|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 781.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 1 MLKIIIPTIMLLPMTWYSTNPMIWINITLHSLTISFTGLSLLNQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 81 QYHLAKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 161 LVALSSIQNYMGTLNLFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 321 LTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 311088387 401 LITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILMGPTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 640.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 1 MLKIIIPTIMLLPMTWYSTNPMIWINITLHSLTISFTGLSLLNQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 81 QYHLAKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 161 LVALSSIQNYMGTLNLFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 321 LTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 311088387 401 LITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILMGP 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 590.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 1 MLKIIIPTIMLLPMTWYSTNPMIWINITLHSLTISFTGLSLLNQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 81 QYHLAKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 161 LVALSSIQNYMGTLNLFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 321 LTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 311088387 401 LITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
3.46e-179 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 509.11 E-value: 3.46e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 1 MLKIIIPTIMLLPMTWYSTNPMIWINITLHSLTISFTGLSLL-NQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLkNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 80 SQYHLAKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 160 LLVALSSIQNYMGTLNLFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 240 GYGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 320 GLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 311088387 400 MLITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILMGPT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
5.25e-167 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 477.89 E-value: 5.25e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 3 KIIIPTIMLLPMTWYSTNPMIWINITLHSLTISFTGLSLLNQADNNSNNFSLTSFS-DPLSSPLLILAMWLFPLTVMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSyDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 82 YHLAKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 162 VALSSIQNYMGTLNLFMMTYWTQElinSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 242 GMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 322 TSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 311088387 402 ITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKIL 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.00e-152 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 440.95 E-value: 2.00e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 1 MLKIIIPTIMLLPMTWYSTNPMIWINITLHSLTISFTGLSLLNQADNNS-NNFSLTSFSDPLSSPLLILAMWLFPLTVMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSwHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 80 SQYHLAKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 160 LLVALSSIQNYMGTLNLFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 240 GYGMMRITIILN-PLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 319 HGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 311088387 399 NMLITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
1.42e-119 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 356.77 E-value: 1.42e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 1 MLKIIIPTIMLLPMTWYSTNpmiWINITLHSLTISFTgLSLLNQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFL-FMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 81 QYHLAKEPWerKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00163 77 ESVYKKNNY--SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 161 LVALSSIQNYMGTLNLFMMTYwtqeliNSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 321 LTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 311088387 401 LITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILM 455
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
39-456 |
2.00e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 342.59 E-value: 2.00e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 39 LSLLNQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMASQYhlAKEPWERKKHFLFTLISLQLFLILTFTATELIMF 118
Cdd:MTH00150 3 LLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 119 YILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSWssnLMWVA 198
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 199 CIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLR 278
Cdd:MTH00150 158 VFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 279 QTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTW 358
Cdd:MTH00150 238 QSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLW 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 359 WLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNMLITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMS 438
Cdd:MTH00150 318 WFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLL 397
|
410
....*....|....*...
gi 311088387 439 MHVFPLLLLTLNPKILMG 456
Cdd:MTH00150 398 LHWVPLLLLILKSDLLFM 415
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
22-455 |
9.54e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 331.56 E-value: 9.54e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 22 MIWINITLHSLTISFTGLSLLNQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMASQYHLAKEpwERKKHFLFTLIS 101
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 102 LQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTY 181
Cdd:MTH00205 97 LLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 182 WTQELINSWssnLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPF 261
Cdd:MTH00205 177 LNFSDFYLF---LYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 262 LMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRT 341
Cdd:MTH00205 254 FSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRS 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 342 MLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNMLITATYSLHMLMMTQRGKPPY 421
Cdd:MTH00205 334 MLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSS 413
|
410 420 430
....*....|....*....|....*....|....
gi 311088387 422 HAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILM 455
Cdd:MTH00205 414 QISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
1.33e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 331.32 E-value: 1.33e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 1 MLKIIIPTIMLLPMTWYSTNPMIWINITLHSLTISFTGLSLLNQADNNSNnFSLTSFSDPLSSPLLILAMWLFPLTVMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSM-FTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 81 Q--YHLAKEPwerkKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSL 158
Cdd:MTH00014 80 FkiFQNNKAP----KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 159 PLLVALSSIQNYMGTLNLFMMTYWTQELinsWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKL 238
Cdd:MTH00014 156 PLLMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 239 GGYGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIA 318
Cdd:MTH00014 233 GGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 319 HGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGL 398
Cdd:MTH00014 313 HGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAI 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 311088387 399 NMLITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKIL 454
Cdd:MTH00014 393 TSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-458 |
1.30e-80 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 257.70 E-value: 1.30e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASqyhlAKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNlFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALT-FDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 298 VVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 378 ELFITMASFSWSNMTIILTGLNMLITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILMGP 457
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDL 474
|
.
gi 311088387 458 T 458
Cdd:COG1008 475 I 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
3.59e-73 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 238.30 E-value: 3.59e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASQYHLAKepweRKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QTeRLNAGLYFLFYTLVGSLPLLVALSSIqnYMGTLNLFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGL--YFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMV-CLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAAlGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 298 VVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 378 ELFITMASFSWSNMTIILTGLNMLITATYSLHMLMMTQRGKPPYHAHNFKPSL-TRENTLMSMHVFPLLLLTLNPKILMG 456
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLnGREIAVLAPLVVLILFLGLYPNPLLD 468
|
...
gi 311088387 457 PTY 459
Cdd:TIGR01972 469 LTE 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-458 |
1.31e-71 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 234.71 E-value: 1.31e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASQyhlaKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASW----EEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QTERLNAGLYFLFYTLVGSLPLLVALSSI----QNYMGTLNLfmmTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDI---ADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMV-CLWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITlGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 294 MALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 374 NLIGELFITMASFSWSNMTIILTGLNMLITATYslhMLMMTQR---GKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLN 450
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVY---SLWLYQRvmfGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVY 469
|
....*...
gi 311088387 451 PKILMGPT 458
Cdd:PRK05846 470 PKPLLDVI 477
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
59-410 |
2.31e-68 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 225.70 E-value: 2.31e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASqyhlakepWERK----KHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIIT 134
Cdd:MTH00217 79 DGISIFFLILTALLTPICILIS--------WNSIkfliKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 135 RWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNlfMMTYWTQELINSWSsNLMWVACIMAFMIKMPLYGFHL 214
Cdd:MTH00217 151 IWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD--YQALCCLKIEKELQ-YFIFLGFFLSLAIKIPKIPFHI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00217 228 WLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEaSEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAH 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 294 MALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:MTH00217 308 MGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSC 387
|
330 340 350
....*....|....*....|....*....|....*..
gi 311088387 374 NLIGELFITMASFSWSNMTIILTGLNMLITATYSLHM 410
Cdd:MTH00217 388 NFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.84e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.57 E-value: 1.84e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 112 ATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 192 SNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGMVM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 272 TSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANS-NYERIHNRTMLLARGLQS 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 311088387 351 LLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
59-410 |
1.58e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 221.09 E-value: 1.58e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASQ---YHLAKEpwerkkhFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITR 135
Cdd:MTH00204 82 DGVSLFFILLTTLLIPICILISWksiKFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 136 WGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTywtqeLINSWSSNLMW--VACIMAFMIKMPLYGFH 213
Cdd:MTH00204 155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILL-----NIKLPLSIQKWllVGFFLSLAVKIPQIPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPF-LMVCLWGMVMTSLICLRQTDLKSLIAYSSVS 292
Cdd:MTH00204 230 IWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 293 HMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPS 372
Cdd:MTH00204 310 HMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLS 389
|
330 340 350
....*....|....*....|....*....|....*...
gi 311088387 373 INLIGELFITMASFSWSNMTIILTGLNMLITATYSLHM 410
Cdd:MTH00204 390 CNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
59-419 |
6.56e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 209.39 E-value: 6.56e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASQYHLAKepweRKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGT---LNLFMMTYWTQELINSWssnlMWVACIMAFMIKMPLYGFHLW 215
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 216 LPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 295 ALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSIN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 311088387 375 LIGELFITMASFSWSNMTIILTGLNMLITATYSLHMLMMTQRGKP 419
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAP 457
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
89-447 |
2.35e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 165.46 E-value: 2.35e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 89 WERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSsiq 168
Cdd:MTH00094 58 SEKNFNLLILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--- 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 169 nymgtLNLFMMTYWTQELINSWSSNLMwvaCIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRiti 248
Cdd:MTH00094 135 -----KNFFFFSLCYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR--- 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 249 ILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFC 328
Cdd:MTH00094 204 ILGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFY 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 329 LANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNMLITATYSL 408
Cdd:MTH00094 284 LIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
330 340 350
....*....|....*....|....*....|....*....
gi 311088387 409 HMLMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLL 447
Cdd:MTH00094 364 FLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWLSLF 402
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-455 |
3.16e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 159.04 E-value: 3.16e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASqYHLAKEPwerkKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS-WKVTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNlFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFT-FDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILgVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 298 VVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 378 EL--FITMA-----SFSWSNMTIILTGLNMLITATYSLHML--MMTQRGKPPYHAHNFKPSLT-RENTLMSMHVFPLLLL 447
Cdd:PRK12561 371 ELtvFLGITssdvySSTFRTITILLAAVGLILTPIYLLSMLrrVFYGPRSELLPALAVVEDAKpRELFIALSLLVPIIGI 450
|
....*...
gi 311088387 448 TLNPKILM 455
Cdd:PRK12561 451 GFYPKLAT 458
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
59-387 |
6.38e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 156.85 E-value: 6.38e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFpltVMASQYHLAKEPWERKKHFLFTLISLQLF-LILTFTATELIMFYILFEATLIPTLIIITRWG 137
Cdd:COG0651 75 DRLSALFLLLTALVA---LAVLLYSIGYMRHERRGRRFYPLFLLLLAgMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 138 NQtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELiNSWSSNLMWVACIMAFMIKMPLYGFHLWLP 217
Cdd:COG0651 152 TK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL-DPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 218 KAHVEAPIAGSMVLAAILLKLGGYGMMRI-TIILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYSSVSHMA 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLgLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 296 LVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330
....*....|..
gi 311088387 376 IGELFITMASFS 387
Cdd:COG0651 390 VSKWLLLQAALE 401
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
7.28e-37 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 141.77 E-value: 7.28e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 58 SDPLSSPLLILAMWLFPLTVMASqyhlakepWE---RKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIIT 134
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA--------WPvtfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 135 RWGNQtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNlFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHL 214
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPT-FDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLgVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 294 MALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMS 394
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 311088387 374 NLIGEL--FITMA-----SFSWSNMTIILTGLNMLITATYSLHML 411
Cdd:PRK02546 395 GFVAELmvFVGFAtsdayTLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-411 |
1.74e-35 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 137.52 E-value: 1.74e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASQYHLakepwERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSwSSNLMWVACIMAFMIKMPLYGFHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVclWGMVMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLAT--WAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 296 LVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGL---QSLLPLMSTWWLLASLTNLALPPS 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 311088387 373 INLIGELFITMASFSWSNMTIILTGLNMLITATYSLHML 411
Cdd:PRK06473 389 VGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-411 |
1.14e-34 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 135.07 E-value: 1.14e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 110 FTATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMG---TLNLfmmtywtQEL 186
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSnepTLNF-------ETL 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 187 IN-SWSSNL---MWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFL 262
Cdd:CHL00011 201 ANqSYPVALeilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 263 M-VCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIhnRT 341
Cdd:CHL00011 281 ViVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RL 358
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 311088387 342 MLLAR--GLQSLLPLMSTWWLLASLTNLALPPSINLIGEL-----FITMASFSWSNMTII--LTGLNMLITATYSLHML 411
Cdd:CHL00011 359 VYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELivffgIITSQKYLLMPKILItfVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-418 |
2.12e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 123.28 E-value: 2.12e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASQYHLakepwERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENT-----ERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSwSSNLMWVACIMAFMIKMPLYGFHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVclWGMVMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAI--IGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 296 LVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSL---LPLMSTWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 311088387 373 INLIGELFITMASFSWSNMTIILTGLNMLITATYSLHMLMMTQRGK 418
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGR 434
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-406 |
1.40e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 103.04 E-value: 1.40e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFpltVMASQYHLA-KEPWERKKHFLFTLISLQLFLILtFTATeLIMFYILFEATLIPTLIIITRWG 137
Cdd:PRK08375 76 DSLSALFLLVTSILA---IAALLYAIGyGEHRQTRFYALFLLLLAGLLGAL-LTAD-LFNLFVFLEIMSLSSYALVAMGG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 138 NQtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTywtQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLP 217
Cdd:PRK08375 151 DR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA---GALAENPTVVTAFGFVLLALALKAAVFPLHTWLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 218 KAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKF----MAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 294 MALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK08375 307 MGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350
....*....|....*....|....*....|....*.
gi 311088387 374 NLIGELFITMASFS---WSNMTIILTGlnMLITATY 406
Cdd:PRK08375 387 GFVSKWYLVVGAVEagqWLVLAVLLAS--SLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-422 |
1.09e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 97.73 E-value: 1.09e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASQYHLAKEPWERKKHFLFTLisLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLG--LEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINS----------WSSNLMWVACIMAFMIKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPltgglagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 209 LYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI-------TIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 282 LKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 311088387 362 ASLTNLALPPSINLIGELFITMASFSWSnmtIILTGLNMLITATYSL----HMLMMTQRGKPPYH 422
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLvgyfRAWYSLFFGKPKSG 460
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.42e-19 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 83.73 E-value: 1.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 1 MLKIIIPTIMLLPMTWYSTNPMIWINITLHSLTISFTGLSLLNQADNNSNNFSLTSFS-DPLSSPLLILAMWLFPLTVMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGiDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 311088387 80 SQYHLAKEPWERKKHFLFTLISLQLFLILT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
213-398 |
7.48e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 88.83 E-value: 7.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVC--LWGMVMTSLICLRQTDLKSLIAYSS 290
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfgLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 291 VSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALP 370
Cdd:PRK06458 314 IEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
170 180 190
....*....|....*....|....*....|.
gi 311088387 371 PSINLIGELFI---TMASFSWSNMTIILTGL 398
Cdd:PRK06458 394 PFGVFISEFLIltaGLARGPLLIAILLLLLL 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
96-395 |
5.68e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 85.75 E-value: 5.68e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 96 LFTLISLqLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLN 175
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 176 LFMmtyWTQELINSWSSNlmWVACIMaFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTK 255
Cdd:MTH00062 154 FSD---WGSDDSVSLIVY--YVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 256 FMaypFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYE 335
Cdd:MTH00062 228 LG---YLFLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYE 304
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 336 RIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIIL 395
Cdd:MTH00062 305 VSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
2.74e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 78.11 E-value: 2.74e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 110 FTATELIMFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFyTLVGSLPLLVALSSIQNYMGTLNLFMMTywtQELINS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADIS---QGLIND 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 190 WSSNLMWVAC--IMAFMI-KMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGM-MRITII-----LNPLTKFMAYP 260
Cdd:PRK08668 190 TSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFlLVLYVLpgtklFSEFGTYRGVP 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088387 261 ---FLMVCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:PRK08668 270 lfnYILAWLGNIsiIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
2.04e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 75.54 E-value: 2.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 52 FSLTSFSDPLSSPLLILAMWLFPLTVMASQYHLAKEPWERKKHFLFTLISLQLF-LILTFTATELIMFYILFEATLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 131 IIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELinswssNLMWVACIMAFMIKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIL------SLVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 211 GFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRitIILNPLTKFMAYPFLMVCLwGMVMTSL---ICLRQTDLKSLIA 287
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILLA-GSISALLgviYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 288 YSSVSHMALVVVAILIQTPWSFMGATTLM-----------IAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMS 356
Cdd:PRK08667 300 YSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTS 379
|
330 340 350
....*....|....*....|....*....|
gi 311088387 357 TWWLLASLTNLALPPSINLIGELFITMASF 386
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-424 |
1.77e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 72.49 E-value: 1.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 115 LIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSWssnL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSP---L 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 195 MWVACIMAF---MIKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRitiiLNPLtkFMAYPFLM-----VC 265
Cdd:COG1009 210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----LSPL--FALSPVWLtvvaiIG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 266 LWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQtpwSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLA 345
Cdd:COG1009 283 AITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 346 RGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNML---ITATYSLHMLMMT----QRGK 418
Cdd:COG1009 360 GGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPK 439
|
....*.
gi 311088387 419 PPYHAH 424
Cdd:COG1009 440 TPKHPH 445
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-330 |
2.10e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 72.77 E-value: 2.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 96 LFTLISLQLFLiltftATELIMFYILFEATLIPTLIIITRWGNQTErlNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLN 175
Cdd:PRK12650 118 AFMAAMLLLVL-----ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 176 LFMM---TYWTQeliNSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP 252
Cdd:PRK12650 191 LSGIlhsDVWAE---KPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHD 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 253 LTKFMAypFLMVClwGM---VMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCL 329
Cdd:PRK12650 268 VAVWNW--LLIIV--GMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFML 343
|
.
gi 311088387 330 A 330
Cdd:PRK12650 344 I 344
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-404 |
2.51e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 72.26 E-value: 2.51e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 115 LIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMtYWTQELINSWSSNL 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSEL-LASGDVIREHPLYL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 195 MWVACIM--AFMiKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRitiiLNPLTKFMAYPFLMVCLWG--- 268
Cdd:PRK12647 196 AILLLVLggAFT-KSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGglt 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 269 MVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGL 348
Cdd:PRK12647 270 MLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGL 349
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 349 QSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGL----NMLITA 404
Cdd:PRK12647 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAavlgNALMVA 409
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-379 |
5.19e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.77 E-value: 5.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 105 FLILT------FTATELIMFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFM 178
Cdd:PRK12665 117 YLILVagvsnaFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMAD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 179 MTYWTQELiNSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPlTKFMA 258
Cdd:PRK12665 196 LAVRLDEL-PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLD 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 259 YPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFcLANSNYERiH 338
Cdd:PRK12665 274 TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF-LVVGLIER-Q 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 311088387 339 NRTMLLAR--GLQSLLPLMSTWWLLASLtNLA-LPPSINLIGEL 379
Cdd:PRK12665 352 AGSSSLRRlgGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-387 |
1.18e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 69.80 E-value: 1.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 104 LFLILTFTATELIM------FYILFEATLIpTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLF 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 178 MMTYWTQElINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFM 257
Cdd:PRK08377 192 HIAQLAGT-IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 258 AYPFLMVCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYE 335
Cdd:PRK08377 271 SVLKLVIIMATLtvFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 311088387 336 RIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFS 387
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
203-327 |
1.18e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 69.78 E-value: 1.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 203 FMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVCLwGMVMTSLIC---LRQ 279
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQ 294
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 311088387 280 TDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-457 |
2.15e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 69.40 E-value: 2.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 95 FLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTL 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 175 NLFMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITIILNpL 253
Cdd:PRK12646 192 NITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-L 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 254 TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAI-----LIQTPWSFMGATTLMIA---------H 319
Cdd:PRK12646 270 SNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLfaalfhlmnH 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 320 GLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTnLALPPSIN--LIGELFIT-------MASFSWSN 390
Cdd:PRK12646 350 AIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMFLDaltqtgqLSQFSLIS 428
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 311088387 391 MTIILT--GLNMLITATYSLHMLMMTQRGkpPYHAHNFKPSLTRENTLMSMHvfPLLLLTLNPKILMGP 457
Cdd:PRK12646 429 MIIIVFigVIASIFTFTYALYMVKEVFWG--KYDSKVFTKKNIHEPWLFSLP--SLILMVLVPVIFFVP 493
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-392 |
3.14e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 68.30 E-value: 3.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 47 NNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMASQYHLAKEPWERKKHFLFTLISLQLFLILTFTATELIMFYILFEATL 126
Cdd:PRK06589 70 MDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 127 IPTLIIITrWGNQTERLNAGLYFLFYTLVGSLPL-LVALSSIQNYMGTLNlfmmtyWTQELINSWSSNLMWVACIMAFMI 205
Cdd:PRK06589 150 ISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLD------FVSGGLFSKNQSIILLLMFIYGIA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 206 KMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITII---LNPLTKF--MAYPFLMVCLWGMVMTSLICLRQT 280
Cdd:PRK06589 223 KTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTD 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 281 DLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWL 360
Cdd:PRK06589 303 NIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIIS 382
|
330 340 350
....*....|....*....|....*....|..
gi 311088387 361 LASLTNLALPPSINLIGELFITMASFSWSNMT 392
Cdd:PRK06589 383 ISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-338 |
3.77e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 68.05 E-value: 3.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 51 NFSLTSFSDPLSSPLLILAMWLFPLTVMASqyhlakepWERKK--HFLFTLISLQLFLILTFTATELIMFYILFEATLIP 128
Cdd:PRK07234 58 NFGVTLRADALSGYFILTNALVTLAVIFYC--------WESAKtrFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 129 TLIIITrWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLfmmtywtQELINSWSSNLMWVAciMAFMIKMP 208
Cdd:PRK07234 130 TFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAF-------SGLATADPEAFALIA--LGLLVKGG 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 209 LYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGmvmtSLICLRQTDLKSLIAY 288
Cdd:PRK07234 200 IFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAF 275
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 311088387 289 SSVSHMALVVVAILIqtpwsfmgATTLMIAHGLTSSMLFCLANSNYERIH 338
Cdd:PRK07234 276 STISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNF 317
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
5.00e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 67.67 E-value: 5.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 52 FSLTSFSDPLSSPLLILAMWLFPLTVMASQYHLAKEpweRKKHFLFTLIslqLFLIL----TFTATELIMFYILFEATLI 127
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLM 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 128 PTLIIITRWGNQTErLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSWSSNLMWVAC--IMAFMI 205
Cdd:PRK07691 143 ASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIlfLFVFAT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 206 KMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI-TIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKS 284
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 285 LIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASL 364
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAAL 381
|
330 340 350
....*....|....*....|....*....|....
gi 311088387 365 TNLALPPSINLIGELFITMASFSWSNMTIILTGL 398
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVL 415
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
111-401 |
2.00e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 65.77 E-value: 2.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 111 TATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELinsw 190
Cdd:PRK06525 131 YSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL---- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 191 sSNLMWVACIMAFMIKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGM 269
Cdd:PRK06525 206 -KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 270 VMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQ---TPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLAR 346
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 311088387 347 GLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITMASFSWSNMTIILTGLNML 401
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-397 |
1.24e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 63.21 E-value: 1.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 119 YILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSWSSNLMWVA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 199 CIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITI-ILNPLTKFMAYPF----LMVCLWGMVMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVFKANFVFTTLPFnnvfMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 274 LICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLP 353
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMP 374
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 311088387 354 LMSTWWLLASLTNLALPPSINLIGELFI---TMASFSWSNMTIILTG 397
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYIldaFIKSNAWIGLVVLLVG 421
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
117-371 |
9.47e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 60.67 E-value: 9.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 117 MFYILFEA-TLIPTLIIITrwgNQTERLN--AGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTywTQELINSWSSn 193
Cdd:PRK06521 137 SFLVAWETmSLSSWFLVIA---NHREAEIrrAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR--AAHLSPFWAS- 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 194 lmwVACIMAFM---IKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITI-ILNPLTKFMAYPFLMVCLWGM 269
Cdd:PRK06521 211 ---LVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 270 VMTSLICLRQTDLKSLIAYSSVSHMALVVVAI---LI--------QTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIH 338
Cdd:PRK06521 288 VLGVLYALAEHDLKRLLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATG 367
|
250 260 270
....*....|....*....|....*....|...
gi 311088387 339 NRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK06521 368 TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
39-408 |
2.65e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 59.21 E-value: 2.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 39 LSLLNQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMASQYHLAKEPweRKKHFLFTLISLQLFLILTFTATELIMF 118
Cdd:MTH00208 86 ISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDP--NKNAFFRLLIIFLLNMLILTSSNNLFLL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 119 YILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQelINSWSSNLMWVA 198
Cdd:MTH00208 164 FIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNN--SNSFLINILLFG 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 199 CIMAFMIKMPLYGFHLWLPKAhVEAPIAGS-------MVLAAILLklggygMMRITIILNPLTKFmaypfLMVCLWGMVM 271
Cdd:MTH00208 242 ILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWF-----LSLCLILGSL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 272 TSL----ICLRQTDLKSLIAYSSVSHMALVVVAILIQTPW-SFMGATTlmiaHGLTSSMLFCLANSnyeRIHN------- 339
Cdd:MTH00208 310 TALfaasTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNlALFHICT----HAFFKAMLFLCSGS---IIHSlnneqdl 382
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 311088387 340 RTMllaRGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELfiTMASFSwSNMTIILTGLNMLITATYSL 408
Cdd:MTH00208 383 RKM---GGLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEA--GLASIS-NLLSIILALIATLLTAVYSF 450
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-323 |
9.36e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 57.43 E-value: 9.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 9 IMLLPMTWYSTNPMIWINITLHSLTISFtGLSLLNQADNNSNNFSLTSFSDPLSSPLLILAMWLFPLTVMASQYHLAKEP 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLAL-ALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 89 WERKKHFLFTLISLqLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGL-YFLFYTLVGSLpLLVALSSI 167
Cdd:COG1007 99 LLRGEFYALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 168 QNYMGTLNLFMMTYWTQEliNSWSSNLMWVACIM---AFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILlKLGGYGM- 243
Cdd:COG1007 177 YGATGSLNLAGIAAALAA--GGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAl 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 244 MRI-TIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLT 322
Cdd:COG1007 254 LRLlVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFM 333
|
.
gi 311088387 323 S 323
Cdd:COG1007 334 N 334
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-398 |
1.21e-08 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 57.14 E-value: 1.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 155 VGSLPLLVALSSIQNYMGTLNLFMMTYWTQELInswSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAI 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 235 LLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV-------VVAILIQTP- 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 307 ---WSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITM 383
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
250
....*....|....*
gi 311088387 384 ASFSWSNMTIILTGL 398
Cdd:PRK08042 382 SFFKLSNSGAFVARL 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-371 |
1.52e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.56 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 114 ELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELInSWSSN 193
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENP-TVVAK 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 194 LMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAIllKLGG-YGMMRITI-ILNPLTKFMAYPFLMVCL--WGM 269
Cdd:PRK08376 221 IALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVI--KQAGlYALARVLFsIYGPAINLATVGWVIIILgcLTM 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 270 VMTSLICLRQTDLKSLIAYSSVSH---------MALVVVAILIQTPWSFM---GATTLMIAHGLTSSMLFCLANSNYERI 337
Cdd:PRK08376 299 FVGVAMAVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYET 378
|
250 260 270
....*....|....*....|....*....|....
gi 311088387 338 HNRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK08376 379 GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
56-408 |
2.09e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.03 E-value: 2.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 56 SFSDPLSSPLLILAMWLFPLTVMAsqYHLAKEPWERKKHFLFTLISLQLF-LILTFTATELIMFYILFEATLIPTLIIIT 134
Cdd:PRK12663 72 QFTGDSLSALMVTTASFVATAIMA--YGFGDIEHSGRRYGFPPFILLLMAgVIGSFLTGDLFNLYVWFEVMLIASFVLIT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 135 rWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSwsSNLMWVACIM--AFMIKMPLYGF 212
Cdd:PRK12663 150 -LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDT--ATLTTIALLFllAFGMKAALFPF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 213 HlWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFL--MVCLwGMVMTSLICLRQTDLKSLIAYSS 290
Cdd:PRK12663 227 M-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGYQV 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 291 VSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALP 370
Cdd:PRK12663 305 ISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLP 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 311088387 371 PSINLIGELFITMASFSWSNMTIILTGLNMLITATYSL 408
Cdd:PRK12663 385 PFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
90-305 |
2.87e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 52.64 E-value: 2.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 90 ERKKHFLFTLISLQLFLILTF----TATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALS 165
Cdd:TIGR01770 95 SKEKINKFEFYILLLFALLGIfllvSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGIS 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 166 SIQNYMGTLNL-FMMTYWTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLaAILLKLGGYGMM 244
Cdd:TIGR01770 175 LIYGFTGSLNFeDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFF-SIVPKIAIFAVF 253
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 311088387 245 rITIILNPLTKFMA--YPFLMVC-LWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQT 305
Cdd:TIGR01770 254 -LRLFLYILFGFSEawQIFLAIIaFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGT 316
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
4.01e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.62 E-value: 4.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 111 TATELIMFYILFEATLIPTLIIItrwGNQTERLN---AGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLfmmtywtQELI 187
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRL-------SELL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 188 -NSWSSNLMWVA--CIMA-FMIKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITiilnPLTKFMAYPFL 262
Cdd:PRK12644 194 aDPPTGPAVSVAvvLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVPVWRP 268
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 311088387 263 MVCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:PRK12644 269 TVLVLGlatMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-371 |
2.89e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.83 E-value: 2.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 93 KHFLFTLISLQLFLILTFTATELIMFyILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMG 172
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 173 TLNLFMMTYWTQELINSWSSNLMWVACIMAFM---IKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITI 248
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHP 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 249 ILNPLTKFmaypFLMVCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTP----WSFMGATTLMIAHGL 321
Cdd:PRK12649 270 IFSGTEAW----FILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 311088387 322 TSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-327 |
7.22e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 48.35 E-value: 7.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 136 WGNQTER-LNAGL-YFLFYTLVGSLpLLVALSSIQNYMGTLNLfmmtywtqELINSWSSNLMWVACImAFMIKMPLYGFH 213
Cdd:PRK12668 134 WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAF--------GAIAGLGGTAAWLILI-GFGVNAAFPPLH 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI---TIILNPLTKFMA-YPFLMVCLwgmvmtsliclrQTDLKSLIAYS 289
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELLIYIGAAMAvYGVFFALL------------ENDLRRLLSYH 271
|
170 180 190
....*....|....*....|....*....|....*...
gi 311088387 290 SVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:PRK12668 272 IVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
155-371 |
9.00e-06 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 47.98 E-value: 9.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 155 VGSLPLLVALSSIQNYMGTLNLFMMTYWTQEL-INSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAhVEAPIAGSMVLAA 233
Cdd:PRK07390 182 VGDLLLLMGVVALSPLAGTLNFSDLAAWAATAnLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNS 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 234 ILLKLGGYgmmrITIILNPLtkFMAYPF---LMVCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPws 308
Cdd:PRK07390 261 VVVATGAW----VLIKLQPV--LALSPValtVLIVIGTVtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQP-- 332
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088387 309 fMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK07390 333 -DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLP 394
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
2.21e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 46.77 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 137 GNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELiNSWSSNLMWVACIM---AFMIKMPLYGFH 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQL-PAADRALLEAGAALllvVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 214 LWLPKAHVEA--PIAGsmvLAAILLKLGGYGMMRI-TIILNPLTKFMAYPFLMVCLWGMVMTSLI----CLRQTDLKSLI 286
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLA 307
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 311088387 287 AYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLFCLA 330
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
96-449 |
4.16e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.84 E-value: 4.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 96 LFTLislqlFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLN 175
Cdd:MTH00020 119 LFTF-----LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLD 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 176 ---LFMMtywtqeLINSWSSNLMWVaCIMAF---MIKMPLYGFHLWLPKAH-----VEAPI-AGSMVLAAI--------L 235
Cdd:MTH00020 194 fssVFNM------VVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVfllirsspL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 236 LKLGGYGMMRITIIlNPLTKFMAYPFLMVclwgmvmtsliclrQTDLKSLIAYSSVSHMALVVVAILIQtpwSFMGATTL 315
Cdd:MTH00020 267 FEQAPLALIIVTIV-GSLTVFFAATVGLV--------------QNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFH 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 316 MIAHGLTSSMLFCLANSNYERIHN-RTMLLARGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELFITMASFSWS 389
Cdd:MTH00020 329 LMNHAFFKALLFLSAGSVIHALSDeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPyltgfYSKDLILELAFGQYYLIFA 408
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 390 NMtiiLTGLNMLITATYSLHMLMMTQRGKPPYHAHNFKPSLTRENTLmsmhVFPLLLLTL 449
Cdd:MTH00020 409 YW---LGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNL----LLPLGILAL 461
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
8.79e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.95 E-value: 8.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 59 DPLSSPLLILAMWLFPLTVMASQYHLAKEPweRKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDP--HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 139 QTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLF----------MMTYWTQELINSWSSNLMWVACIMAFMI--- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLtfnggsvgsgIMDRGYYGGGAYESPLAPFAIIGILLLIgci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 206 -KMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITiilnPLTKFMAYPFLMVCLWGMV---MTSLICLRQTD 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 282 LKSLIAYSSVSHMALVVVAILIQTpwSFMGATTLMIAHGLTSSMLFCLANS--NYERIHNRTMLLARGLQSLLPLMSTWW 359
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGSviHSTTVDEQDMRKMGGLIHSIPFTYTMM 390
|
330 340 350
....*....|....*....|....*....|....
gi 311088387 360 LLASLTNLALPPSINLIGELFITMASFSWSNMTI 393
Cdd:MTH00032 391 LIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
212-323 |
8.84e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.81 E-value: 8.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 212 FHLWLPKAHVEAPIAGSMVLAAILlKLGGYGM-MRI-TIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYS 289
Cdd:PRK05777 223 FHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
90 100 110
....*....|....*....|....*....|....
gi 311088387 290 SVSHMALVVVAILIQTPWSFMGATTLMIAHGLTS 323
Cdd:PRK05777 302 SIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
80-327 |
1.27e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 44.56 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 80 SQYHLAKEPweRKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00211 99 SLWYMSSEP--NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 160 LLVALssiqnYMGTLNLFMMTYwTQELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAhVEAPIAGS-------MVLA 232
Cdd:MTH00211 177 LLLSM-----VWLLLNLNSWEI-SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 233 AILLklggygMMRitiiLNPLTKFMAYPFLMVCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVVVAI-LIQTPWS 308
Cdd:MTH00211 250 GVFL------LIR----LSPLFQNNQLILGAVLLLGaltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLgLNQPQLA 319
|
250
....*....|....*....
gi 311088387 309 FMgattLMIAHGLTSSMLF 327
Cdd:MTH00211 320 FL----HICTHAFFKAMLF 334
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
107-327 |
2.47e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 43.10 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 107 ILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGL-YFLFYTLVGSLPLL-VALSSIQNYMGTLNLFMMTYWTQ 184
Cdd:MTH00196 7 LCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVLNSG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 185 ELINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAgSMVLAAILLKLGgygMMRITIILNPLTKFmaypFLMV 264
Cdd:MTH00196 87 QSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLG---IFSILVSIGLNVNI----LLIG 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088387 265 CLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:MTH00196 159 GLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
89-364 |
3.40e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.86 E-value: 3.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 89 WERKKHFLFTLISLQ-LFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTErlnAGLYFLFYTLVGSLPLLVALSSI 167
Cdd:PRK06459 67 YDHYGKWLSSLYILTiLGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 168 QNYMGTLNLfmmtywtqeliNSWSSNLMWVACIMAFMIKMPLYGFHL--WLPKAHVEAPIAGSMVLAAILLKLGGYGMMR 245
Cdd:PRK06459 144 FIISGTTNF-----------SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILK 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 246 ITIILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAI--------LIQTPWSFMGATTLM 316
Cdd:PRK06459 213 MTILTQTIpIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVIL 292
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 311088387 317 --IAHGLTSSMLFC------------LANSNYERIHNRTMLLARGLQSLLPL---MSTWWLLASL 364
Cdd:PRK06459 293 ysFAHSVAKTGLFLssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
115-298 |
8.92e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 41.83 E-value: 8.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 115 LIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSSIQNYMGTLNLFMMTYWTQELINSWSSNL 194
Cdd:PRK12645 132 LIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQNSPLFIP 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 195 MWVACIMAFMIKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITiilnPLTKFMAYPFLMVCLWGMVM-- 271
Cdd:PRK12645 212 AMILILLGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLITlf 286
|
170 180
....*....|....*....|....*...
gi 311088387 272 -TSLICLRQTDLKSLIAYSSVSHMALVV 298
Cdd:PRK12645 287 wGSLNAVKQTDLKGILAFSTVSQLGLIM 314
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
95-455 |
1.87e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 40.34 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 95 FLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALssiqnymgtL 174
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGL---------L 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 175 NLFMMTYWTqelINSWSSNLMWVACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAIlLKLGGYgMMRITIILNPLT 254
Cdd:MTH00200 77 NAWTSGQWG---ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTW-QKLAPF-ALLIQLAPALNS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 255 KFMAYPFLMVCLWGmvmtSLICLRQTDLKSLIAYSSVSHMALVVVAILIQtpwSFMGATTLMIAHGLTSSMLFCLANSNY 334
Cdd:MTH00200 152 NILLLLGLLSVLVG----GWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS---PNLALLYLLLYVIITLTVFLLLNLLNS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 335 ERIHNRTMLLARGlqsllPLMSTWWLLASLTNLALPPSINLIGELFITMA----SFSWSNMTIILTGLNMLITATYSLHM 410
Cdd:MTH00200 225 TKINSLSSSKTKN-----PILSMLLGLTLLSLGGLPPLTGFFPKWLILQElskqGLFIYATILLLGSLLSLFFYLRLSYL 299
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 311088387 411 LMMTQRGKPPYHAHNFKPSLTRENTLMSMHVFPLLLLTLNPKILM 455
Cdd:MTH00200 300 TLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
188-398 |
9.35e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 37.94 E-value: 9.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 188 NSWSSNLMWVACiMAFMIKMPLYGFHLWLPKAHVEAPIAGSMVLAAILlKLGGYGMMritIILNPLTkFMAYPFLMVCLW 267
Cdd:MTH00144 80 LSFSWFSMSLLL-LGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLL---SNFLDLY-WLAYLLCVISVL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088387 268 GMVMTSLICLRQTDLKSLIAYSSVSHMALVVVAILIqTPWSFMgaTTLMIAHGLTSSMLFCLANSNyerihnrTMLLARG 347
Cdd:MTH00144 154 SALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH-GSWLMW--MYFLIYIVSSGFLFFSLWSGD-------SGSMKDL 223
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 311088387 348 LQSLLPLMSTWWLLASLTNLA-LPPSINLIGELFITMASFSWSNMTIILTGL 398
Cdd:MTH00144 224 GSLKPSYKTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLL 275
|
|
| |
