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Conserved domains on  [gi|311088098|gb|ADP68167|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Lepilemur otto]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 556.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098   1 MFVANLLLLIIPIIVAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  81 IALTMWTPLPMPFPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 161 TLSTLITTQEYLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088098 241 LFLGTFYKSDMPETYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 556.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098   1 MFVANLLLLIIPIIVAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  81 IALTMWTPLPMPFPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 161 TLSTLITTQEYLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088098 241 LFLGTFYKSDMPETYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
NADHdh pfam00146
NADH dehydrogenase;
15-305 3.32e-114

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 332.13  E-value: 3.32e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098   15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:pfam00146  11 LAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFgpG 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098   93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:pfam00146  91 LVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGtFYKSDMP 252
Cdd:pfam00146 171 WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG-GWLGPFP 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 311088098  253 ETYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 250 LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 15-299 1.62e-103

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 305.90  E-value: 1.62e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:COG1005   24 LLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpG 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQE-Y 171
Cdd:COG1005  104 LVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgG 183

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 172 LWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDM 251
Cdd:COG1005  184 LWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFP 263

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 311088098 252 PETYTTNFTTK-----TLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  264 ILPLGGLPGILwfllkTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 556.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098   1 MFVANLLLLIIPIIVAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  81 IALTMWTPLPMPFPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 161 TLSTLITTQEYLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088098 241 LFLGTFYKSDMPETYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 15-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 508.67  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00111  20 IAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFP 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00111 100 LADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWL 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDMPET 254
Cdd:MTH00111 180 IFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPEL 259

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088098 255 YTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00111 260 FTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQ 322
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 1.06e-173

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 483.74  E-value: 1.06e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPL 95
Cdd:MTH00071  21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWLI 175
Cdd:MTH00071 101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 176 IPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDMPETY 255
Cdd:MTH00071 181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088098 256 TTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00071 261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-317 3.17e-171

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 477.56  E-value: 3.17e-171
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPL 95
Cdd:MTH00134  22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWLI 175
Cdd:MTH00134 102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 176 IPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDMPETY 255
Cdd:MTH00134 182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088098 256 TTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00134 262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQ 323
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 15-316 7.68e-141

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 400.06  E-value: 7.68e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00218  17 LAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFS 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00218  97 LINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWL 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSdmpet 254
Cdd:MTH00218 177 LIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTT----- 251

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088098 255 ytTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00218 252 --INLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 3.06e-137

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 391.65  E-value: 3.06e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPL 95
Cdd:MTH00040  20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWLI 175
Cdd:MTH00040 100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 176 IPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG-TFYKSDMPET 254
Cdd:MTH00040 180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGgGSPFNEIFPI 259

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088098 255 YTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00040 260 NIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 15-313 8.15e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 339.03  E-value: 8.15e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00195  17 LAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFG 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00195  97 FSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWV 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTfyksdmpeT 254
Cdd:MTH00195 177 ILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGG--------G 248

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 311088098 255 YTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSY 313
Cdd:MTH00195 249 GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
NADHdh pfam00146
NADH dehydrogenase;
15-305 3.32e-114

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 332.13  E-value: 3.32e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098   15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:pfam00146  11 LAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFgpG 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098   93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:pfam00146  91 LVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGtFYKSDMP 252
Cdd:pfam00146 171 WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG-GWLGPFP 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 311088098  253 ETYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 250 LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 15-311 8.97e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 331.35  E-value: 8.97e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00193  17 VSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFN 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00193  97 LISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWF 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDMpet 254
Cdd:MTH00193 177 IFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL--- 253

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 311088098 255 yttnFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILM 311
Cdd:MTH00193 254 ----FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 15-302 1.82e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 327.98  E-value: 1.82e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00143  16 LAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00143  96 SSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWL 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFykSDMPET 254
Cdd:MTH00143 176 GFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGS--SVLFLL 253

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 311088098 255 YTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
Cdd:MTH00143 254 GGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 15-307 3.06e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 312.35  E-value: 3.06e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00225  16 LSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00225  96 IYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWF 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYksdmpET 254
Cdd:MTH00225 176 MFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFF-----VT 250

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 311088098 255 YTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00225 251 IDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 15-299 1.62e-103

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 305.90  E-value: 1.62e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:COG1005   24 LLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpG 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQE-Y 171
Cdd:COG1005  104 LVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgG 183

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 172 LWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDM 251
Cdd:COG1005  184 LWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFP 263

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 311088098 252 PETYTTNFTTK-----TLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  264 ILPLGGLPGILwfllkTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 15-316 3.53e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 300.11  E-value: 3.53e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:MTH00054  17 ISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYgeG 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:MTH00054  97 VVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNI 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG---TFYKS 249
Cdd:MTH00054 177 WFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGgwlVISGP 256

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088098 250 DMPETYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00054 257 TSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 15-316 1.35e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 296.26  E-value: 1.35e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMP-- 92
Cdd:MTH00216  21 IAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYErg 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQ-EY 171
Cdd:MTH00216 101 VLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQnNG 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 172 LWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDM 251
Cdd:MTH00216 181 IWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIK 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 311088098 252 P-ETYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00216 261 YfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
15-303 1.01e-97

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 290.94  E-value: 1.01e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:PRK06076  25 LCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpE 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:PRK06076 105 LVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLS 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG---TFYKS 249
Cdd:PRK06076 185 WNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGgwlPPFPL 264

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 311088098 250 DMPETYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076 265 GGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 15-311 2.60e-91

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 274.35  E-value: 2.60e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00010  18 LAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQeYLWL 174
Cdd:MTH00010  98 SFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSWI 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG---TFYKSDM 251
Cdd:MTH00010 177 LLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipSIFISDL 256

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 252 petyttNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILM 311
Cdd:MTH00010 257 ------MLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 15-316 5.97e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 254.17  E-value: 5.97e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMP-- 92
Cdd:MTH00029  22 LSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDqg 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:MTH00029 102 VFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSV 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYK--SD 250
Cdd:MTH00029 182 WLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSplDG 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 251 MPETYTTNFTTKTLLLTSLFLWI--------------RASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00029 262 IPTPPEAFSIFEQIASSKSSFWFftkssifilffiwsRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-307 5.37e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 203.59  E-value: 5.37e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPL 95
Cdd:MTH00090  12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLStlitTQEYLWLI 175
Cdd:MTH00090  92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV----SSFSLSLF 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 176 IpswpLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGtfyksdmpety 255
Cdd:MTH00090 168 V----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK----------- 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 311088098 256 ttNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00090 233 --FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-298 1.03e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 164.33  E-value: 1.03e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  18 AFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPLIN 97
Cdd:MTH00058  19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  98 LNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWLIIP 177
Cdd:MTH00058  99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFP 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 178 swPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDMpetytt 257
Cdd:MTH00058 179 --LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIM------ 250

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 311088098 258 nfttkTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058 251 -----LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 23-298 4.31e-44

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 154.34  E-value: 4.31e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  23 IERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLA-LSIALTMwtpLPMPFP----LIN 97
Cdd:CHL00032  50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAvISILLSY---LVIPFGyhlvLAD 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  98 LNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSftLSTL-ITTQEYLWLII 176
Cdd:CHL00032 127 LSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNS--LSTVdIVEAQSKYGFW 204

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 177 pSWPL------TMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKS- 249
Cdd:CHL00032 205 -GWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSi 283

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 311088098 250 ---DMPETYTTNFTTKTLLLTSLFLW--------------IRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032 284 pyiFIPELFEINKTGGVFGTTIGIFItlaktylflfisitTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-305 9.93e-30

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 114.90  E-value: 9.93e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  19 FFTLIERKILGYMQLRKGPntvgphGLLQPFADAVKLYIKEPLRPlASSTLLYITAPTLALSIALT--MWTPLPMPFPLI 96
Cdd:COG0650   20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVALAAMLLaaLLVPVLTTGPPL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098  97 NLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQE---YLW 173
Cdd:COG0650   93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088098 174 LIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTFYKSDMPe 253
Cdd:COG0650  173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALTLL- 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 311088098 254 TYTTNFTTKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:COG0650  252 LALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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