|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.18e-67 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 199.01 E-value: 1.18e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 306486604 81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
3.10e-51 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 157.39 E-value: 3.10e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 1 MNLPLT-LTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136 1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 306486604 80 QSNNLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
8.50e-47 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 146.29 E-value: 8.50e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 3 LPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSN 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 306486604 83 NLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
1.18e-43 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 138.09 E-value: 1.18e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|...
gi 306486604 81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
1.95e-40 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 130.10 E-value: 1.95e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 306486604 81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
4.14e-34 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 113.84 E-value: 4.14e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 5 LTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNl 84
Cdd:MTH00203 6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS- 84
|
90 100
....*....|....*....|....*....
gi 306486604 85 kITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00203 85 -LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-112 |
2.21e-30 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 104.04 E-value: 2.21e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 18 VMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKIT-VMMALMLII 96
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78
|
90
....*....|....*.
gi 306486604 97 ILALGLVYEWLQKGLE 112
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
5-115 |
3.04e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 96.47 E-value: 3.04e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 5 LTLTIDIMLVLVLVMVAFWLPQLNMYA-EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNN 83
Cdd:MTH00148 6 LSLLFALILSPVLLLLGLVLSKRSYSDrEKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSF 85
|
90 100 110
....*....|....*....|....*....|..
gi 306486604 84 LKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00148 86 SVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
3.30e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 96.60 E-value: 3.30e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 5 LTLTIDIMLVLVLVMVAFwlpQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNL 84
Cdd:MTH00202 10 LSILISSLLFLVSWMLSF---RSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWS 86
|
90 100
....*....|....*....|....*....
gi 306486604 85 KITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00202 87 KGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
4.60e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 96.00 E-value: 4.60e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 5 LTLTIDIMLVLVLVMVAFWL-PQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNN 83
Cdd:MTH00161 4 IILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSN 83
|
90 100 110
....*....|....*....|....*....|
gi 306486604 84 LKITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00161 84 MMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
3-113 |
2.53e-24 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 89.02 E-value: 2.53e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 3 LPLTLTIDIMLVLVLVM--VAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:COG0838 6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83
|
90 100 110
....*....|....*....|....*....|....
gi 306486604 81 SNNLKITVMMALML-IIILALGLVYEWLQKGLEW 113
Cdd:COG0838 84 FRELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
32-114 |
3.14e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 86.69 E-value: 3.14e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 32 EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLKITVMMALMLiIILALGLVYEWLQKGL 111
Cdd:MTH00055 37 EKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFL-IILTIGLIYEWVKGGL 115
|
...
gi 306486604 112 EWE 114
Cdd:MTH00055 116 EWE 118
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
8.59e-22 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 82.98 E-value: 8.59e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYA--EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAARSTAdrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*
gi 306486604 79 SQSNNLKITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
1-114 |
4.15e-21 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 80.88 E-value: 4.15e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78
|
90 100 110
....*....|....*....|....*....|....*
gi 306486604 81 SNNLKITVMMALML-IIILALGLVYEWLQKGLEWE 114
Cdd:MTH00018 79 YNQIAPFGFWTMVGfLFILTLGLIYEWIKGGLEWE 113
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
7-114 |
2.62e-20 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 79.14 E-value: 2.62e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 7 LTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKI 86
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92
|
90 100
....*....|....*....|....*....
gi 306486604 87 TVMMALMLII-ILALGLVYEWLQKGLEWE 114
Cdd:PRK06602 93 LGFVEAMIFIlVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
31-114 |
2.40e-18 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 74.20 E-value: 2.40e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 31 AEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKI-TVMMALMLIIILALGLVYEWLQK 109
Cdd:MTH00030 41 SEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKG 118
|
....*
gi 306486604 110 GLEWE 114
Cdd:MTH00030 119 GLEWD 123
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
20-113 |
1.74e-13 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 61.54 E-value: 1.74e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 20 VAFWLPQL----NMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKITVMM-ALML 94
Cdd:CHL00022 23 LAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVSAFIeALIF 100
|
90
....*....|....*....
gi 306486604 95 IIILALGLVYEWLQKGLEW 113
Cdd:CHL00022 101 VLILIVGLVYAWRKGALEW 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
7-113 |
6.34e-11 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 55.13 E-value: 6.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 7 LTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWASQSNNLKI 86
Cdd:PRK07756 16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93
|
90 100
....*....|....*....|....*...
gi 306486604 87 TVMMA-LMLIIILALGLVYEWLQKGLEW 113
Cdd:PRK07756 94 FALIEmLIFVVMLLVGLAYAWKKKVLQW 121
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
33-114 |
1.60e-09 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 51.21 E-value: 1.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 33 KNNPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQSNNLKITVMMALMLIII-LALGLVYEWLQK 109
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALFMLtVFVAYAYVWRRG 114
|
....*
gi 306486604 110 GLEWE 114
Cdd:PRK07928 115 GLEWD 119
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
33-114 |
2.70e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 45.81 E-value: 2.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 33 KNNPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKITVMM-ALMLIIILALGLVYEWLQKGL 111
Cdd:PRK08489 47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLFGLIeMLLFIVLLTIGFIYAWKKGAL 123
|
...
gi 306486604 112 EWE 114
Cdd:PRK08489 124 EWQ 126
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
1.67e-06 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 43.34 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486604 1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwasq 80
Cdd:MTH00092 2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76
|
90 100 110
....*....|....*....|....*....|...
gi 306486604 81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00092 77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
36-76 |
7.86e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 36.41 E-value: 7.86e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 306486604 36 PYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 40 SFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|