|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 775.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 81 QHHLSKEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 161 LVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 241 YGMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 321 LTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 311088275 401 LITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNILMGPTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 640.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 81 QHHLSKEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 161 LVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 241 YGMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 321 LTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 311088275 401 LITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNILMGP 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 586.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 81 QHHLSKEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 161 LVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 241 YGMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 321 LTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 311088275 401 LITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNILMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
1.28e-177 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 505.26 E-value: 1.28e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLL-NQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLkNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 80 SQHHLSKEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 160 LLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 240 GYGMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 320 GLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 311088275 400 MLITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNILMGPT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
1.24e-165 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 474.04 E-value: 1.24e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 3 KIIIPTIMLLPVTWYSTNPMVWINITLHSLTI-SLTGLFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIaLLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 82 HHLSKEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 162 VALSFIQNHMGTLNLFMMTYWSQElpnSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 242 GMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 322 TSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 311088275 402 ITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNIL 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.78e-153 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 443.65 E-value: 1.78e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLL-NQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 80 SQHHLSKEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 160 LLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 240 GYGMMRITMILN-PLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 319 HGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 311088275 399 NMLITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNILM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
9.64e-121 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 359.47 E-value: 9.64e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNpmvWINITLHSLTISLTgLFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFL-FMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 81 QHHLSKEPWerKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00163 77 ESVYKKNNY--SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 161 LVALSFIQNHMGTLNLFMMTYwsqelpNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 241 YGMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 321 LTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 311088275 401 LITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNILM 455
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
39-456 |
7.98e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 351.06 E-value: 7.98e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 39 LFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQHhlSKEPWERKKYFLITLISLQLFLIMTFAATELIMF 118
Cdd:MTH00150 3 LLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 119 YILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWssnLTWMA 198
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 199 CIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLR 278
Cdd:MTH00150 158 VFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 279 QTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTW 358
Cdd:MTH00150 238 QSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLW 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 359 WLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMS 438
Cdd:MTH00150 318 WFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLL 397
|
410
....*....|....*...
gi 311088275 439 MHIFPLFLLTLNPNILMG 456
Cdd:MTH00150 398 LHWVPLLLLILKSDLLFM 415
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
22-455 |
9.29e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 339.26 E-value: 9.29e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 22 MVWINITLHSLTISLTGLFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQHHLSKEpwERKKYFLITLIS 101
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 102 LQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTY 181
Cdd:MTH00205 97 LLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 182 WSQelpNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPF 261
Cdd:MTH00205 177 LNF---SDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 262 LMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRT 341
Cdd:MTH00205 254 FSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRS 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 342 MLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLAMTQRGKSLY 421
Cdd:MTH00205 334 MLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSS 413
|
410 420 430
....*....|....*....|....*....|....
gi 311088275 422 HMHNFNPSLTRENTLMSMHIFPLFLLTLNPNILM 455
Cdd:MTH00205 414 QISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
6.19e-110 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 332.09 E-value: 6.19e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLLNQTDSNSNnFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSM-FTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 81 QH--HLSKEPwerkKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:MTH00014 80 FKifQNNKAP----KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 159 PLLVALSFIQNHMGTLNLFMMTYWSqelPNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKL 238
Cdd:MTH00014 156 PLLMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 239 GGYGMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
Cdd:MTH00014 233 GGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 319 HGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGL 398
Cdd:MTH00014 313 HGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAI 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 311088275 399 NMLITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNIL 454
Cdd:MTH00014 393 TSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-458 |
1.17e-78 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 252.69 E-value: 1.17e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 59 DPLSSPLLALTMWLLPLTIMASqhhlSKEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 139 QtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSnLTWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQL-LLFLAFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 378 ELFITMATFSWSNMTIILTGLNMLITATYSLYMLAMTQRGKSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNILMGP 457
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDL 474
|
.
gi 311088275 458 T 458
Cdd:COG1008 475 I 475
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
52-410 |
9.93e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 234.56 E-value: 9.93e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 52 FSPTFFS-DPLSSPLLALTMWLLPLTIMASqhhlskepWERKKY----FLITLISLQLFLIMTFAATELIMFYILFESTL 126
Cdd:MTH00217 71 FGPVVFAvDGISIFFLILTALLTPICILIS--------WNSIKFlikeFLLCLLVIEILLMGVFTILDLVGFYILFEGIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 127 IPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNlfMMTYWSQELPNSWSsNLTWMACIMAFMIK 206
Cdd:MTH00217 143 IPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD--YQALCCLKIEKELQ-YFIFLGFFLSLAIK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 207 MPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMVMTSLICLRQTDLKSL 285
Cdd:MTH00217 220 IPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEaSEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRI 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 286 IAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLT 365
Cdd:MTH00217 300 IAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLA 379
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 311088275 366 NLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:MTH00217 380 NASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-410 |
1.23e-71 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 234.71 E-value: 1.23e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 59 DPLSSPLLALTMWLLPLTIMASQHhlskEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWE----EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 139 QTERLNAGLYFLFYTLIGSLPLLVALSFI----QNHMGTLNLfmmTYWSQELPNSWSSNLTWMACIMAFMIKMPLYGLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDI---ADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 215 WLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 294 MALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 311088275 374 NLIGELFITMATFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
1.50e-71 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 234.06 E-value: 1.50e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 59 DPLSSPLLALTMWLLPLTIMASQHHLSKepweRKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 139 QTeRLNAGLYFLFYTLIGSLPLLVA---LSFIQNHMGTLNLFMmtywSQELPNSWSSNLtWMACIMAFMIKMPLYGLHLW 215
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAilgLYFLGGGTFDLLELL----NLPLPFGVQTWL-FLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNP-LTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHM 294
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 295 ALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSIN 374
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 375 LIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLAMTQRG-KSLYHMHNFNPSLTRENTLMSMHIFPLFLLTLNPNI 453
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGeLSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNP 465
|
....*.
gi 311088275 454 LMGPTY 459
Cdd:TIGR01972 466 LLDLTE 471
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
51-457 |
4.02e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 230.34 E-value: 4.02e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 51 NFSPTFFS-DPLSSPLLALTMWLLPLTIMASQH---HLSKEpwerkkyFLITLISLQLFLIMTFAATELIMFYILFESTL 126
Cdd:MTH00204 73 QWGPLVFAvDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGIL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 127 IPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTywSQELPNSwSSNLTWMACIMAFMIK 206
Cdd:MTH00204 146 IPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILL--NIKLPLS-IQKWLLVGFFLSLAVK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 207 MPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPF-LMLCLWGMVMTSLICLRQTDLKSL 285
Cdd:MTH00204 223 IPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 286 IAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLT 365
Cdd:MTH00204 303 IAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLA 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 366 NLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLAMTQRGKSLYHMHnFNPSLTR-ENTLMSMHIFPL 444
Cdd:MTH00204 383 NMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLL-FSRDLNRrELLAILPLIIAI 461
|
410
....*....|...
gi 311088275 445 FLLTLNPNILMGP 457
Cdd:MTH00204 462 FLLGIVPFIIIDL 474
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
5.59e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 216.03 E-value: 5.59e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 112 ATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 192 SNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMLCLWGMVM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 272 TSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERTHNRTMLLTRGLQS 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 311088275 351 LLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-409 |
2.71e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 212.86 E-value: 2.71e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 56 FFSDPLSSPLLALTMWLLPLTIMASQHHLSKepweRKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 136 WGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLtWMACIMAFMIKMPLYGLHLW 215
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWI-FLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 295 ALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSIN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350
....*....|....*....|....*....|....*
gi 311088275 375 LIGELFITMATFSWSNMTIILTGLNMLITATYSLY 409
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
102-447 |
6.94e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 169.32 E-value: 6.94e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 102 LQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSfiqnhmgtLNLFMMTY 181
Cdd:MTH00094 71 LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 182 WSQELPNSWSSNLTwmaCIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRitmILNPLTKFMAYPF 261
Cdd:MTH00094 143 CYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 262 LMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRT 341
Cdd:MTH00094 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 342 MLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLAMTQRGKSLY 421
Cdd:MTH00094 297 IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFS 376
|
330 340
....*....|....*....|....*.
gi 311088275 422 HMHNFNPSLTRENTLMSMHIFPLFLL 447
Cdd:MTH00094 377 NFNNFNVGLSLPLVFMMFNMFWLSLF 402
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
4.94e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 161.35 E-value: 4.94e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 59 DPLSSPLLALTMWLLPLTIMASQHhLSKEPweRKKYFLI-TLISLQlflIMTFAATELIMFYILFESTLIPTLVIITRWG 137
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFASWK-VTRKP--RLFYFLMlVLYSAQ---IGVFLAQDLLLFFLMWELELVPVYLLISIWG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 138 NQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSnLTWMACIMAFMIKMPLYGLHLWLP 217
Cdd:PRK12561 132 GQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALEL-LLYAGFLIAFGVKLPIFPLHTWLP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 218 KAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLM-LCLWGMVMTSLICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK12561 210 DAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAiLGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGF 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 297 VIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLI 376
Cdd:PRK12561 290 VLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFV 369
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 311088275 377 GEL--FITMA-----TFSWSNMTIILTGLNMLITATYSLYML 411
Cdd:PRK12561 370 SELtvFLGITssdvySSTFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-415 |
7.81e-44 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 159.16 E-value: 7.81e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 52 FSPTFFSDPLSSPLLALTMWLLPLTIMASQHHLSkepWERKKYFLITLISLQLF-LIMTFAATELIMFYILFESTLIPTL 130
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMR---HERRGRRFYPLFLLLLAgMNGAFLTGDLFNLFVFFEVMLLASY 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 131 VIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSnLTWMACIMAFMIKMPLY 210
Cdd:COG0651 145 GLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 211 GLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNP--LTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAY 288
Cdd:COG0651 223 PLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 289 SSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLA 368
Cdd:COG0651 303 SSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 311088275 369 LPPSINLIGELFITMATFSWSNMTIILTGL-NMLITATYSLYMLAMTQ 415
Cdd:COG0651 383 LPPLSGFVSKWLLLQAALEAGAWLLAAVLLlSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
8.34e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 144.46 E-value: 8.34e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 58 SDPLSSPLLALTMWLLPLTIMASqhhlskepWE---RKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIIT 134
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA--------WPvtfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 135 RWGNQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSsNLTWMACIMAFMIKMPLYGLHL 214
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 215 WLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFL-MLCLWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 294 MALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMS 394
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 311088275 374 NLIGEL--FITMATFSWSNMT-----IILTGLNMLITATYSLYML 411
Cdd:PRK02546 395 GFVAELmvFVGFATSDAYTLPfrvvvVFLAAVGVILTPIYLLSML 439
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-416 |
1.53e-37 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 143.30 E-value: 1.53e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 59 DPLSSPLLALTMWLLPLTIMASQHHLskepwERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 139 QtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSwSSNLTWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFL-MLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGL---QSLLPLMSTWWLLASLTNLALPPSIN 374
Cdd:PRK06473 311 LLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 311088275 375 LIGELFITMATFswsNMTIILTGLNMLITATYSLYMLAMTQR 416
Cdd:PRK06473 391 FIAEFLVFRGSF---PIFPVQTLLCMIGTGLTAVYFLLLVNR 429
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
107-427 |
9.71e-35 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 135.46 E-value: 9.71e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 107 IMTFAATELIMFYILFESTLIPTLVIITRWGNQtERLNAGLYFLFYTLIGSLPLLVA---LSFIQNHMGTLNlfMMTYWS 183
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGvlgMGLYGSNEPTLN--FETLAN 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 184 QELPNSWSSnLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLM 263
Cdd:CHL00011 203 QSYPVALEI-LFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLV 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 264 LC-LWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERThnRTM 342
Cdd:CHL00011 282 IVgAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLV 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 343 LLTR--GLQSLLPLMSTWWLLASLTNLALPPSINLIGEL-----FITMATFSWSNMTII--LTGLNMLITATYSLYMLAM 413
Cdd:CHL00011 360 YLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELivffgIITSQKYLLMPKILItfVMAIGMILTPIYLLSMLRQ 439
|
330
....*....|....
gi 311088275 414 TQRGKSLYHMHNFN 427
Cdd:CHL00011 440 MFYGYKLFNVPNSY 453
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-418 |
9.53e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 124.05 E-value: 9.53e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 59 DPLSSPLLALTMWLLPLTIMASQHHLSKEpweRKKYFLITLISLQLflIMTFAATELIMFYILFESTLIPTLVIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENTERP---RLYYSLILLINGGI--AGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 139 QtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSwSSNLTWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPflMLCLWGMVMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 296 LVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSL---LPLMSTWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 311088275 373 INLIGELFITMATFSWSNMTIILTGLNMLITATYSLYMLAMTQRGK 418
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGR 434
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-406 |
5.86e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 113.05 E-value: 5.86e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 55 TFFSDPLSSPLLALTMWLLPLTIMASQHhlSKEPWERKKYFLiTLISLQLFLIMTFAATeLIMFYILFESTLIPTLVIIT 134
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYAIG--YGEHRQTRFYAL-FLLLLAGLLGALLTAD-LFNLFVFLEIMSLSSYALVA 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 135 RWGNQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMtywSQELPNSWSSNLTWMACIMAFMIKMPLYGLHL 214
Cdd:PRK08375 148 MGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADL---AGALAENPTVVTAFGFVLLALALKAAVFPLHT 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 215 WLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKF----MAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSS 290
Cdd:PRK08375 224 WLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYST 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 291 VSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALP 370
Cdd:PRK08375 304 VSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVP 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 311088275 371 PSINLIGELFITMATFS---WSNMTIILTGlnMLITATY 406
Cdd:PRK08375 384 PTSGFVSKWYLVVGAVEagqWLVLAVLLAS--SLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-408 |
2.94e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 105.44 E-value: 2.94e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 59 DPLSSPLLALTMWLLPLTIMASQHHLSKEpwERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 139 QTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNS----------WSSNLTWMACIMAFMIKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPltgglagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 209 LYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-------TMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 282 LKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 311088275 362 ASLTNLALPPSINLIGELFITMATFSWSnmtIILTGLNMLITATYSL 408
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISL 442
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
3.30e-20 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 85.65 E-value: 3.30e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLLNQ-TDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNpSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 311088275 80 SQHHLSKEPWERKKYFLITLISLQLFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-398 |
1.84e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 90.76 E-value: 1.84e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMIL--NPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 284 SLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190
....*....|....*....|....*....|....*...
gi 311088275 364 LTNLALPPSINLIGELFITMATFS---WSNMTIILTGL 398
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLL 424
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
2.14e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 81.70 E-value: 2.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 52 FSPTFFSDPLSSPLLALTMWLLPLTIMASQHHLSKEPWERKKYFLITLISLQLF-LIMTFAATELIMFYILFESTLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 131 VIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPnswssnLTWMACIMAFMIKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 211 GLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRItmILNPLTKFMAYPFLMLCLwGMVMTSL---ICLRQTDLKSLIA 287
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLA-GSISALLgviYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 288 YSSVSHMALVIVAILIQTPWSFMGATALM-----------IAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMS 356
Cdd:PRK08667 300 YSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTS 379
|
330 340 350
....*....|....*....|....*....|
gi 311088275 357 TWWLLASLTNLALPPSINLIGELFITMATF 386
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
104-395 |
3.67e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 79.97 E-value: 3.67e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 104 LFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMmtyWS 183
Cdd:MTH00062 82 IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSD---WG 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 184 QELPNSWSSNltWMACIMaFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMaypFLM 263
Cdd:MTH00062 159 SDDSVSLIVY--YVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLG---YLF 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 264 LCLWGMVMTSLICLRQTDLKSLIAYSSVSHMaLVIVAILIQTPWSFMGATALM-IAHGLTSSMLFCLANSNYERTHNRTM 342
Cdd:MTH00062 233 LCCLFSVFFLITACSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYEVSGSRNW 311
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 311088275 343 LLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIIL 395
Cdd:MTH00062 312 VLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
1.74e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 78.88 E-value: 1.74e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 110 FAATELIMFYILFESTLIPTLVIITRwGNQTERLNAGLYFLFyTLIGSLPLLVALSFIQNHMGTLNLFMMtywSQELPNS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADI---SQGLIND 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 190 WSSNLTWMAC--IMAFMI-KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGM------MRITMILNPLTKFM--- 257
Cdd:PRK08668 190 TSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvlyvLPGTKLFSEFGTYRgvp 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088275 258 --AYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK08668 270 lfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-379 |
6.80e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.55 E-value: 6.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 108 MTFAATELIMFYILFESTLIPTLVIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELP 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 188 NSWSSNLTWMAcIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAypFLMLC-L 266
Cdd:PRK12665 205 SGTRTALFAVL-LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDT--LLMVVaL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 267 WGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFcLANSNYERtHNRTMLLTR 346
Cdd:PRK12665 282 LTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF-LVVGLIER-QAGSSSLRR 359
|
250 260 270
....*....|....*....|....*....|....*.
gi 311088275 347 --GLQSLLPLMSTWWLLASLtNLA-LPPSINLIGEL 379
Cdd:PRK12665 360 lgGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
1.25e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 75.76 E-value: 1.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 52 FSPTFFSDPLSSPLLALTMWLLPLTIMASQHHLSKEpweRKKYFLITLIslqLFLIM----TFAATELIMFYILFESTLI 127
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLM 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 128 PTLVIITRWGNQTErLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLTWMAC--IMAFMI 205
Cdd:PRK07691 143 ASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIlfLFVFAT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-TMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKS 284
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 285 LIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASL 364
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAAL 381
|
330 340 350
....*....|....*....|....*....|....
gi 311088275 365 TNLALPPSINLIGELFITMATFSWSNMTIILTGL 398
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVL 415
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-387 |
6.16e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 73.65 E-value: 6.16e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 104 LFLIMTFAATELIM------FYILFESTLIpTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLF 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 178 MMTYWSQELpNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFM 257
Cdd:PRK08377 192 HIAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 258 AYPFLMLCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYE 335
Cdd:PRK08377 271 SVLKLVIIMATLtvFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 311088275 336 RTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFS 387
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-404 |
9.63e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 73.41 E-value: 9.63e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 115 LIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNS-WSSN 193
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIREHpLYLA 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 194 LTWMACIMAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRitmiLNPLTKFMAYPFLMLCLWG---M 269
Cdd:PRK12647 197 ILLLVLGGAFT-KSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltM 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 270 VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQ 349
Cdd:PRK12647 271 LTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 311088275 350 SLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGL----NMLITA 404
Cdd:PRK12647 351 RAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAavlgNALMVA 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-327 |
1.80e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.09 E-value: 1.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 93 KYFLITLISLQLFLIMTFAATELIMFYILFE-STLIPTLVIITRwgNQTERLNAGLYFLF-------YTLIGsLPLLVAL 164
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFiastamiFAFIG-LIFLFSL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 165 SFIQNHMGTLNLFMMTYWSQELPNSWSSnLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMM 244
Cdd:PRK08676 179 TRQALGTGTLNWTELAAHASLLSPSVLG-ASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGIL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 245 RITMILNPLTKFMAYPFLMLCLwGMVMTSLIC---LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGL 321
Cdd:PRK08676 258 RLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSL 336
|
....*.
gi 311088275 322 TSSMLF 327
Cdd:PRK08676 337 VKSGLF 342
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
112-401 |
5.10e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 70.77 E-value: 5.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 112 ATELIMFYILFESTLIPTLVIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELpnsws 191
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL----- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 192 SNLTWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITMILNPLTKFMAYPFLMLCLWGMV 270
Cdd:PRK06525 206 KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLL 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 271 MTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQ---TPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRG 347
Cdd:PRK06525 285 YGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRG 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 311088275 348 LQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNML 401
Cdd:PRK06525 365 VLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-424 |
8.16e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 70.57 E-value: 8.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 115 LIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLfmmTYWSQELPNSWSSNL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF---SELLAAAPTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 195 TWMACIMAF---MIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRitmiLNPLtkFMAYPFLMLCL---- 266
Cdd:COG1009 210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----LSPL--FALSPVWLTVVaiig 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 267 -WGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLT 345
Cdd:COG1009 283 aITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 346 RGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMATFSWSNMTIILTGLNML---ITATYSLYMLAMT----QRGK 418
Cdd:COG1009 360 GGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPK 439
|
....*.
gi 311088275 419 SLYHMH 424
Cdd:COG1009 440 TPKHPH 445
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-371 |
1.58e-12 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 69.53 E-value: 1.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 145 AGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTywSQELPNSWSSnLTWMACIMAFMIKMPLYGLHLWLPKAHVEAP 224
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR--AAHLSPFWAS-LVFLLALFGFGAKAGLVPLHVWLPRAHPAAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 225 IAGSMILAAILLKLGGYGMMRITM-ILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVA--- 300
Cdd:PRK06521 242 SHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlgl 321
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 311088275 301 --ILIQTPWSFMGATALMIA------HGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK06521 322 amVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-338 |
2.89e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 68.44 E-value: 2.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 6 IPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLLNQTDsnsnNFSPTFFSDPLSSPLLALTMWLLPLTIMASqhhls 85
Cdd:PRK07234 17 FAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLD----NFGVTLRADALSGYFILTNALVTLAVIFYC----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 86 kepWERKK--YFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITrWGNQTERLNAGLYFLFYTLIGSLPLL-- 161
Cdd:PRK07234 88 ---WESAKtrFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLig 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 162 VALSFIQNHmgtlnlfmmTYWSQELPNSWSSNLTWMAciMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:PRK07234 164 AVLVYQANG---------TFAFSGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 242 GMMRITMILNPLTKFMAYPFLMLCLWGmvmtSLICLRQTDLKSLIAYSSVSHMALVIVAILIqtpwsfmgATALMIAHGL 321
Cdd:PRK07234 233 PLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGL 300
|
330
....*....|....*..
gi 311088275 322 TSSMLFCLANSNYERTH 338
Cdd:PRK07234 301 VKSTLFLCAGALPSRNF 317
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-397 |
3.41e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 68.22 E-value: 3.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 119 YILFESTLIPTLVIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLTWMA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 199 CIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITM-ILNPLTKFMAYPF----LMLCLWGMVMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVFKANFVFTTLPFnnvfMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 274 LICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS---NYERTHNRTMLltrGLQS 350
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWK 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 311088275 351 LLPLMSTWWLLASLTNLALPPSINLIGELFI---TMATFSWSNMTIILTG 397
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYIldaFIKSNAWIGLVVLLVG 421
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
66-371 |
3.62e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 68.53 E-value: 3.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 66 LALTMWLLPLTIMA-----SQHHLSKEPWERKKYFLITLISLQLFLIMTfaATELIMFYILFESTLIPTLVIITRWGNQT 140
Cdd:PRK12650 80 LSLFFALLALVIGAvvfiySARYLPRKKGNTSFYLLMTAFMAAMLLLVL--ADDVVVLFVAWELVSLASFFLIARSGSGG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 141 ErlNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYwsqelPNSWSSNLTWMACI-----MAFMIKMPLYGLHLW 215
Cdd:PRK12650 158 E--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILH-----SDVWAEKPGLTTVVavliaVAAFTKSAQFPFHFW 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMaypfLMLCLWGM---VMTSLICLRQTDLKSLIAYSSVS 292
Cdd:PRK12650 231 LPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWN----WLLIIVGMitaLMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 311088275 293 HMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12650 307 QLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-454 |
1.69e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 66.32 E-value: 1.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 95 FLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTL 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 175 NLFMMTYWSQELPNS-WSSNLTWMACIMAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITMILNp 252
Cdd:PRK12646 192 NITEILGQADHIKNHgLFIPMIFMFLLGAFT-KSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 253 LTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAI-----LIQTPWSFMGATALMIA--------- 318
Cdd:PRK12646 269 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLfaalfhlmn 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 319 HGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTnLALPPSIN--LIGELFIT-------MATFSWS 389
Cdd:PRK12646 349 HAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMFLDaltqtgqLSQFSLI 427
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088275 390 NMTIILT--GLNMLITATYSLYMLAMTQRG----KSLYHMHNFNPSLTRENTLMSMHIFPLFLLTlnPNIL 454
Cdd:PRK12646 428 SMIIIVFigVIASIFTFTYALYMVKEVFWGkydsKVFTKKNIHEPWLFSLPSLILMVLVPVIFFV--PNIF 496
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-392 |
1.76e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 65.99 E-value: 1.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 51 NFSPTFFSDPLSSPLLALTMWLLPLTIMASQHHLSKEPWERKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTL 130
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 131 VIITrWGNQTERLNAGLYFLFYTLIGSLPL-LVALSFIQNHMGTLNlfmmtYWSQELPNSWSSNLTWMACIMAfMIKMPL 209
Cdd:PRK06589 154 FLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLD-----FVSGGLFSKNQSIILLLMFIYG-IAKTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 210 YGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMI---LNPLTKF--MAYPFLMLCLWGMVMTSLICLRQTDLKS 284
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 285 LIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASL 364
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
|
330 340
....*....|....*....|....*...
gi 311088275 365 TNLALPPSINLIGELFITMATFSWSNMT 392
Cdd:PRK06589 387 SLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-398 |
1.89e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 66.00 E-value: 1.89e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 155 IGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPnswSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAI 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 235 LLKLGGYGMMRITMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV-------IVAILIQTP- 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 307 ---WSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITM 383
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
250
....*....|....*
gi 311088275 384 ATFSWSNMTIILTGL 398
Cdd:PRK08042 382 SFFKLSNSGAFVARL 396
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-323 |
4.24e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 64.75 E-value: 4.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 9 IMLLPVTWYSTNPMVWINITLHSLTISLtGLFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMASQHHLSKEP 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLAL-ALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 89 WERKKYFLITLISLqLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGL-YFLFYTLIGSLpLLVALSFI 167
Cdd:COG1007 99 LLRGEFYALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 168 QNHMGTLNLFMMTYWSQELPNSwsSNLTWMACIM---AFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILlKLGGYGM- 243
Cdd:COG1007 177 YGATGSLNLAGIAAALAAGGAN--SPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAl 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 244 MRITMI-LNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLT 322
Cdd:COG1007 254 LRLLVEaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFM 333
|
.
gi 311088275 323 S 323
Cdd:COG1007 334 N 334
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-371 |
1.87e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.81 E-value: 1.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 75 LTIMASQHHLSKEPWERKKYFLITLISLQLFLIMTfaATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTL 154
Cdd:PRK08376 105 LAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAI--TGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 155 IGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPnSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAI 234
Cdd:PRK08376 183 LASSMVLLGIALLYGQYGTLNMAYLAVKMSENP-TVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVI 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 235 llKLGG-YGMMRITMILNPLT---KFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVS---HMAL---VIVAILIQ 304
Cdd:PRK08376 262 --KQAGlYALARVLFSIYGPAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGD 339
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088275 305 TPWSFMGATAL------MIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK08376 340 PAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-408 |
1.98e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 59.58 E-value: 1.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 52 FSPTFFSDPLSSpLLALTMWLLPLTIMAsqHHLSKEPWERKKYFLITLISLQLF-LIMTFAATELIMFYILFESTLIPTL 130
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMA--YGFGDIEHSGRRYGFPPFILLLMAgVIGSFLTGDLFNLYVWFEVMLIASF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 131 VIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMMTYWSQELPNSWSSNLTWMACIMAFMIKMPLY 210
Cdd:PRK12663 146 VLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 211 GLHlWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFL--MLCLwGMVMTSLICLRQTDLKSLIAY 288
Cdd:PRK12663 225 PFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 289 SSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLA 368
Cdd:PRK12663 303 QVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 311088275 369 LPPSINLIGELFITMATFSWSNMTIILTGLNMLITATYSL 408
Cdd:PRK12663 383 LPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
129-327 |
1.46e-07 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 53.75 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 129 TLVIitrWGNQTER-LNAGL-YFLFYTLIGSLpLLVALSFIQNHMGTlnlfmmtyWSQELPNSWSSNLTWMACImAFMIK 206
Cdd:PRK12668 130 TFLV---WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGS--------FAFGAIAGLGGTAAWLILI-GFGVN 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 207 MPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI---TMILNPLTKFMA-YPFLMLCLwgmvmtsliclrQTDL 282
Cdd:PRK12668 197 AAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELLIYIGAAMAvYGVFFALL------------ENDL 264
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 311088275 283 KSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 265 RRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
112-327 |
4.26e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.62 E-value: 4.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 112 ATELIMFYILFESTLIPTLVIItrwGNQTERLN---AGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLfmmtywSQELPN 188
Cdd:PRK12644 125 SDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRL------SELLAD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 189 SWSSNLTWMA--CIMA-FMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITMILNPLTkFMAYPFLML 264
Cdd:PRK12644 196 PPTGPAVSVAvvLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVP-VWRPTVLVL 273
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088275 265 CLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 274 GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-323 |
4.47e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 52.13 E-value: 4.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTGLFLLNQTDSNSNNFSPTFFSDPLSSPLLALTMWLLPLTIMAS 80
Cdd:PRK05777 14 ELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 81 QHHLSKEpwERKKYFLITLISLQLFLIMTfAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:PRK05777 94 RPYLEDR--GRGEFYLLVLFALLGMMVMV-SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 161 LVALSFIQNHMGTLNLFMMTywsqELPNSWSSNLTWMACIMAFMI-----KMPLYGLHLWLPKAHVEAPIAGSMILAAIL 235
Cdd:PRK05777 171 LYGMSLLYGATGSLSFAGIA----KALADGSGNSLLLLFGLVFLLvglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAP 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 236 lKLGGYGM-MRI-TMILNPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGAT 313
Cdd:PRK05777 247 -KIAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVL 325
|
330
....*....|
gi 311088275 314 ALMIAHGLTS 323
Cdd:PRK05777 326 FYLLAYLFMT 335
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
4.56e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 49.08 E-value: 4.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 137 GNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNlfmMTYWSQELPNSWSSNLTWM---ACIM--AFMIKMPLYG 211
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLN---MADLAQRIAQLPAADRALLeagAALLlvVFLIKAAMWP 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 212 LHLWLPKAHVEA--PIAGsmiLAAILLKLGGYGMMRI-TMILNPLTKFMAYPFLMLCLWGMVMTSLI----CLRQTDLKS 284
Cdd:PRK12666 229 LNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRR 305
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 311088275 285 LIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12666 306 LAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
5.17e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.80 E-value: 5.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 59 DPLSSPLLALTMWLLPLTIMASQHHLSKEPWERKkyfLITLISLQLFLIMTFAATE-LIMFYILFESTLIPTLVIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPR---FLCYLSLFTFLMMVLVTSDnYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 138 NQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLNLFMM---TYWSQELPNSWSSNLTWMACIMAFMI--------- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 206 --KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITmilnPLTKFMAYPFLMLCLWGMV---MTSLICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 281 DLKSLIAYSSVSHMALVIVAILIQTpwSFMGATALMIAHGLTSSMLFCLANS-----NYERTHNRTMlltRGLQSLLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGSvihstTVDEQDMRKM---GGLIHSIPFT 386
|
330 340 350
....*....|....*....|....*....|....*...
gi 311088275 356 STWWLLASLTNLALPPSINLIGELFITMATFSWSNMTI 393
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
91-408 |
7.58e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 48.43 E-value: 7.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 91 RKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNH 170
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 171 MGTLNLFMMTYWSQelPNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAILLklggygM 243
Cdd:MTH00208 216 FNSWNLNEILSLNN--SNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------L 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 244 MRITMILNPLTKFmaypfLMLCLWGMVMTSL----ICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSfmgATALMIAH 319
Cdd:MTH00208 287 IRTSPLISNSPWF-----LSLCLILGSLTALfaasTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNL---ALFHICTH 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 320 GLTSSMLFCLANSNYERTHN----RTMlltRGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELFITmatfSWSN 390
Cdd:MTH00208 359 AFFKAMLFLCSGSIIHSLNNeqdlRKM---GGLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEAGLA----SISN 431
|
330
....*....|....*....
gi 311088275 391 -MTIILTGLNMLITATYSL 408
Cdd:MTH00208 432 lLSIILALIATLLTAVYSF 450
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-371 |
1.06e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.90 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 93 KYFLITLISLQLFLIMTFAATELIMFyILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMG 172
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 173 TLNLFMMTYWSQELPNSWSSNLTWMACIMAFM---IKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITM 248
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHP 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 249 ILNPLTKFmaypFLMLCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTP----WSFMGATALMIAHGL 321
Cdd:PRK12649 270 IFSGTEAW----FILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 311088275 322 TSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
155-371 |
2.22e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 46.83 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 155 IGSLPLLVALSFIQNHMGTLNLFMMTYWSQELP-NSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMILAA 233
Cdd:PRK07390 182 VGDLLLLMGVVALSPLAGTLNFSDLAAWAATANlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNS 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 234 ILLKLGGYGMMRITMI--LNPLTKFmaypfLMLCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPwsf 309
Cdd:PRK07390 261 VVVATGAWVLIKLQPVlaLSPVALT-----VLIVIGTVtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQP--- 332
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088275 310 MGATALMIAHGLTSSMLFCLANSNYERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK07390 333 DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLP 394
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
92-364 |
2.47e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 92 KKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTErlnAGLYFLFYTLIGSLPLLVALSFIQNHM 171
Cdd:PRK06459 71 GKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFIIS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 172 GTLNLfmmtywsqelpNSWSSNLTWMACIMAFMIKMPLYGLHL--WLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMI 249
Cdd:PRK06459 148 GTTNF-----------SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTIL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 250 LNPL-TKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAI--------LIQTPWSFMGATALM--IA 318
Cdd:PRK06459 217 TQTIpIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILysFA 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088275 319 HGLTSSMLFCLANSNYERTHNR------------TMLLTRGLQSLLPL---MSTWWLLASL 364
Cdd:PRK06459 297 HSVAKTGLFLSSGLQEKQSITYskkirnrwielgLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-327 |
4.05e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.32 E-value: 4.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 112 ATELIMFYILFESTLIPTLVIITRWGNQTERLNAGL-YFLFYTLIGSLPLL-VALSFIQNHMGTLNLFMMTYWSQELPNS 189
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVLNSGQSFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 190 WSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAaILLKLGgygMMRITMILNPLTKFmaypFLMLCLWGM 269
Cdd:MTH00196 92 VSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG---IFSILVSIGLNVNI----LLIGGLFSL 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 311088275 270 VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:MTH00196 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-449 |
2.44e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 40.45 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 105 FLIMTFAATELIMFYILFESTLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNHMGTLN---LFMMty 181
Cdd:MTH00020 123 LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDfssVFNM-- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 182 wsqeLPNSWSSNLTWMaCIMAF---MIKMPLYGLHLWLPKAhVEAPIAGS-MILAAILLKLGGYGMMR------------ 245
Cdd:MTH00020 201 ----VVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRssplfeqaplal 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 246 -ITMILNPLTKFMAypflmlclwgmvmtSLICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSS 324
Cdd:MTH00020 275 iIVTIVGSLTVFFA--------------ATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 325 MLFCLANSN-YERTHNRTMLLTRGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELFITMATFSWSNMtiiLTGL 398
Cdd:MTH00020 338 LLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPyltgfYSKDLILELAFGQYYLIFAYW---LGCF 414
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 311088275 399 NMLITATYSLYMLAMTQRGkslyhmhnfNPSLTRENtLMSMH------IFPLFLLTL 449
Cdd:MTH00020 415 SALLTAFYSIRLIYLTFLS---------NTNLKKAV-FFHLHegdwnlLLPLGILAL 461
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
7.26e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 38.86 E-value: 7.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 262 LMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHNRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 311088275 342 MLLTRGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-344 |
8.97e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.22 E-value: 8.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 91 RKKYFLITLISLQLFLIMTFAATELIMFYILFESTLIPTLVIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNH 170
Cdd:PRK06591 113 RKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIAS-GNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSI 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 171 MGTLNLFMMTYWSQELPNSWSSNLTWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMIL 250
Cdd:PRK06591 192 TGSLNMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYII 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088275 251 ---NPLTKFMAYPFLMLCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIvaILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK06591 272 igyETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVF--LLYVTENGIIILPSLLLADSINKIALF 349
|
250
....*....|....*....
gi 311088275 328 CLA--NSNYERTHNRTMLL 344
Cdd:PRK06591 350 LIDayNESYKREPNKVLII 368
|
|
| |
