALLLSTMMK----------LPpttILLITSHSLNPSLLTLmAVMSIAFGGWMGLNQTQIRKIMAFSSISHL 187
Cdd:COG1008 236 HvEAPTAGSVLLAGVLLKmggygllrfaLP---LFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
....*
gi 257786460 188 GWMII 192
Cdd:COG1008 312 GFVLL 316
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.77e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.04 E-value: 1.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 33 LEINTLSILPLIS-KSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTHPL----------ACLLLTSA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMsenptvvakiALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 102 IAIKLGLTPFHFWFPEVL-QGSSLITALLLST-------MMKLPPTTILLITSHSLNPSLLTLMAVMSIAFGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYpAAPSSISAMLLVIkqaglyaLARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 174 QIRKIMAFSSISHLGWMII-----IITYNPklTLLAFYLYILMTASIFLTMNKInVLKLPTLMTSWT------------- 235
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNHA-LYKALLFLTAGAviyetgtrnlnel 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 257786460 236 -----KTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 gglarTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
5.21e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 60.45 E-value: 5.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 50 PRAVEAATKYFLVQATASALVLF-SSTINAHSTGQwdiTQLTH-------------PLACLLLTSAIAIKLGLTPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialalitspslglALALVFVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 116 PEVLQGSSLITALLLSTMMKLPPTTI---LLITSHSLNPS----LLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 189 WMIIIITYNPKLTLLAFYLYILmtasIFLTMN--KINVLKLPTLMTS----------WTKTPMLNTTLMLTLLSLAGLPP 256
Cdd:PRK02504 314 FVMIGLVAGTEAGYASMVFYLL----AYLFMNlgAFACVILFSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPP 389
|
....*..
gi 257786460 257 LTGFLPK 263
Cdd:PRK02504 390 LAGFFGK 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
1.14e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.18 E-value: 1.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 50 PRAVEAATKYFLVQATASALVLFS----STINAHSTGQWDITQLTHPLAC-----LLLTSAIAIKLGLTPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAilglYFLGGGTFDLLELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 120 QGSSLITALLLSTMMKLPPTTILLI-------TSHSLNPSLLTLmAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMII 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAPVLAAL-GVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 193 -IITYNPKLTLLAFYLYI---LMTASIFL----TMNKINVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 gIFSFNELGISGAVFQMIshgLITAALFLlvgvLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 257786460 265 LIIQELVKqemtaTTTIISMLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
23-298 |
3.54e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.08 E-value: 3.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 23 SNHWMTAWAGLEINTLSILPLISKSHHpRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDIT-------QLTHP--- 92
Cdd:PRK08668 117 ANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTgfa 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 93 -LACLLLTSAIAIKLGLTPFHFWFPE-----------VLQG--SSLITALLLSTMMKLPPTTILL----ITSHSLNPSLL 154
Cdd:PRK08668 196 lIVFLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYVLPGTKLFSefgtYRGVPLFNYIL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 155 TLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTL-----------LAFYLYILMTASIFLTMNKIN 223
Cdd:PRK08668 276 AWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFagglfhvfnhaLFKGLFFLIFAAVIYRTGTTK 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786460 224 VLKLPTLMtswTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:PRK08668 356 ISEMGGLI---EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
9.13e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.67 E-value: 9.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQW---DITQLTHPL--------ACLLLTSA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLnmgDMFLIIQDLptnraiqiGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 102 IAIKLGLTPFHFWFPEVLQGS-SLITALLLSTMMKLPPTTI-----------LLITSHSLNPSLLTLmAVMSIAFGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKVMIYLIirivydvfkanFVFTTLPFNNVFMIL-AALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 170 LNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFLTMNKI----NVLKLPTLMTSWTKTPMLN 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 257786460 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
3.85e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 54.76 E-value: 3.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATA------SALVLFSSTINAHSTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 87 TQLTHP----------LACLLLTSAIAIKLGLTPFHFWFPEV-LQGSSLITALLLSTMMKLPPTTILLITS-------HS 148
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786460 149 LNPSLLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYIL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
5.03e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 54.44 E-value: 5.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 50 PRAVEAATKYFLVQATASALVLFS----STINAHSTGQWDITQLTHP-----------LACLLltsAIAIKLGLTPFHFW 114
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLplppgvqywlfLAFFI---AFAVKMPMFPLHTW 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 115 FPEVLQ-----GSSLITALLLST----MMK--LPpttILLITSHSLNPSLLTLmAVMSIAFGGWMGLNQTQIRKIMAFSS 183
Cdd:PRK05846 234 LPDAHVqaptaGSVLLAGILLKMgaygLLRfsLP---LFPDASHEFAPIIITL-GVIAIIYGALVALAQTDIKKLIAYSS 309
|
170
....*....|.
gi 257786460 184 ISHLGWMIIII 194
Cdd:PRK05846 310 ISHMGFVTLGI 320
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
1.51e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.00 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 110 PFHFWFPEVLQGSSLITALLLS-TMMKLpptTILLITShsLNPSL---------LTLMAVMSIAFGGWMGLNQTQIRKIM 179
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSaTMVKA---GIYLLAR--LNPVLggtplwqtiLPLFGGLTMLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 180 AFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFLTMNKIN-------VLKLPTLmtsWTKTPMLNTTLMLTL 248
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIIDhetgtrdITKLGGL---RRAMPITAAAALLAA 364
|
170
....*....|....*...
gi 257786460 249 LSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 365 LSMAGLPPLFGFLAKELI 382
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
2.09e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.46 E-value: 2.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 48 HHPRAVEAATKYFLVQAT------ASALVLFS-------STINAHstGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFW 114
Cdd:COG1009 156 EKPSARRAARKAFLVTRVgdlgllLGILLLGAiagtlnfSELLAA--APTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 115 FPEVLQG----SSLITAlllSTMMKlppTTI-LLITSH---SLNPSLLTLMAVMSIA---FGGWMGLNQTQIRKIMAFSS 183
Cdd:COG1009 234 LPDAMEGptpvSALLHA---ATMVK---AGVyLLARLSplfALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYST 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 184 ISHLGWMII-------------IITYnpkltllAFY--LYILMTASIFLTMNKINVLKLPTLmtsWTKTPMLNTTLMLTL 248
Cdd:COG1009 308 VSQLGYMFLalgvgayvaalfhLLTH-------AFFkaLLFLGAGSVIHATGTRDIRKMGGL---RKKMPITAITFLIGA 377
|
250 260
....*....|....*....|...
gi 257786460 249 LSLAGLPPLTGFLPKWLIIQELV 271
Cdd:COG1009 378 LSLAGIPPFAGFFSKEAILEAAL 400
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
8.26e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.42 E-value: 8.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTHPL-----------ACLLLTSAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnptspviygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 103 AIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLIT-----SHSLNPSLLTLMAVMSIA---FGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLIALSVLamvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 175 IRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLY----ILMTASIFLTMNKINVLK----LPTLMTSWTKTPMLNTTLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHainhVIYKSALFLGAGIVSYRTktsnLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786460 247 TLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
3.32e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.80 E-value: 3.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 92 PLACLLLTSAI--AIKLGLtpfHFWFPEVLQGSSLITALLLSTMMkLPPTTILLITSHSLNPS------LLTLMAVMSIA 163
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLMIRSFPLFEKapltllIITIFGALTAF 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 164 FGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYL--YILMTASIFL---------TMNKINVLKLPTLMT 232
Cdd:MTH00032 302 FAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLsagsvihstTVDEQDMRKMGGLIH 381
|
170 180 190
....*....|....*....|....*....|....*.
gi 257786460 233 SwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 382 S---IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-211 |
3.85e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 48.39 E-value: 3.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 20 TITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSsTI----NAHstgqwdiTQLTHPLAC 95
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFG-TIlvyaNAA-------TVMGDGEMA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 96 LLLTSAIAI----------------------KLGLTPFHFWFPE-----------VLQGSSLITALLLSTMMKLppttIL 142
Cdd:PRK06458 196 ILWTELLKHaslldptlmklafvflligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYYI----LI 271
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 143 LITSHSLNPS-LLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYILM 211
Cdd:PRK06458 272 DAAIGSDFPGrLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLN 341
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
6.82e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.72 E-value: 6.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 55 AATKYFLVQATASALVLFSSTINAHSTGQ--WDITQLTH---PLACLLLTS-----AIAIKLGLTPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLYagfliAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257786460 124 LITALLLSTMMKLPPTTI------LLITSHSLNPSLLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
72-305 |
8.69e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 47.38 E-value: 8.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 72 FSSTINAHSTGqwDITQLThpLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNP 151
Cdd:MTH00020 194 FSSVFNMVVSA--PSSDIT--LICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQ 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 152 SLLTLMAV-----MSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIItynpKLTLLAFYLYILMT-----ASIFLTMNK 221
Cdd:MTH00020 270 APLALIIVtivgsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNhaffkALLFLSAGS 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 222 I--------NVLKLPTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLS-LLGLFF 292
Cdd:MTH00020 346 VihalsdeqDMRKMGGLISF---LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFY 422
|
250
....*....|...
gi 257786460 293 YLRLAYCSTITLP 305
Cdd:MTH00020 423 SIRLIYLTFLSNT 435
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-192 |
1.58e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 46.62 E-value: 1.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 10 TMSILLGTTITITSNHW---MTAWA--GLEINTLsilpLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQW 84
Cdd:PRK08168 106 LAGVLAAVHLLVLSDHLlvlIAAWAaiSLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 85 DITQL---------THPL--ACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTM-----MKLPPTTILLITSHS 148
Cdd:PRK08168 182 SLSALwahlaaqgaSPSLqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggFVLIRFAPLLEQAPP 261
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 257786460 149 LNpSLLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMII 192
Cdd:PRK08168 262 AR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
1.75e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.23 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 55 AATKYFLVQATASALVL--FSSTINAHSTGQWDITQL---THPLAC-LLLTSAI----AIKLGLTPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILvsFLGLVWLSGASSFDYEPLrshTLPLSTqLLLLAPIlvgfGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 124 LITALLLSTMMKLPPTTIL-------LITSHSLNPSLLTLmAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITY 196
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglfPEAWVYLAPWLATW-AVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 197 NPKLTLLAFYLYI----LMTASIFLTMNKI-------NVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK06473 317 ATPLSILAAVFQMishgLISALLFLLVGVVykktgsrDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFL 396
|
.
gi 257786460 266 I 266
Cdd:PRK06473 397 V 397
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-263 |
1.90e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 46.46 E-value: 1.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 79 HSTGQWDITQL-THPLACLLLTSAIAI-------KLGLTPFHFWFPEVLQGSSLITALLLST-MMKlppTTILLI----- 144
Cdd:PRK12644 182 QAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAaMVK---AGIYLVarlap 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 145 ---TSHSLNPSLLTLmAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLA----FYLYILMTASIFL 217
Cdd:PRK12644 259 gfaDVPVWRPTVLVL-GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAglamLLAHALFKAALFL 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 257786460 218 TMNKIN-------VLKLPTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 338 VVGIIDhstgtrdIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
79-263 |
5.47e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.03 E-value: 5.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 79 HSTGQWDITQLTHPLACLLLTSAIAiKLGLTPFHFWFPEVLQGSSLITALL---------------LSTMMKLPPT-TIL 142
Cdd:PRK12650 196 HSDVWAEKPGLTTVVAVLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLhaaavvkagiylllrFSPVFHDVAVwNWL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 143 LITShslnpSLLTlmAVMSIAFGgwmgLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYI----LMTASIFLT 218
Cdd:PRK12650 275 LIIV-----GMIT--ALMGAVFA----VQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFML 343
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 257786460 219 MNKIN----VLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 344 IGVVDhqagTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
5.64e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.82 E-value: 5.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 48 HHPRAVEAATKYFLVQAtASALVLFSSTINAHS-TGQWDITQL-----------THPL---ACLLLTSAIAIKLGLTPFH 112
Cdd:PRK12649 156 HRPESVYGATKSLLITA-GGGLFMFAGFLLLHViTGTYDIATIlqdselienikGHPLfliTLILIFIGAAAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 113 FWFPEVLQGSSLITALLLSTMMkLPPTTILLITSH---SLNPSLLTLMA---VMSIAFGGWMGLNQTQIRKIMAFSSISH 186
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHpifSGTEAWFILVSgtgMITMVLAGFLAFRQTDIKAILAYSTISQ 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 187 LGWMIIIITYN----PKLTLLAFYLYIL----MTASIFLTMNKI-------NVLKLPTLMTswtKTPMLNTTLMLTLLSL 251
Cdd:PRK12649 314 LAYLMTMYGYTtyhePGLGVAAATFHLLnhatFKACLFLVAGIVaheaatrDIRKLGGLRK---EMPITFIVASIAALAM 390
|
250
....*....|..
gi 257786460 252 AGLPPLTGFLPK 263
Cdd:PRK12649 391 AGIPPLNGFLSK 402
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
34-315 |
7.64e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.17 E-value: 7.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFS--------STIN-AHSTGQWDITQLTHPLACL--LLTSAI 102
Cdd:PRK12663 138 EVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGigllygtfGTLNmAHIAMRLNDMGDTATLTTIalLFLLAF 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 103 AIKLGLTPFhFWFPEVLQGSSLITALLLSTMMK-------LPPTTILLITSHSLNPSLLTLMAVMSIAFGGWMGLNQTQI 175
Cdd:PRK12663 218 GMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 176 RKIMAFSSISHLGWMIIIITYNPKLTLLA--FYLY---ILMTAsIFLTMNKINVL----KLPTLMTSWTKTPMLNTTLML 246
Cdd:PRK12663 297 RRIAGYQVISSIGFILLGLALGTPAGINGaiFYLVhdmVVKTA-LFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLI 375
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257786460 247 TLLSLAGLPPLTGFLPKWLIIQELVKQE---MTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPPNKMKQW 315
Cdd:PRK12663 376 LIFAIGGLPPFSGFWGKVLLVQGALDNGayiLLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLY 447
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
34-291 |
8.33e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 44.34 E-value: 8.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 34 EINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAH-STGQWDITQLTHP-----LACLLLTSAIAIKLG 107
Cdd:PRK08667 141 EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASagilsLVFLLLFLGFGIKAG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 108 LTPFHFWFPEVLQGS-SLITALLLSTMMKLPPTTILLITSHSLNPSL-----LTLMAVMSIAFGGWMGLNQTQIRKIMAF 181
Cdd:PRK08667 221 IIPFHKWLPYAHPASpSNVSALMSGVMLKVAVYGLVRFLMDVLSPELwwgvlILLAGSISALLGVIYALKEHDLKGLLAY 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 182 SSISHLG--------WMIIIITYNPKLTLLA-------------FYLYILMTA-SIFLTMNKINVLKLPTLMTSwtkTPM 239
Cdd:PRK08667 301 SSIENIGiilmgiglYVIFGVYGLDTLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPY 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 257786460 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTI-ISMLSLLGLF 291
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
8.34e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 44.17 E-value: 8.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH--PLACLLLTSAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 111 FHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPS--LLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 189 WMIIiityNPKLTLLAFYLYILMTASIFLTMNKINVLKLptlmTSWTKTPMLN---TTLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07234 283 FILA----APLVGGLYALAHGLVKSTLFLCAGALPSRNF----TELISQMLGIgkwIPLTMASFSIAGFPLLAGFVSKVL 354
|
....*.
gi 257786460 266 IIQELV 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-268 |
1.14e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 43.80 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 50 PRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL----------THPLACLLLTSAIAIKLGLTPFHFWFPEVL 119
Cdd:PRK12665 157 AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldelpsgTRTALFAVLLVAFGIKAAVFPLSFWLPDSY 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 120 -QGSSLITALLLSTMMK-----LPPTTILLITSHSLNpSLLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIII 193
Cdd:PRK12665 237 pTAPAPVTAVFAGLLTKvgvyaIIRTHTLLFPGGGLD-TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFG 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 194 ITYNPKLTLLAFYLY----ILMTASIFLTMNKI-------NVLKLPTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLP 262
Cdd:PRK12665 316 IALSTVAGLSGAIYYvahhITVQTTLFLVVGLIerqagssSLRRLGGLAKA---SPLLAVLFFVPALNLGGIPPFSGFIG 392
|
....*.
gi 257786460 263 KWLIIQ 268
Cdd:PRK12665 393 KVALLE 398
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-270 |
2.69e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.86 E-value: 2.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 7 LISTMSI-LLGTTITITSNHWMTAWAGLEINTLS---ILPLISKSHHPRAVEAATKYFlvqatASALVLFSSTINAHSTG 82
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFVFMAFGEL-----STVLILAGFAWAFIISG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 83 QWDITQLTHPLACLLLTSAIAIKLGLTPFHF--WFPEVL-QGSSLITALLLSTMMKLPPTTILLITSHSLNPS------L 153
Cdd:PRK06459 149 TTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHgNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigyfglT 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 154 LTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMII-----IITYNPKLTLLAFYLYILMTASIFLTMNKINVLKLP 228
Cdd:PRK06459 229 ILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSS 308
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 257786460 229 TLMTSWTKT-------PMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 309 GLQEKQSITyskkirnRWIELGLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-289 |
4.79e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 41.73 E-value: 4.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 11 MSILLGTTITITSNhWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVqATASALVLF--SSTINAHSTGQWD--- 85
Cdd:PRK06589 124 LTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKI-LMISALLLFlpAVILIYTKTGNLDfvs 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 86 --ITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMM----KLPPTTILLITSHSLNP-------S 152
Cdd:PRK06589 202 ggLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLqrifaefN 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 153 LLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYIL----MTASIFLTMNKINVLK-- 226
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVshsfAKICLFYSMGSIYSLKke 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257786460 227 --LPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTaTTTIISMLSLLG 289
Cdd:PRK06589 362 dqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQP-WLSIIVMLVVIA 425
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
80-213 |
7.35e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.48 E-value: 7.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 80 STGQWDITQLTH-------PLACLLLtsAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPS 152
Cdd:MTH00211 187 NLNSWEISQLFIlnldltlFLLGLLL--AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNN 264
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 257786460 153 LLTLMAVMSIA-----FGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKltLLAFyLYILMTA 213
Cdd:MTH00211 265 QLILGAVLLLGaltmlFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP--QLAF-LHICTHA 327
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
9.04e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.85 E-value: 9.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 55 AATKYFLVQATASALVLF----------SSTINAHSTGQWDITQLTHPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAaflgivwlsgSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 125 ITALLLSTMMKLPPTTILLITSHSLNPSLLTLMA-------VMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVApglaiigTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 198 PKLTLLAFYLYI----LMTASIFLTMNKI-------NVLKLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07363 318 TQLSLLGAVAQMishgLILALLFHLVGIVerkvgtrDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 257786460 267 IQ 268
Cdd:PRK07363 398 FQ 399
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.04e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.97 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 107 GLTPFHFWFPEVLQGSSLITALLLSTM-MKLPPTTILLITSHSLNPSL----LTLMAVMSIAF-GGWMGLNQTQIRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvALLVLGMITAFvGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 181 FSSISHLGWMII--------IITYNPKLTLLAFY--LYILMTASIFLTM---------NKINVLKLPTLMTSWTKTPMLN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 257786460 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELVK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-219 |
1.08e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 40.68 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 101 AIAIKLGLTPFHFWFPEV-----LQGSSLITALLLST----MMKLpPTTILLITSHSLNPSLLTlMAVMSIAFGGWMGLN 171
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLggygLVRL-SWPILPLGAQNLAPAVIA-MGIVGIVYGSFATCR 316
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 257786460 172 QTQIRKIMAFSSISHLGWM-IIIITYNpkltllafylYILMTASIFLTM 219
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMGLVsITLVTHD----------IIGLTGSIFIML 355
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-296 |
1.70e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 40.14 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 13 ILLGTTITITSNHWMTAWAGLEINTLSILPLISKSHHPRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQLTH- 91
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 92 ---------PLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSL-ITALLLSTMMK---LPPTTILLITSHSLNPS----LL 154
Cdd:PRK08377 197 agtidptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKaglYAMARILYLMQNANGWSsvlkLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 155 TLMAVMSIAFGGWMGLNQTQIRKIMAFSSISHLGWMIIIITYNPKLTLLAFYLYIL----MTASIFLTMNKINVLKLPTL 230
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMInhaiVKALLFLAVGYVGITLGGTE 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 231 MTSWT----KTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK08377 357 IEKFEglgkRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
2.27e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 39.57 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 33 LEINTLSILPLISKSHHPRAVEAATKYFLVQATAS------ALVLFSSTINAHSTGQWDITQLTHPLACLLLTSAIAIKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 107 GLTPFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPS------LLTLMAVMSIAFGGWMGLNQTQIRKIMA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphvigyVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 181 FSSISHLGWMIIIITY---NPKLTLLAFYLYILMTASI----FLTMNKIN----VLKLPTLMTSWTKTPMLNTTLMLTLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLSLailGSRLALEGSIAYIFNHAFAkslfFLVAGALSyscgTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250
....*....|....*...
gi 257786460 250 SLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF 399
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
101-194 |
3.31e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 39.16 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 101 AIAIKLGLTPFHFWFP----EVLQGSSLITALLLSTMMKLPPTTI---LLITSHSLNPSLLTLMAVMSIAFGGWMGLNQT 173
Cdd:CHL00011 220 AYAVKLPIIPLHTWLPdthgEAHYSTCMLLAGILLKMGAYGLIRInmeLLPHAHSIFSPWLVIVGAIQIIYAASTSLGQR 299
|
90 100
....*....|....*....|.
gi 257786460 174 QIRKIMAFSSISHLGWMIIII 194
Cdd:CHL00011 300 NLKKRIAYSSVSHMGFIIIGI 320
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-191 |
4.18e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 39.11 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 50 PRAVEAATKYFLVQATASALVLFSSTINAHSTGQWDITQL--THPLACLLLTSAIAIKLGLTPFHFWFPEVLQGSSLITA 127
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIagLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGS 218
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257786460 128 LLLS---------TMMKLPPTTILLITshslnpsLLTLMAVmsiaFGGWMGLNQTQIRKIMAFSSISHLGWMI 191
Cdd:PRK12668 219 VFLSafttktavyALARAFPGTELLIY-------IGAAMAV----YGVFFALLENDLRRLLSYHIVSQVGYMV 280
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-220 |
5.26e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.58 E-value: 5.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 110 PFHFWFPEVLQGSSLITALLLSTMMKLPPTTILLITSHSLNPS-----LLTLMAVMSIAFGGWMGLNQTQIRKIMAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 257786460 185 SHLGWMIIII------TYNPKLTLLAFYLYILMtASIFLTMN 220
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMN 348
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
152-300 |
5.64e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.47 E-value: 5.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257786460 152 SLLTLMAVMSiafggwmGLNQTQIRKIMAFSSISHLGWMIIIITYN-PKLTLLAFYLYILMTASIFLTMNKI-----NVL 225
Cdd:MTH00209 247 SLTTLMASMS-------ANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAGNIihshgHSQ 319
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 257786460 226 KLPTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTATTTIISMLSL-LGLFFYLRLAYCS 300
Cdd:MTH00209 320 DIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| |
