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Conserved domains on  [gi|291336540|gb|ADD96090|]
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H translocating transhydrogenase subunit beta [uncultured organism MedDCM-OCT-S04-C478]

Protein Classification

NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta( domain architecture ID 10003429)

NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta is part of a tetrameric membrane-bound proton pump (composed of two alpha and two beta subunits) that catalyzes the reversible transfer of a hydride ion equivalent between NAD and NADP

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-440 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


:

Pssm-ID: 440893  Cd Length: 458  Bit Score: 528.11  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540   1 MIEIILLVSSILFIFALKLFGRPSTAHRANTFAMLAMALAVFSAFnfdFSKYDSAF---YITIVVSGLLGVLISKRVQMT 77
Cdd:COG1282    5 LITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATL---LLPGIVNYgliLAAIAIGGAIGAVLARKVEMT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  78 QMPELVGLFNGFGGGASGAIAYVEL-----SGSSLPISDVFVAIFSMVIGIFTFSGSLVAVMKLRGKLN----NFSKKLA 148
Cdd:COG1282   82 AMPQLVALFNGFGGLAAALVAAAELlepgaLAGALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISgkpiTFPGQHL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 149 DIFSVFLPTIIVIPAVLEMDDLLIEFIILVAI--IAGVIRVAVIGGADMPVVIAFLNSLSGIAAMSAGFIVNSIILIVAG 226
Cdd:COG1282  162 LNLLLLLAIVALGVLFVVSPGSLLLLLLLTVLalLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGNDLLIIAG 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 227 ALVGASGIILTLLMCAAMNRTLLDVLKGGFGG---TAINNEYEKDPISTSPEDVAIQLSYAESVVIVPGYGMAVAQAQAA 303
Cdd:COG1282  242 ALVGASGAILTYIMCKAMNRSLINVLFGGFGGggaAAAGAAEQGEVKEISAEDAAILLAYASSVIIVPGYGMAVAQAQHA 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 304 VKELTNTLKDKNIEVKFAIHPVAGRMPGHMNVLLAEVDIDYEDMFILEDINSEFSSTDVVIVLGANDVVNPLARTDEDSP 383
Cdd:COG1282  322 VRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPAARTDPGSP 401

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 291336540 384 IYGMPILDVDLSKQVIVIKRSMSPGYAGIANPLFVNDNTKMLFADAKEGLENIIKSF 440
Cdd:COG1282  402 IYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
 
Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-440 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


Pssm-ID: 440893  Cd Length: 458  Bit Score: 528.11  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540   1 MIEIILLVSSILFIFALKLFGRPSTAHRANTFAMLAMALAVFSAFnfdFSKYDSAF---YITIVVSGLLGVLISKRVQMT 77
Cdd:COG1282    5 LITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATL---LLPGIVNYgliLAAIAIGGAIGAVLARKVEMT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  78 QMPELVGLFNGFGGGASGAIAYVEL-----SGSSLPISDVFVAIFSMVIGIFTFSGSLVAVMKLRGKLN----NFSKKLA 148
Cdd:COG1282   82 AMPQLVALFNGFGGLAAALVAAAELlepgaLAGALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISgkpiTFPGQHL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 149 DIFSVFLPTIIVIPAVLEMDDLLIEFIILVAI--IAGVIRVAVIGGADMPVVIAFLNSLSGIAAMSAGFIVNSIILIVAG 226
Cdd:COG1282  162 LNLLLLLAIVALGVLFVVSPGSLLLLLLLTVLalLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGNDLLIIAG 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 227 ALVGASGIILTLLMCAAMNRTLLDVLKGGFGG---TAINNEYEKDPISTSPEDVAIQLSYAESVVIVPGYGMAVAQAQAA 303
Cdd:COG1282  242 ALVGASGAILTYIMCKAMNRSLINVLFGGFGGggaAAAGAAEQGEVKEISAEDAAILLAYASSVIIVPGYGMAVAQAQHA 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 304 VKELTNTLKDKNIEVKFAIHPVAGRMPGHMNVLLAEVDIDYEDMFILEDINSEFSSTDVVIVLGANDVVNPLARTDEDSP 383
Cdd:COG1282  322 VRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPAARTDPGSP 401

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 291336540 384 IYGMPILDVDLSKQVIVIKRSMSPGYAGIANPLFVNDNTKMLFADAKEGLENIIKSF 440
Cdd:COG1282  402 IYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
PNTB pfam02233
NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP ...
 7-439 0e+00

NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.


Pssm-ID: 460502  Cd Length: 454  Bit Score: 512.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540    7 LVSSILFIFALKLFGRPSTAHRANTFAMLAMALAVFSAFNFDFSKYDSAF---YITIVVSGLLGVLISKRVQMTQMPELV 83
Cdd:pfam02233   4 LVAAVLFILGLKGLSSPKTARRGNLLGAIGMALAIVATLLLGALADSLPYgliLIAIAIGGVIGLYIARRVKMTAMPQLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540   84 GLFNGFGGGASGAIAYVE-LSGSSLPISDVFVAIFSMVIGIF----TFSGSLVAVMKLRGKLNNFSKKLAD---IFSVFL 155
Cdd:pfam02233  84 ALFHSLGGLAAVLVAIAEyLAPEAFGAGISAFHLVEIVLGVLigavTFTGSLIAFGKLQGLLSSKPLTLPGrhlLNLLLL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  156 PTIIVIPAVLEMDDLLIEFIILVAI--IAGVIRVAVIGGADMPVVIAFLNSLSGIAAMSAGFIVNSIILIVAGALVGASG 233
Cdd:pfam02233 164 LAIVVLGVLFVAAPSSPGLWLLTALalLLGVLLVLPIGGADMPVVISLLNSYSGWAAAAAGFVLGNPLLIIAGALVGASG 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  234 IILTLLMCAAMNRTLLDVLKGGFGGTA----INNEYEKDPI-STSPEDVAIQLSYAESVVIVPGYGMAVAQAQAAVKELT 308
Cdd:pfam02233 244 AILTYIMCKAMNRSLTNVLFGGFGAAAsagaAGAAAADGEVkEISAEDAAELLAYASSVIIVPGYGMAVAQAQHAVAELA 323

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  309 NTLKDKNIEVKFAIHPVAGRMPGHMNVLLAEVDIDYEDMFILEDINSEFSSTDVVIVLGANDVVNPLARTDEDSPIYGMP 388
Cdd:pfam02233 324 DLLEERGVEVRFAIHPVAGRMPGHMNVLLAEADVPYDIVLEMDEINDDFADTDVALVIGANDVVNPAARTDPGSPIYGMP 403

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|.
gi 291336540  389 ILDVDLSKQVIVIKRSMSPGYAGIANPLFVNDNTKMLFADAKEGLENIIKS 439
Cdd:pfam02233 404 ILEVWKAKTVIVIKRSMGPGYAGVDNPLFYKDNTRMLFGDAKKSLEELVKA 454
pntB PRK09444
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;
7-438 7.05e-127

Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;


Pssm-ID: 236520  Cd Length: 462  Bit Score: 375.21  E-value: 7.05e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540   7 LVSSILFIFALKLFGRPSTAHRANTFAMLAMALAVFSA-FNFDFSkydSAFYITI--VVSGLLGVLISKRVQMTQMPELV 83
Cdd:PRK09444  11 IVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATiFGPDTG---NVGWIIIamVIGGAIGIRLAKKVEMTEMPELV 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  84 GLFNGFGGGAS---GAIAYVELSGSSLPI------SDVFVAIFsmvIGIFTFSGSLVAVMKLRGKLNnfSKKL------- 147
Cdd:PRK09444  88 AILHSFVGLAAvlvGFNSYLDHDAGMAPVlvnihlTEVFLGIF---IGAVTFTGSIVAFGKLRGKIS--SKPLmlphrhk 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 148 ----ADIFSVFLPTIIVIPAVLEMDDLLIEFIILVAIIAGVIRVAVIGGADMPVVIAFLNSLSGIAAMSAGFIVNSIILI 223
Cdd:PRK09444 163 lnlaALVVSFLLLIVFVRTDSVGLQVFALLLMTLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLI 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 224 VAGALVGASGIILTLLMCAAMNRTLLDVLKGGFG--GTAINNEYEK-DPISTSPEDVAIQLSYAESVVIVPGYGMAVAQA 300
Cdd:PRK09444 243 VTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGtdGSSTGDDEEVgEHRETTAEEVAEMLKNSHSVIITPGYGMAVAQA 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 301 QAAVKELTNTLKDKNIEVKFAIHPVAGRMPGHMNVLLAEVDIDYEDMFILEDINSEFSSTDVVIVLGANDVVNPLARTDE 380
Cdd:PRK09444 323 QYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQEDP 402

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 291336540 381 DSPIYGMPILDVDLSKQVIVIKRSMSPGYAGIANPLFVNDNTKMLFADAKEGLENIIK 438
Cdd:PRK09444 403 NSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVDAILK 460
 
Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-440 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


Pssm-ID: 440893  Cd Length: 458  Bit Score: 528.11  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540   1 MIEIILLVSSILFIFALKLFGRPSTAHRANTFAMLAMALAVFSAFnfdFSKYDSAF---YITIVVSGLLGVLISKRVQMT 77
Cdd:COG1282    5 LITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATL---LLPGIVNYgliLAAIAIGGAIGAVLARKVEMT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  78 QMPELVGLFNGFGGGASGAIAYVEL-----SGSSLPISDVFVAIFSMVIGIFTFSGSLVAVMKLRGKLN----NFSKKLA 148
Cdd:COG1282   82 AMPQLVALFNGFGGLAAALVAAAELlepgaLAGALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISgkpiTFPGQHL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 149 DIFSVFLPTIIVIPAVLEMDDLLIEFIILVAI--IAGVIRVAVIGGADMPVVIAFLNSLSGIAAMSAGFIVNSIILIVAG 226
Cdd:COG1282  162 LNLLLLLAIVALGVLFVVSPGSLLLLLLLTVLalLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGNDLLIIAG 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 227 ALVGASGIILTLLMCAAMNRTLLDVLKGGFGG---TAINNEYEKDPISTSPEDVAIQLSYAESVVIVPGYGMAVAQAQAA 303
Cdd:COG1282  242 ALVGASGAILTYIMCKAMNRSLINVLFGGFGGggaAAAGAAEQGEVKEISAEDAAILLAYASSVIIVPGYGMAVAQAQHA 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 304 VKELTNTLKDKNIEVKFAIHPVAGRMPGHMNVLLAEVDIDYEDMFILEDINSEFSSTDVVIVLGANDVVNPLARTDEDSP 383
Cdd:COG1282  322 VRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPAARTDPGSP 401

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 291336540 384 IYGMPILDVDLSKQVIVIKRSMSPGYAGIANPLFVNDNTKMLFADAKEGLENIIKSF 440
Cdd:COG1282  402 IYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
PNTB pfam02233
NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP ...
 7-439 0e+00

NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.


Pssm-ID: 460502  Cd Length: 454  Bit Score: 512.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540    7 LVSSILFIFALKLFGRPSTAHRANTFAMLAMALAVFSAFNFDFSKYDSAF---YITIVVSGLLGVLISKRVQMTQMPELV 83
Cdd:pfam02233   4 LVAAVLFILGLKGLSSPKTARRGNLLGAIGMALAIVATLLLGALADSLPYgliLIAIAIGGVIGLYIARRVKMTAMPQLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540   84 GLFNGFGGGASGAIAYVE-LSGSSLPISDVFVAIFSMVIGIF----TFSGSLVAVMKLRGKLNNFSKKLAD---IFSVFL 155
Cdd:pfam02233  84 ALFHSLGGLAAVLVAIAEyLAPEAFGAGISAFHLVEIVLGVLigavTFTGSLIAFGKLQGLLSSKPLTLPGrhlLNLLLL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  156 PTIIVIPAVLEMDDLLIEFIILVAI--IAGVIRVAVIGGADMPVVIAFLNSLSGIAAMSAGFIVNSIILIVAGALVGASG 233
Cdd:pfam02233 164 LAIVVLGVLFVAAPSSPGLWLLTALalLLGVLLVLPIGGADMPVVISLLNSYSGWAAAAAGFVLGNPLLIIAGALVGASG 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  234 IILTLLMCAAMNRTLLDVLKGGFGGTA----INNEYEKDPI-STSPEDVAIQLSYAESVVIVPGYGMAVAQAQAAVKELT 308
Cdd:pfam02233 244 AILTYIMCKAMNRSLTNVLFGGFGAAAsagaAGAAAADGEVkEISAEDAAELLAYASSVIIVPGYGMAVAQAQHAVAELA 323

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  309 NTLKDKNIEVKFAIHPVAGRMPGHMNVLLAEVDIDYEDMFILEDINSEFSSTDVVIVLGANDVVNPLARTDEDSPIYGMP 388
Cdd:pfam02233 324 DLLEERGVEVRFAIHPVAGRMPGHMNVLLAEADVPYDIVLEMDEINDDFADTDVALVIGANDVVNPAARTDPGSPIYGMP 403

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|.
gi 291336540  389 ILDVDLSKQVIVIKRSMSPGYAGIANPLFVNDNTKMLFADAKEGLENIIKS 439
Cdd:pfam02233 404 ILEVWKAKTVIVIKRSMGPGYAGVDNPLFYKDNTRMLFGDAKKSLEELVKA 454
pntB PRK09444
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;
7-438 7.05e-127

Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;


Pssm-ID: 236520  Cd Length: 462  Bit Score: 375.21  E-value: 7.05e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540   7 LVSSILFIFALKLFGRPSTAHRANTFAMLAMALAVFSA-FNFDFSkydSAFYITI--VVSGLLGVLISKRVQMTQMPELV 83
Cdd:PRK09444  11 IVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATiFGPDTG---NVGWIIIamVIGGAIGIRLAKKVEMTEMPELV 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540  84 GLFNGFGGGAS---GAIAYVELSGSSLPI------SDVFVAIFsmvIGIFTFSGSLVAVMKLRGKLNnfSKKL------- 147
Cdd:PRK09444  88 AILHSFVGLAAvlvGFNSYLDHDAGMAPVlvnihlTEVFLGIF---IGAVTFTGSIVAFGKLRGKIS--SKPLmlphrhk 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 148 ----ADIFSVFLPTIIVIPAVLEMDDLLIEFIILVAIIAGVIRVAVIGGADMPVVIAFLNSLSGIAAMSAGFIVNSIILI 223
Cdd:PRK09444 163 lnlaALVVSFLLLIVFVRTDSVGLQVFALLLMTLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLI 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 224 VAGALVGASGIILTLLMCAAMNRTLLDVLKGGFG--GTAINNEYEK-DPISTSPEDVAIQLSYAESVVIVPGYGMAVAQA 300
Cdd:PRK09444 243 VTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGtdGSSTGDDEEVgEHRETTAEEVAEMLKNSHSVIITPGYGMAVAQA 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291336540 301 QAAVKELTNTLKDKNIEVKFAIHPVAGRMPGHMNVLLAEVDIDYEDMFILEDINSEFSSTDVVIVLGANDVVNPLARTDE 380
Cdd:PRK09444 323 QYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQEDP 402

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 291336540 381 DSPIYGMPILDVDLSKQVIVIKRSMSPGYAGIANPLFVNDNTKMLFADAKEGLENIIK 438
Cdd:PRK09444 403 NSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVDAILK 460
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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